RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 GAGE12JA6NER3 117 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 H7C1H1 209 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 ATP5LO75964 103 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 PRSS1P07477 247 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 LINC00694P0DN24 101 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 DEFB130BP0DP73 79 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 DEFB130AP0DP74 79 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 UBE2D3P61077 147 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 UBE2D2P62837 147 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 GAGE1Q13065 139 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 GAGE4Q13068 117 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 GAGE5Q13069 117 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 RHOHQ15669 191 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 FAM222AQ5U5X8 452 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 CEMP1Q6PRD7 247 aaPredicted RBP4.01□□□□□ -1.77
SF3B3-210ENST00000567654 NTM-AS1Q6ZSK4 140 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 STPG4Q8N801 248 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 C20orf203Q8NBC4 194 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 RNF183Q96D59 192 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 DNAJC30Q96LL9 226 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 KIR2DL4Q99706 377 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 ZMAT5Q9UDW3 170 aaKnown RBP4.01□□□□□ -1.77
SF3B3-210ENST00000567654 CYSLTR1Q9Y271 337 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 PRKDCP78527 4128 aaKnown RBP4.01□□□□□ -1.77
SF3B3-210ENST00000567654 IGLV4-69A0A075B6H9 119 aa4□□□□□ -1.77
SF3B3-210ENST00000567654 IGLV4-3A0A075B6K6 122 aa4□□□□□ -1.77
SF3B3-210ENST00000567654 SMIM9A6NGZ8 99 aa4□□□□□ -1.77
SF3B3-210ENST00000567654 A8MZ25 164 aa4□□□□□ -1.77
SF3B3-210ENST00000567654 F8VRH5 84 aa4□□□□□ -1.77
SF3B3-210ENST00000567654 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4□□□□□ -1.77
SF3B3-210ENST00000567654 FGF6P10767 208 aa4□□□□□ -1.77
SF3B3-210ENST00000567654 RNASE13Q5GAN3 156 aaKnown RBP4□□□□□ -1.77
SF3B3-210ENST00000567654 Q6ZN92 141 aa4□□□□□ -1.77
SF3B3-210ENST00000567654 ERASQ7Z444 233 aa4□□□□□ -1.77
SF3B3-210ENST00000567654 SBSPONQ8IVN8 264 aa4□□□□□ -1.77
SF3B3-210ENST00000567654 TIMM17AQ99595 171 aa4□□□□□ -1.77
SF3B3-210ENST00000567654 MIEN1Q9BRT3 115 aa4□□□□□ -1.77
SF3B3-210ENST00000567654 TTTY13Q9BZ97 58 aa4□□□□□ -1.77
SF3B3-210ENST00000567654 HHLA3Q9XRX5 114 aa4□□□□□ -1.77
SF3B3-210ENST00000567654 CHTOPQ9Y3Y2 248 aaKnown RBP4□□□□□ -1.77
SF3B3-210ENST00000567654 PLECQ15149 4684 aaKnown RBP4□□□□□ -1.77
SF3B3-210ENST00000567654 DNAH7Q8WXX0 4024 aa3.99□□□□□ -1.77
SF3B3-210ENST00000567654 TRBV7-3A0A075B6L6 115 aa3.99□□□□□ -1.77
SF3B3-210ENST00000567654 TRAV12-1A0A0B4J245 112 aa3.99□□□□□ -1.77
SF3B3-210ENST00000567654 TRGV4A0A0C4DH28 118 aa3.99□□□□□ -1.77
SF3B3-210ENST00000567654 TRBV10-1A0A0K0K1A3 114 aa3.99□□□□□ -1.77
SF3B3-210ENST00000567654 TRBV6-4A0A1B0GX49 114 aa3.99□□□□□ -1.77
SF3B3-210ENST00000567654 C11orf86A6NJI1 115 aa3.99□□□□□ -1.77
SF3B3-210ENST00000567654 DPM2O94777 84 aa3.99□□□□□ -1.77
SF3B3-210ENST00000567654 IGKCP01834 107 aa3.99□□□□□ -1.77
SF3B3-210ENST00000567654 CRYBA4P53673 196 aa3.99□□□□□ -1.77
SF3B3-210ENST00000567654 Q6ZUT4 128 aa3.99□□□□□ -1.77
SF3B3-210ENST00000567654 C2orf91Q6ZV80 131 aa3.99□□□□□ -1.77
SF3B3-210ENST00000567654 PCP2Q8IVA1 136 aa3.99□□□□□ -1.77
SF3B3-210ENST00000567654 UBE2D4Q9Y2X8 147 aa3.99□□□□□ -1.77
SF3B3-210ENST00000567654 NOTCH1P46531 2555 aa3.98□□□□□ -1.77
SF3B3-210ENST00000567654 LYRM9A8MSI8 78 aa3.98□□□□□ -1.77
SF3B3-210ENST00000567654 K7EIL1 84 aa3.98□□□□□ -1.77
SF3B3-210ENST00000567654 COX8AP10176 69 aa3.98□□□□□ -1.77
SF3B3-210ENST00000567654 MIFP14174 115 aa3.98□□□□□ -1.77
SF3B3-210ENST00000567654 CTAG1AP78358 180 aa3.98□□□□□ -1.77
SF3B3-210ENST00000567654 RPL36AP83881 106 aaKnown RBP3.98□□□□□ -1.77
SF3B3-210ENST00000567654 COTL1Q14019 142 aa3.98□□□□□ -1.77
SF3B3-210ENST00000567654 PMVKQ15126 192 aa3.98□□□□□ -1.77
SF3B3-210ENST00000567654 Q8N9P0 234 aaPredicted RBP3.98□□□□□ -1.77
SF3B3-210ENST00000567654 TMEM141Q96I45 108 aa3.98□□□□□ -1.77
SF3B3-210ENST00000567654 VSIG2Q96IQ7 327 aa3.98□□□□□ -1.77
SF3B3-210ENST00000567654 LYSTQ99698 3801 aa3.98□□□□□ -1.77
SF3B3-210ENST00000567654 SNHG12Q9BXW3 62 aa3.98□□□□□ -1.77
SF3B3-210ENST00000567654 CST9LQ9H4G1 147 aa3.98□□□□□ -1.77
SF3B3-210ENST00000567654 UQCR10Q9UDW1 63 aa3.98□□□□□ -1.77
SF3B3-210ENST00000567654 A0A096LPF7 62 aa3.97□□□□□ -1.77
SF3B3-210ENST00000567654 A0A0J9YXV3 536 aa3.97□□□□□ -1.77
SF3B3-210ENST00000567654 A0A0J9YY99 117 aa3.97□□□□□ -1.77
SF3B3-210ENST00000567654 NMUP48645 174 aa3.97□□□□□ -1.77
SF3B3-210ENST00000567654 HNRNPA3P51991 378 aaKnown RBP3.97□□□□□ -1.77
SF3B3-210ENST00000567654 DEFA6Q01524 100 aa3.97□□□□□ -1.77
SF3B3-210ENST00000567654 MAPKAPK5-AS1Q8N8E1 139 aa3.97□□□□□ -1.77
SF3B3-210ENST00000567654 AMELXQ99217 191 aa3.97□□□□□ -1.77
SF3B3-210ENST00000567654 PYGO1Q9Y3Y4 419 aa3.97□□□□□ -1.77
SF3B3-210ENST00000567654 STARD9Q9P2P6 4700 aa3.96□□□□□ -1.77
SF3B3-210ENST00000567654 DNAH10Q8IVF4 4471 aa3.96□□□□□ -1.77
SF3B3-210ENST00000567654 HSBP1L1C9JCN9 74 aa3.96□□□□□ -1.78
SF3B3-210ENST00000567654 CIDEAO60543 219 aa3.96□□□□□ -1.78
SF3B3-210ENST00000567654 PLNP26678 52 aa3.96□□□□□ -1.78
SF3B3-210ENST00000567654 TSPEAR-AS2P59090 65 aa3.96□□□□□ -1.78
SF3B3-210ENST00000567654 DAD1P61803 113 aa3.96□□□□□ -1.78
SF3B3-210ENST00000567654 C12orf74Q32Q52 190 aa3.96□□□□□ -1.78
SF3B3-210ENST00000567654 KPRPQ5T749 579 aaPredicted RBP3.96□□□□□ -1.78
SF3B3-210ENST00000567654 SLC25A34Q6PIV7 304 aa3.96□□□□□ -1.78
SF3B3-210ENST00000567654 DAZ4Q86SG3 579 aaKnown RBP3.96□□□□□ -1.78
SF3B3-210ENST00000567654 BOD1L2Q8IYS8 172 aa3.96□□□□□ -1.78
SF3B3-210ENST00000567654 DAZ3Q9NR90 486 aaKnown RBP3.96□□□□□ -1.78
SF3B3-210ENST00000567654 COL7A1Q02388 2944 aa3.96□□□□□ -1.78
SF3B3-210ENST00000567654 NBEAL1Q6ZS30 2694 aa3.96□□□□□ -1.78
SF3B3-210ENST00000567654 TRAV26-1A0A087WT03 109 aa3.95□□□□□ -1.78
SF3B3-210ENST00000567654 A0A0J9YWU9 116 aa3.95□□□□□ -1.78
SF3B3-210ENST00000567654 LINC01549A6NIU2 74 aa3.95□□□□□ -1.78
SF3B3-210ENST00000567654 SPART-AS1P0CW21 52 aa3.95□□□□□ -1.78
SF3B3-210ENST00000567654 HTN3P15516 51 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms