RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 TRAV8-4A0A0B4J246 113 aa8.15□□□□□ -1.1
SF3B3-208ENST00000567250 ORMDL2Q53FV1 153 aa8.15□□□□□ -1.1
SF3B3-208ENST00000567250 CLPSL2Q6UWE3 100 aa8.15□□□□□ -1.1
SF3B3-208ENST00000567250 YPEL4Q96NS1 127 aa8.15□□□□□ -1.1
SF3B3-208ENST00000567250 CSDC2Q9Y534 153 aaKnown RBP8.15□□□□□ -1.1
SF3B3-208ENST00000567250 G0S2P27469 103 aa8.14□□□□□ -1.11
SF3B3-208ENST00000567250 ENHOQ6UWT2 76 aa8.14□□□□□ -1.11
SF3B3-208ENST00000567250 ALKBH7Q9BT30 221 aaPredicted RBP8.14□□□□□ -1.11
SF3B3-208ENST00000567250 TIMM21Q9BVV7 248 aa8.14□□□□□ -1.11
SF3B3-208ENST00000567250 IFI27P40305 119 aaPredicted RBP8.13□□□□□ -1.11
SF3B3-208ENST00000567250 PRSS3P2Q8NHM4 247 aa8.13□□□□□ -1.11
SF3B3-208ENST00000567250 SPANXA1Q9NS26 97 aa8.13□□□□□ -1.11
SF3B3-208ENST00000567250 UBE2D4Q9Y2X8 147 aa8.13□□□□□ -1.11
SF3B3-208ENST00000567250 DNAH2Q9P225 4427 aa8.13□□□□□ -1.11
SF3B3-208ENST00000567250 CYSLTR1Q9Y271 337 aa8.12□□□□□ -1.11
SF3B3-208ENST00000567250 A0A087WTM6 91 aa8.11□□□□□ -1.11
SF3B3-208ENST00000567250 A0A1B0GVY2 172 aa8.11□□□□□ -1.11
SF3B3-208ENST00000567250 LINC01549A6NIU2 74 aa8.11□□□□□ -1.11
SF3B3-208ENST00000567250 FA2HQ7L5A8 372 aa8.11□□□□□ -1.11
SF3B3-208ENST00000567250 DNAH10Q8IVF4 4471 aa8.11□□□□□ -1.11
SF3B3-208ENST00000567250 IGKV3OR2-268A0A0C4DH90 116 aa8.1□□□□□ -1.11
SF3B3-208ENST00000567250 RPL39P62891 51 aaKnown RBP8.1□□□□□ -1.11
SF3B3-208ENST00000567250 C2orf66Q6UXQ4 117 aa8.1□□□□□ -1.11
SF3B3-208ENST00000567250 ZNF664Q8N3J9 261 aa8.1□□□□□ -1.11
SF3B3-208ENST00000567250 CDC42SE2Q9NRR3 84 aa8.1□□□□□ -1.11
SF3B3-208ENST00000567250 IGLV10-54A0A075B6I4 117 aa8.09□□□□□ -1.11
SF3B3-208ENST00000567250 TMEM238LA0A1B0GVL6 79 aa8.09□□□□□ -1.11
SF3B3-208ENST00000567250 CCL25O15444 150 aa8.09□□□□□ -1.11
SF3B3-208ENST00000567250 S100A1P23297 94 aa8.09□□□□□ -1.11
SF3B3-208ENST00000567250 RAB5BP61020 215 aa8.09□□□□□ -1.11
SF3B3-208ENST00000567250 MRPS36P82909 103 aaKnown RBP8.09□□□□□ -1.11
SF3B3-208ENST00000567250 C14orf177Q52M58 125 aa8.09□□□□□ -1.11
SF3B3-208ENST00000567250 C18orf32Q8TCD1 76 aa8.09□□□□□ -1.11
SF3B3-208ENST00000567250 PYGO1Q9Y3Y4 419 aa8.09□□□□□ -1.11
SF3B3-208ENST00000567250 LRCOL1A6NCL2 159 aa8.08□□□□□ -1.12
SF3B3-208ENST00000567250 NPSP0C0P6 89 aa8.08□□□□□ -1.12
SF3B3-208ENST00000567250 SS18Q15532 418 aa8.08□□□□□ -1.12
SF3B3-208ENST00000567250 CDPF1Q6NVV7 123 aa8.08□□□□□ -1.12
SF3B3-208ENST00000567250 Q6ZN92 141 aa8.08□□□□□ -1.12
SF3B3-208ENST00000567250 Q6ZUT4 128 aa8.08□□□□□ -1.12
SF3B3-208ENST00000567250 AP5S1Q9NUS5 200 aa8.08□□□□□ -1.12
SF3B3-208ENST00000567250 HECTD4Q9Y4D8 3996 aa8.08□□□□□ -1.12
SF3B3-208ENST00000567250 LINC01546A6NGU7 62 aa8.07□□□□□ -1.12
SF3B3-208ENST00000567250 PAPPA-AS1Q5QFB9 102 aa8.07□□□□□ -1.12
SF3B3-208ENST00000567250 SPATA12Q7Z6I5 190 aa8.07□□□□□ -1.12
SF3B3-208ENST00000567250 NTN5Q8WTR8 489 aaPredicted RBP8.07□□□□□ -1.12
SF3B3-208ENST00000567250 DNAH17Q9UFH2 4485 aa8.07□□□□□ -1.12
SF3B3-208ENST00000567250 LINC00959A0A1B0GUT2 108 aa8.06□□□□□ -1.12
SF3B3-208ENST00000567250 C1orf196B1AJZ1 125 aa8.06□□□□□ -1.12
SF3B3-208ENST00000567250 TRGC2P03986 189 aa8.06□□□□□ -1.12
SF3B3-208ENST00000567250 TEX43Q6ZNM6 134 aa8.06□□□□□ -1.12
SF3B3-208ENST00000567250 Q8N814 137 aa8.06□□□□□ -1.12
SF3B3-208ENST00000567250 BAALCQ8WXS3 180 aa8.06□□□□□ -1.12
SF3B3-208ENST00000567250 CHCHD10Q8WYQ3 142 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-208ENST00000567250 TMEM141Q96I45 108 aa8.06□□□□□ -1.12
SF3B3-208ENST00000567250 C2orf88Q9BSF0 95 aa8.06□□□□□ -1.12
SF3B3-208ENST00000567250 FAT2Q9NYQ8 4349 aa8.05□□□□□ -1.12
SF3B3-208ENST00000567250 IFITM10A6NMD0 228 aa8.05□□□□□ -1.12
SF3B3-208ENST00000567250 COLCA2A8K830 154 aa8.05□□□□□ -1.12
SF3B3-208ENST00000567250 ATP6V1G1O75348 118 aa8.05□□□□□ -1.12
SF3B3-208ENST00000567250 LINC00614P0C842 121 aa8.05□□□□□ -1.12
SF3B3-208ENST00000567250 RNASE13Q5GAN3 156 aaKnown RBP8.05□□□□□ -1.12
SF3B3-208ENST00000567250 MAPKAPK5-AS1Q8N8E1 139 aa8.05□□□□□ -1.12
SF3B3-208ENST00000567250 TOMM6Q96B49 74 aa8.05□□□□□ -1.12
SF3B3-208ENST00000567250 TIMM17AQ99595 171 aa8.05□□□□□ -1.12
SF3B3-208ENST00000567250 IGLV4-3A0A075B6K6 122 aa8.04□□□□□ -1.12
SF3B3-208ENST00000567250 TRAV13-1A0A0B4J241 112 aa8.04□□□□□ -1.12
SF3B3-208ENST00000567250 GAGE12HA6NDE8 117 aa8.04□□□□□ -1.12
SF3B3-208ENST00000567250 C16orf90A8MZG2 172 aa8.04□□□□□ -1.12
SF3B3-208ENST00000567250 USP17L23D6RBM5 183 aa8.04□□□□□ -1.12
SF3B3-208ENST00000567250 LECT2O14960 151 aa8.04□□□□□ -1.12
SF3B3-208ENST00000567250 EIF4EBP3O60516 100 aaPredicted RBP8.04□□□□□ -1.12
SF3B3-208ENST00000567250 SCO1O75880 301 aa8.04□□□□□ -1.12
SF3B3-208ENST00000567250 XCL1P47992 114 aa8.04□□□□□ -1.12
SF3B3-208ENST00000567250 CFAP161Q6P656 301 aa8.04□□□□□ -1.12
SF3B3-208ENST00000567250 KRTAP26-1Q6PEX3 210 aa8.04□□□□□ -1.12
SF3B3-208ENST00000567250 CHCHD1Q96BP2 118 aaKnown RBP8.04□□□□□ -1.12
SF3B3-208ENST00000567250 IGLV5-52A0A0A0MRZ9 124 aa8.03□□□□□ -1.12
SF3B3-208ENST00000567250 HBDP02042 147 aa8.03□□□□□ -1.12
SF3B3-208ENST00000567250 CD164L2Q6UWJ8 174 aa8.03□□□□□ -1.12
SF3B3-208ENST00000567250 ERASQ7Z444 233 aa8.03□□□□□ -1.12
SF3B3-208ENST00000567250 SCGB3A1Q96QR1 104 aa8.03□□□□□ -1.12
SF3B3-208ENST00000567250 PKD1P98161 4303 aa8.03□□□□□ -1.12
SF3B3-208ENST00000567250 IGIPA6NJ69 53 aa8.02□□□□□ -1.13
SF3B3-208ENST00000567250 KRTAP10-2P60368 255 aa8.02□□□□□ -1.13
SF3B3-208ENST00000567250 WFDC2Q14508 124 aa8.02□□□□□ -1.13
SF3B3-208ENST00000567250 BAGE3Q86Y29 109 aa8.02□□□□□ -1.13
SF3B3-208ENST00000567250 OPRPNQ99935 248 aaPredicted RBP8.02□□□□□ -1.13
SF3B3-208ENST00000567250 VCX2Q9H322 139 aa8.02□□□□□ -1.13
SF3B3-208ENST00000567250 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.01□□□□□ -1.13
SF3B3-208ENST00000567250 FOXI1Q12951 378 aa8.01□□□□□ -1.13
SF3B3-208ENST00000567250 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8□□□□□ -1.13
SF3B3-208ENST00000567250 COX7A2LO14548 114 aa8□□□□□ -1.13
SF3B3-208ENST00000567250 HSBP1O75506 76 aa8□□□□□ -1.13
SF3B3-208ENST00000567250 APOMO95445 188 aa8□□□□□ -1.13
SF3B3-208ENST00000567250 MALP21145 153 aa8□□□□□ -1.13
SF3B3-208ENST00000567250 SEC11AP67812 179 aa8□□□□□ -1.13
SF3B3-208ENST00000567250 FAM104AQ969W3 186 aa8□□□□□ -1.13
SF3B3-208ENST00000567250 URB1-AS1Q96HZ7 61 aa8□□□□□ -1.13
SF3B3-208ENST00000567250 IGHV1-58A0A0C4DH39 117 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 309.2 ms