RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 C2orf91Q6ZV80 131 aa11.87□□□□□ -0.51
RAB40C-210ENST00000566290 UBE2D4Q9Y2X8 147 aa11.87□□□□□ -0.51
RAB40C-210ENST00000566290 TEX48A0A1B0GUV7 120 aa11.86□□□□□ -0.51
RAB40C-210ENST00000566290 E9PLD3 99 aa11.86□□□□□ -0.51
RAB40C-210ENST00000566290 FHL2Q14192 279 aa11.86□□□□□ -0.51
RAB40C-210ENST00000566290 RNF183Q96D59 192 aa11.86□□□□□ -0.51
RAB40C-210ENST00000566290 ZNRF2Q8NHG8 242 aa11.85□□□□□ -0.51
RAB40C-210ENST00000566290 PRADC1Q9BSG0 188 aa11.85□□□□□ -0.51
RAB40C-210ENST00000566290 Q9UF83 564 aa11.85□□□□□ -0.51
RAB40C-210ENST00000566290 HERVK_113P61574 105 aa11.84□□□□□ -0.51
RAB40C-210ENST00000566290 FAM104AQ969W3 186 aa11.84□□□□□ -0.51
RAB40C-210ENST00000566290 RYR1P21817 5038 aa11.83□□□□□ -0.52
RAB40C-210ENST00000566290 TRGV4A0A0C4DH28 118 aa11.83□□□□□ -0.52
RAB40C-210ENST00000566290 COL5A1-AS1Q5SY13 56 aa11.83□□□□□ -0.52
RAB40C-210ENST00000566290 Q8NAQ8 132 aa11.83□□□□□ -0.52
RAB40C-210ENST00000566290 VCX2Q9H322 139 aa11.83□□□□□ -0.52
RAB40C-210ENST00000566290 IGKV2D-26A0A0A0MRZ7 120 aa11.82□□□□□ -0.52
RAB40C-210ENST00000566290 NMUP48645 174 aa11.82□□□□□ -0.52
RAB40C-210ENST00000566290 FAM19A3Q7Z5A8 133 aa11.82□□□□□ -0.52
RAB40C-210ENST00000566290 OR11H2Q8NH07 326 aa11.82□□□□□ -0.52
RAB40C-210ENST00000566290 HSD52Q0P140 79 aa11.81□□□□□ -0.52
RAB40C-210ENST00000566290 DEFB135Q30KP9 77 aa11.81□□□□□ -0.52
RAB40C-210ENST00000566290 ZFAND6Q6FIF0 208 aa11.81□□□□□ -0.52
RAB40C-210ENST00000566290 ZNF25P17030 456 aaPredicted RBP11.8□□□□□ -0.52
RAB40C-210ENST00000566290 PCP2Q8IVA1 136 aa11.8□□□□□ -0.52
RAB40C-210ENST00000566290 PRO0255Q9UI72 69 aa11.8□□□□□ -0.52
RAB40C-210ENST00000566290 PLECQ15149 4684 aaKnown RBP11.8□□□□□ -0.52
RAB40C-210ENST00000566290 IGHV4-28A0A0C4DH34 117 aa11.79□□□□□ -0.52
RAB40C-210ENST00000566290 SEC11AP67812 179 aa11.79□□□□□ -0.52
RAB40C-210ENST00000566290 TAL2Q16559 108 aa11.79□□□□□ -0.52
RAB40C-210ENST00000566290 NTM-AS1Q6ZSK4 140 aa11.79□□□□□ -0.52
RAB40C-210ENST00000566290 PHLDA1Q8WV24 401 aaPredicted RBP11.79□□□□□ -0.52
RAB40C-210ENST00000566290 TM2D3Q9BRN9 247 aa11.79□□□□□ -0.52
RAB40C-210ENST00000566290 CHAC1Q9BUX1 264 aa11.79□□□□□ -0.52
RAB40C-210ENST00000566290 TINCRA0A1B0GVN0 87 aa11.78□□□□□ -0.52
RAB40C-210ENST00000566290 GAGE12JA6NER3 117 aa11.78□□□□□ -0.52
RAB40C-210ENST00000566290 GAGE1Q13065 139 aa11.78□□□□□ -0.52
RAB40C-210ENST00000566290 GAGE4Q13068 117 aa11.78□□□□□ -0.52
RAB40C-210ENST00000566290 GAGE5Q13069 117 aa11.78□□□□□ -0.52
RAB40C-210ENST00000566290 GAGE13Q4V321 117 aa11.78□□□□□ -0.52
RAB40C-210ENST00000566290 BVES-AS1Q5T3Y7 98 aa11.78□□□□□ -0.52
RAB40C-210ENST00000566290 FAM222AQ5U5X8 452 aa11.78□□□□□ -0.52
RAB40C-210ENST00000566290 TMEM243Q9BU79 118 aa11.78□□□□□ -0.52
RAB40C-210ENST00000566290 TRBV25-1A0A075B6N4 114 aa11.77□□□□□ -0.53
RAB40C-210ENST00000566290 IGLV5-45A0A087WSX0 123 aa11.77□□□□□ -0.53
RAB40C-210ENST00000566290 MPV17L2Q567V2 206 aa11.77□□□□□ -0.53
RAB40C-210ENST00000566290 TRAV26-1A0A087WT03 109 aa11.76□□□□□ -0.53
RAB40C-210ENST00000566290 IGHV3-38A0A0C4DH36 116 aa11.76□□□□□ -0.53
RAB40C-210ENST00000566290 TMEM223A0PJW6 202 aa11.76□□□□□ -0.53
RAB40C-210ENST00000566290 SPART-AS1P0CW21 52 aa11.76□□□□□ -0.53
RAB40C-210ENST00000566290 ZNF22P17026 224 aaPredicted RBP11.76□□□□□ -0.53
RAB40C-210ENST00000566290 TIRAPP58753 221 aa11.76□□□□□ -0.53
RAB40C-210ENST00000566290 RETNQ9HD89 108 aa11.76□□□□□ -0.53
RAB40C-210ENST00000566290 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.75□□□□□ -0.53
RAB40C-210ENST00000566290 MYMXA0A1B0GTQ4 84 aa11.75□□□□□ -0.53
RAB40C-210ENST00000566290 IGKV2-29A2NJV5 120 aaPredicted RBP11.75□□□□□ -0.53
RAB40C-210ENST00000566290 DEFB130BP0DP73 79 aa11.75□□□□□ -0.53
RAB40C-210ENST00000566290 DEFB130AP0DP74 79 aa11.75□□□□□ -0.53
RAB40C-210ENST00000566290 UBE2D1P51668 147 aa11.75□□□□□ -0.53
RAB40C-210ENST00000566290 Q6ZUT4 128 aa11.75□□□□□ -0.53
RAB40C-210ENST00000566290 OPRPNQ99935 248 aaPredicted RBP11.75□□□□□ -0.53
RAB40C-210ENST00000566290 C11orf68Q9H3H3 251 aaKnown RBP11.75□□□□□ -0.53
RAB40C-210ENST00000566290 TP73-AS1Q9UF72 201 aa11.75□□□□□ -0.53
RAB40C-210ENST00000566290 TRBV6-8A0A0A6YYG3 113 aa11.74□□□□□ -0.53
RAB40C-210ENST00000566290 ATP5G1P05496 136 aa11.74□□□□□ -0.53
RAB40C-210ENST00000566290 HINT1P49773 126 aaPredicted RBP11.74□□□□□ -0.53
RAB40C-210ENST00000566290 EMP1P54849 157 aa11.74□□□□□ -0.53
RAB40C-210ENST00000566290 LEPROTO15243 131 aa11.73□□□□□ -0.53
RAB40C-210ENST00000566290 DAD1P61803 113 aa11.73□□□□□ -0.53
RAB40C-210ENST00000566290 DGAT2L7PQ6IED9 249 aa11.73□□□□□ -0.53
RAB40C-210ENST00000566290 SH2D6Q7Z4S9 175 aa11.73□□□□□ -0.53
RAB40C-210ENST00000566290 DEFB104AQ8WTQ1 72 aa11.73□□□□□ -0.53
RAB40C-210ENST00000566290 PLEKHB2Q96CS7 222 aa11.73□□□□□ -0.53
RAB40C-210ENST00000566290 FRAS1Q86XX4 4008 aa11.72□□□□□ -0.53
RAB40C-210ENST00000566290 A0A0J9YXV3 536 aa11.72□□□□□ -0.53
RAB40C-210ENST00000566290 TMEM170BQ5T4T1 132 aa11.72□□□□□ -0.53
RAB40C-210ENST00000566290 TM2D2Q9BX73 214 aa11.72□□□□□ -0.53
RAB40C-210ENST00000566290 CDC42SE2Q9NRR3 84 aa11.72□□□□□ -0.53
RAB40C-210ENST00000566290 TRAV8-6A0A0B4J262 113 aa11.71□□□□□ -0.53
RAB40C-210ENST00000566290 MAPKAPK5-AS1Q8N8E1 139 aa11.71□□□□□ -0.53
RAB40C-210ENST00000566290 OR5A1Q8NGJ0 315 aa11.71□□□□□ -0.53
RAB40C-210ENST00000566290 ATP6V0E2Q8NHE4 81 aa11.71□□□□□ -0.53
RAB40C-210ENST00000566290 ORAOV1Q8WV07 137 aa11.71□□□□□ -0.53
RAB40C-210ENST00000566290 SPATA25Q9BR10 227 aa11.71□□□□□ -0.53
RAB40C-210ENST00000566290 LOC100131303A0A0U1RQF7 123 aa11.7□□□□□ -0.54
RAB40C-210ENST00000566290 H3BNG1 76 aa11.7□□□□□ -0.54
RAB40C-210ENST00000566290 J3QQQ9 107 aa11.7□□□□□ -0.54
RAB40C-210ENST00000566290 HERVK_113P63121 156 aa11.7□□□□□ -0.54
RAB40C-210ENST00000566290 BATFQ16520 125 aa11.7□□□□□ -0.54
RAB40C-210ENST00000566290 CEMP1Q6PRD7 247 aaPredicted RBP11.7□□□□□ -0.54
RAB40C-210ENST00000566290 TMEM101Q96IK0 257 aa11.7□□□□□ -0.54
RAB40C-210ENST00000566290 A0A1B0GV90 55 aa11.69□□□□□ -0.54
RAB40C-210ENST00000566290 A6NDN8 102 aa11.69□□□□□ -0.54
RAB40C-210ENST00000566290 UBE2L6O14933 153 aa11.69□□□□□ -0.54
RAB40C-210ENST00000566290 GYPEP15421 78 aa11.69□□□□□ -0.54
RAB40C-210ENST00000566290 SPANXB1Q9NS25 103 aaPredicted RBP11.69□□□□□ -0.54
RAB40C-210ENST00000566290 A0A1B0GUV1 79 aa11.68□□□□□ -0.54
RAB40C-210ENST00000566290 ZNF815PA8K554 130 aa11.68□□□□□ -0.54
RAB40C-210ENST00000566290 H3BRM9 83 aa11.68□□□□□ -0.54
RAB40C-210ENST00000566290 PAX4O43316 350 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms