RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 C5orf17Q8NAS9 161 aa2.05□□□□□ -2.08
CNOT1-209ENST00000566240 RABAC1Q9UI14 185 aa2.05□□□□□ -2.08
CNOT1-209ENST00000566240 ZFHX2Q9C0A1 2572 aaPredicted RBP2.05□□□□□ -2.08
CNOT1-209ENST00000566240 ACACAQ13085 2346 aa2.05□□□□□ -2.08
CNOT1-209ENST00000566240 MUC6Q6W4X9 2439 aa2.05□□□□□ -2.08
CNOT1-209ENST00000566240 TRBV7-1A0A0A6YYK4 115 aa2.04□□□□□ -2.08
CNOT1-209ENST00000566240 CNOT1A5YKK6 2376 aaKnown RBP2.04□□□□□ -2.08
CNOT1-209ENST00000566240 H3BUA1 57 aa2.04□□□□□ -2.08
CNOT1-209ENST00000566240 TRIOO75962 3097 aa2.04□□□□□ -2.08
CNOT1-209ENST00000566240 APELAP0DMC3 54 aa2.04□□□□□ -2.08
CNOT1-209ENST00000566240 RPL35P42766 123 aaKnown RBP2.04□□□□□ -2.08
CNOT1-209ENST00000566240 RAB4BP61018 213 aa2.04□□□□□ -2.08
CNOT1-209ENST00000566240 S100A12P80511 92 aa2.04□□□□□ -2.08
CNOT1-209ENST00000566240 WT1-ASQ06250 92 aa2.04□□□□□ -2.08
CNOT1-209ENST00000566240 PDE6HQ13956 83 aa2.04□□□□□ -2.08
CNOT1-209ENST00000566240 Q1T7F1 81 aa2.04□□□□□ -2.08
CNOT1-209ENST00000566240 Q6AWC8 147 aa2.04□□□□□ -2.08
CNOT1-209ENST00000566240 C10orf126Q8N4M7 172 aa2.04□□□□□ -2.08
CNOT1-209ENST00000566240 C10orf105Q8TEF2 133 aa2.04□□□□□ -2.08
CNOT1-209ENST00000566240 ZNF625Q96I27 306 aaPredicted RBP2.04□□□□□ -2.08
CNOT1-209ENST00000566240 SLC50A1Q9BRV3 221 aa2.04□□□□□ -2.08
CNOT1-209ENST00000566240 OTORQ9NRC9 128 aa2.04□□□□□ -2.08
CNOT1-209ENST00000566240 TMEM14CQ9P0S9 112 aa2.04□□□□□ -2.08
CNOT1-209ENST00000566240 SOX21Q9Y651 276 aaPredicted RBP2.04□□□□□ -2.08
CNOT1-209ENST00000566240 EP300Q09472 2414 aaPredicted RBP2.03□□□□□ -2.08
CNOT1-209ENST00000566240 PTPRQQ9UMZ3 2332 aa2.03□□□□□ -2.08
CNOT1-209ENST00000566240 USF3Q68DE3 2245 aa2.03□□□□□ -2.08
CNOT1-209ENST00000566240 NBEAP1P0C6P0 100 aa2.03□□□□□ -2.08
CNOT1-209ENST00000566240 IGLC1P0CG04 106 aa2.03□□□□□ -2.08
CNOT1-209ENST00000566240 NDUFA6P56556 154 aa2.03□□□□□ -2.08
CNOT1-209ENST00000566240 TPPP2P59282 170 aa2.03□□□□□ -2.08
CNOT1-209ENST00000566240 RHOGP84095 191 aa2.03□□□□□ -2.08
CNOT1-209ENST00000566240 DIAPH2-AS1Q14236 149 aa2.03□□□□□ -2.08
CNOT1-209ENST00000566240 SMIM15Q7Z3B0 74 aa2.03□□□□□ -2.08
CNOT1-209ENST00000566240 Q86TA4 180 aa2.03□□□□□ -2.08
CNOT1-209ENST00000566240 BAGE2Q86Y30 109 aa2.03□□□□□ -2.08
CNOT1-209ENST00000566240 OR8I2Q8N0Y5 310 aa2.03□□□□□ -2.08
CNOT1-209ENST00000566240 TTC9CQ8N5M4 171 aa2.03□□□□□ -2.08
CNOT1-209ENST00000566240 OR4B1Q8NGF8 309 aa2.03□□□□□ -2.08
CNOT1-209ENST00000566240 USMG5Q96IX5 58 aa2.03□□□□□ -2.08
CNOT1-209ENST00000566240 HIST1H2BLQ99880 126 aa2.03□□□□□ -2.08
CNOT1-209ENST00000566240 FAM103A1Q9BTL3 118 aaKnown RBP2.03□□□□□ -2.08
CNOT1-209ENST00000566240 NAT8BQ9UHF3 227 aa2.03□□□□□ -2.08
CNOT1-209ENST00000566240 EPDR1Q9UM22 224 aa2.03□□□□□ -2.08
CNOT1-209ENST00000566240 COL6A3P12111 3177 aa2.03□□□□□ -2.08
CNOT1-209ENST00000566240 APC2O95996 2303 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 PTPRZ1P23471 2315 aaPredicted RBP2.02□□□□□ -2.09
CNOT1-209ENST00000566240 PLCE1Q9P212 2302 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 CADP27708 2225 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 LOC105371267A0A1B0GV96 52 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 C20orf202A1L168 122 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 OR2T8A6NH00 312 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 TSTD3H0UI37 97 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 H3BUX3 64 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 I3L2K1 104 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 J3QKU1 62 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 GGCTO75223 188 aaKnown RBP2.02□□□□□ -2.09
CNOT1-209ENST00000566240 CRPP02741 224 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 TRGC2P03986 189 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 TCRAP04437 139 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 PYYP10082 97 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 HBBP68871 147 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 PRB3Q04118 309 aaPredicted RBP2.02□□□□□ -2.09
CNOT1-209ENST00000566240 TMEM78Q5T7P6 136 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 BAGE3Q86Y29 109 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 C5orf56Q8N8D9 126 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 OR13C6PQ8NH95 151 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 C12orf57Q99622 126 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 IMUPQ9GZP8 106 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 ZFP30Q9Y2G7 519 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 DNAH14Q0VDD8 3507 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 BDP1A6H8Y1 2624 aa2.02□□□□□ -2.09
CNOT1-209ENST00000566240 TTC28Q96AY4 2481 aa2.01□□□□□ -2.09
CNOT1-209ENST00000566240 POLEQ07864 2286 aa2.01□□□□□ -2.09
CNOT1-209ENST00000566240 TRBV6-1A0A0K0K1D8 114 aa2.01□□□□□ -2.09
CNOT1-209ENST00000566240 K7EIM0 57 aa2.01□□□□□ -2.09
CNOT1-209ENST00000566240 NDUFA4O00483 81 aa2.01□□□□□ -2.09
CNOT1-209ENST00000566240 NDUFC2O95298 119 aa2.01□□□□□ -2.09
CNOT1-209ENST00000566240 CXCL1P09341 107 aa2.01□□□□□ -2.09
CNOT1-209ENST00000566240 FABP4P15090 132 aa2.01□□□□□ -2.09
CNOT1-209ENST00000566240 GNG5P63218 68 aa2.01□□□□□ -2.09
CNOT1-209ENST00000566240 IQCJQ1A5X6 159 aa2.01□□□□□ -2.09
CNOT1-209ENST00000566240 RRN3P1Q2M238 152 aa2.01□□□□□ -2.09
CNOT1-209ENST00000566240 DEFB113Q30KQ7 82 aa2.01□□□□□ -2.09
CNOT1-209ENST00000566240 FP248Q71RG6 208 aaPredicted RBP2.01□□□□□ -2.09
CNOT1-209ENST00000566240 Q8N6K4 173 aa2.01□□□□□ -2.09
CNOT1-209ENST00000566240 TSKUQ8WUA8 353 aa2.01□□□□□ -2.09
CNOT1-209ENST00000566240 SS18L2Q9UHA2 77 aa2.01□□□□□ -2.09
CNOT1-209ENST00000566240 UFC1Q9Y3C8 167 aa2.01□□□□□ -2.09
CNOT1-209ENST00000566240 GVINP1Q7Z2Y8 2422 aa2.01□□□□□ -2.09
CNOT1-209ENST00000566240 CEP250Q9BV73 2442 aa2.01□□□□□ -2.09
CNOT1-209ENST00000566240 WDR87Q6ZQQ6 2873 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 VPS13AQ96RL7 3174 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 FN1P02751 2386 aaKnown RBP2□□□□□ -2.09
CNOT1-209ENST00000566240 TRGV2A0A075B6R0 118 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 TRAV5A0A0B4J249 113 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 TMEM189A5PLL7 270 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 RBAKDNA6NC62 111 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 HIGD1CA8MV81 97 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms