RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 PKIAP61925 76 aa12.34□□□□□ -0.43
SPSB3-207ENST00000565550 BTF3L4Q96K17 158 aa12.34□□□□□ -0.43
SPSB3-207ENST00000565550 Q0VG73 95 aa12.33□□□□□ -0.44
SPSB3-207ENST00000565550 CHAC1Q9BUX1 264 aa12.33□□□□□ -0.44
SPSB3-207ENST00000565550 PRR34Q9NV39 138 aa12.33□□□□□ -0.44
SPSB3-207ENST00000565550 IGLV10-54A0A075B6I4 117 aa12.32□□□□□ -0.44
SPSB3-207ENST00000565550 KRTAP29-1A8MX34 341 aaPredicted RBP12.32□□□□□ -0.44
SPSB3-207ENST00000565550 ESDP10768 282 aa12.32□□□□□ -0.44
SPSB3-207ENST00000565550 S100PP25815 95 aa12.32□□□□□ -0.44
SPSB3-207ENST00000565550 REG3AQ06141 175 aa12.32□□□□□ -0.44
SPSB3-207ENST00000565550 SMCO4Q9NRQ5 59 aa12.32□□□□□ -0.44
SPSB3-207ENST00000565550 TRAV9-1A0A075B6T8 112 aa12.31□□□□□ -0.44
SPSB3-207ENST00000565550 A0A1B0GUV1 79 aa12.31□□□□□ -0.44
SPSB3-207ENST00000565550 VCYO14598 125 aa12.31□□□□□ -0.44
SPSB3-207ENST00000565550 FGF6P10767 208 aa12.31□□□□□ -0.44
SPSB3-207ENST00000565550 RNASEKQ6P5S7 137 aaKnown RBP12.31□□□□□ -0.44
SPSB3-207ENST00000565550 CIRBP-AS1Q8TBR5 109 aa12.31□□□□□ -0.44
SPSB3-207ENST00000565550 C1orf43Q9BWL3 253 aa12.31□□□□□ -0.44
SPSB3-207ENST00000565550 TRBV24-1A0A075B6N3 115 aa12.3□□□□□ -0.44
SPSB3-207ENST00000565550 IGKV3OR2-268A0A0C4DH90 116 aa12.3□□□□□ -0.44
SPSB3-207ENST00000565550 AMMECR1LQ6DCA0 310 aa12.3□□□□□ -0.44
SPSB3-207ENST00000565550 KRTAP26-1Q6PEX3 210 aa12.3□□□□□ -0.44
SPSB3-207ENST00000565550 TMEM136Q6ZRR5 245 aa12.3□□□□□ -0.44
SPSB3-207ENST00000565550 PPP1R17O96001 155 aa12.29□□□□□ -0.44
SPSB3-207ENST00000565550 HLA-DQA1P01909 254 aa12.29□□□□□ -0.44
SPSB3-207ENST00000565550 MIAQ16674 131 aa12.29□□□□□ -0.44
SPSB3-207ENST00000565550 CBLN2Q8IUK8 224 aa12.29□□□□□ -0.44
SPSB3-207ENST00000565550 ORMDL3Q8N138 153 aa12.29□□□□□ -0.44
SPSB3-207ENST00000565550 PRELID3AQ96N28 172 aa12.29□□□□□ -0.44
SPSB3-207ENST00000565550 SMIM2Q9BVW6 85 aa12.29□□□□□ -0.44
SPSB3-207ENST00000565550 FCER1GP30273 86 aa12.28□□□□□ -0.44
SPSB3-207ENST00000565550 C14orf177Q52M58 125 aa12.28□□□□□ -0.44
SPSB3-207ENST00000565550 C20orf78Q9BR46 151 aa12.28□□□□□ -0.44
SPSB3-207ENST00000565550 TCAPO15273 167 aa12.27□□□□□ -0.45
SPSB3-207ENST00000565550 SCO1O75880 301 aa12.27□□□□□ -0.45
SPSB3-207ENST00000565550 KRTAP10-4P60372 401 aaPredicted RBP12.27□□□□□ -0.45
SPSB3-207ENST00000565550 KIAA1644Q3SXP7 199 aa12.27□□□□□ -0.45
SPSB3-207ENST00000565550 LOC389332A0A1B0GUA5 103 aa12.26□□□□□ -0.45
SPSB3-207ENST00000565550 H7C423 109 aa12.26□□□□□ -0.45
SPSB3-207ENST00000565550 PPBPP02775 128 aa12.26□□□□□ -0.45
SPSB3-207ENST00000565550 YPEL4Q96NS1 127 aa12.26□□□□□ -0.45
SPSB3-207ENST00000565550 KIR2DL4Q99706 377 aa12.26□□□□□ -0.45
SPSB3-207ENST00000565550 RPL32P62910 135 aaKnown RBP12.25□□□□□ -0.45
SPSB3-207ENST00000565550 USP17L23D6RBM5 183 aa12.24□□□□□ -0.45
SPSB3-207ENST00000565550 RPL39P62891 51 aaKnown RBP12.24□□□□□ -0.45
SPSB3-207ENST00000565550 RNASE13Q5GAN3 156 aaKnown RBP12.24□□□□□ -0.45
SPSB3-207ENST00000565550 TGIF2-C20orf24A0A0A6YYL0 155 aa12.23□□□□□ -0.45
SPSB3-207ENST00000565550 PHOX2AO14813 284 aa12.23□□□□□ -0.45
SPSB3-207ENST00000565550 UBE2D4Q9Y2X8 147 aa12.23□□□□□ -0.45
SPSB3-207ENST00000565550 LRP1Q07954 4544 aaKnown RBP12.22□□□□□ -0.45
SPSB3-207ENST00000565550 ZNF25P17030 456 aaPredicted RBP12.22□□□□□ -0.45
SPSB3-207ENST00000565550 MRPL52Q86TS9 123 aaKnown RBP12.22□□□□□ -0.45
SPSB3-207ENST00000565550 PRSS1P07477 247 aa12.21□□□□□ -0.45
SPSB3-207ENST00000565550 OR5A1Q8NGJ0 315 aa12.21□□□□□ -0.45
SPSB3-207ENST00000565550 TMEM101Q96IK0 257 aa12.21□□□□□ -0.45
SPSB3-207ENST00000565550 CDC42SE2Q9NRR3 84 aa12.21□□□□□ -0.45
SPSB3-207ENST00000565550 COX19Q49B96 90 aa12.2□□□□□ -0.46
SPSB3-207ENST00000565550 Q6ZUT4 128 aa12.2□□□□□ -0.46
SPSB3-207ENST00000565550 MAP1LC3AQ9H492 121 aa12.2□□□□□ -0.46
SPSB3-207ENST00000565550 TRAV8-4A0A0B4J246 113 aa12.19□□□□□ -0.46
SPSB3-207ENST00000565550 GAGE12HA6NDE8 117 aa12.19□□□□□ -0.46
SPSB3-207ENST00000565550 PRSS47A8MTI9 375 aa12.19□□□□□ -0.46
SPSB3-207ENST00000565550 DGAT2L7PQ6IED9 249 aa12.19□□□□□ -0.46
SPSB3-207ENST00000565550 ZNF664Q8N3J9 261 aa12.19□□□□□ -0.46
SPSB3-207ENST00000565550 CHCHD10Q8WYQ3 142 aaPredicted RBP12.19□□□□□ -0.46
SPSB3-207ENST00000565550 FAM104AQ969W3 186 aa12.19□□□□□ -0.46
SPSB3-207ENST00000565550 OPRPNQ99935 248 aaPredicted RBP12.19□□□□□ -0.46
SPSB3-207ENST00000565550 COLCA2A8K830 154 aa12.18□□□□□ -0.46
SPSB3-207ENST00000565550 OXTP01178 125 aa12.18□□□□□ -0.46
SPSB3-207ENST00000565550 GNB1LQ9BYB4 327 aa12.18□□□□□ -0.46
SPSB3-207ENST00000565550 LAMTOR2Q9Y2Q5 125 aa12.18□□□□□ -0.46
SPSB3-207ENST00000565550 LINC00959A0A1B0GUT2 108 aa12.17□□□□□ -0.46
SPSB3-207ENST00000565550 Q8N8P6 123 aa12.17□□□□□ -0.46
SPSB3-207ENST00000565550 C9orf163Q8N9P6 203 aa12.17□□□□□ -0.46
SPSB3-207ENST00000565550 MRPL18Q9H0U6 180 aaKnown RBP12.17□□□□□ -0.46
SPSB3-207ENST00000565550 FAT3Q8TDW7 4589 aa12.16□□□□□ -0.46
SPSB3-207ENST00000565550 IFI27P40305 119 aaPredicted RBP12.16□□□□□ -0.46
SPSB3-207ENST00000565550 RPL37AP61513 92 aaKnown RBP12.16□□□□□ -0.46
SPSB3-207ENST00000565550 CCL25O15444 150 aa12.15□□□□□ -0.46
SPSB3-207ENST00000565550 MT-ND6P03923 174 aa12.15□□□□□ -0.46
SPSB3-207ENST00000565550 RAB5AP20339 215 aa12.15□□□□□ -0.46
SPSB3-207ENST00000565550 XCL1P47992 114 aa12.15□□□□□ -0.46
SPSB3-207ENST00000565550 SERTAD4-AS1Q5TG53 156 aa12.15□□□□□ -0.46
SPSB3-207ENST00000565550 FOXI1Q12951 378 aa12.14□□□□□ -0.47
SPSB3-207ENST00000565550 TMEM18Q96B42 140 aa12.14□□□□□ -0.47
SPSB3-207ENST00000565550 ALKBH7Q9BT30 221 aaPredicted RBP12.14□□□□□ -0.47
SPSB3-207ENST00000565550 CSDC2Q9Y534 153 aaKnown RBP12.14□□□□□ -0.47
SPSB3-207ENST00000565550 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.14□□□□□ -0.47
SPSB3-207ENST00000565550 FABP9Q0Z7S8 132 aa12.13□□□□□ -0.47
SPSB3-207ENST00000565550 C15orf56Q8N910 161 aa12.13□□□□□ -0.47
SPSB3-207ENST00000565550 TIMM21Q9BVV7 248 aa12.13□□□□□ -0.47
SPSB3-207ENST00000565550 HMCN2Q8NDA2 5059 aa12.13□□□□□ -0.47
SPSB3-207ENST00000565550 PANO1I0J062 215 aa12.12□□□□□ -0.47
SPSB3-207ENST00000565550 SDIM1Q6ZPB5 146 aa12.12□□□□□ -0.47
SPSB3-207ENST00000565550 TRAV13-1A0A0B4J241 112 aa12.11□□□□□ -0.47
SPSB3-207ENST00000565550 HNRNPA3P51991 378 aaKnown RBP12.11□□□□□ -0.47
SPSB3-207ENST00000565550 TRAPPC1Q9Y5R8 145 aa12.11□□□□□ -0.47
SPSB3-207ENST00000565550 hDV102S1A0JD36 115 aa12.1□□□□□ -0.47
SPSB3-207ENST00000565550 SS18Q15532 418 aa12.1□□□□□ -0.47
SPSB3-207ENST00000565550 HIGD2BQ4VC39 106 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 236.4 ms