RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 LAMTOR2Q9Y2Q5 125 aa5.75□□□□□ -1.49
VPS9D1-205ENST00000565452 NCR2O95944 276 aa5.74□□□□□ -1.49
VPS9D1-205ENST00000565452 HLA-DQA1P01909 254 aa5.74□□□□□ -1.49
VPS9D1-205ENST00000565452 MT-ND6P03923 174 aa5.74□□□□□ -1.49
VPS9D1-205ENST00000565452 POLR2KP53803 58 aaKnown RBP5.74□□□□□ -1.49
VPS9D1-205ENST00000565452 RPL32P62910 135 aaKnown RBP5.74□□□□□ -1.49
VPS9D1-205ENST00000565452 ORMDL3Q8N138 153 aa5.74□□□□□ -1.49
VPS9D1-205ENST00000565452 C7orf33Q8WU49 177 aa5.74□□□□□ -1.49
VPS9D1-205ENST00000565452 C20orf78Q9BR46 151 aa5.74□□□□□ -1.49
VPS9D1-205ENST00000565452 CHCHD7Q9BUK0 85 aa5.74□□□□□ -1.49
VPS9D1-205ENST00000565452 SMCO4Q9NRQ5 59 aa5.74□□□□□ -1.49
VPS9D1-205ENST00000565452 KLK12Q9UKR0 248 aa5.74□□□□□ -1.49
VPS9D1-205ENST00000565452 TRBV6-8A0A0A6YYG3 113 aa5.73□□□□□ -1.49
VPS9D1-205ENST00000565452 SDHAF1A6NFY7 115 aa5.73□□□□□ -1.49
VPS9D1-205ENST00000565452 PRSS47A8MTI9 375 aa5.73□□□□□ -1.49
VPS9D1-205ENST00000565452 PANO1I0J062 215 aa5.73□□□□□ -1.49
VPS9D1-205ENST00000565452 I3L3M4 83 aa5.73□□□□□ -1.49
VPS9D1-205ENST00000565452 VCYO14598 125 aa5.73□□□□□ -1.49
VPS9D1-205ENST00000565452 PMCHP20382 165 aa5.73□□□□□ -1.49
VPS9D1-205ENST00000565452 Q0VG73 95 aa5.73□□□□□ -1.49
VPS9D1-205ENST00000565452 COTL1Q14019 142 aa5.73□□□□□ -1.49
VPS9D1-205ENST00000565452 TMEM136Q6ZRR5 245 aa5.73□□□□□ -1.49
VPS9D1-205ENST00000565452 UBE2WQ96B02 151 aa5.73□□□□□ -1.49
VPS9D1-205ENST00000565452 TRBV25-1A0A075B6N4 114 aa5.72□□□□□ -1.49
VPS9D1-205ENST00000565452 TRAV26-2A0A0B4J265 109 aa5.72□□□□□ -1.49
VPS9D1-205ENST00000565452 TRBV27A0A0K0K1C4 114 aa5.72□□□□□ -1.49
VPS9D1-205ENST00000565452 H7C423 109 aa5.72□□□□□ -1.49
VPS9D1-205ENST00000565452 S100A1P23297 94 aa5.72□□□□□ -1.49
VPS9D1-205ENST00000565452 SUMO2P61956 95 aaKnown RBP5.72□□□□□ -1.49
VPS9D1-205ENST00000565452 IQCJQ1A5X6 159 aa5.72□□□□□ -1.49
VPS9D1-205ENST00000565452 ATRAIDQ6UW56 229 aa5.72□□□□□ -1.49
VPS9D1-205ENST00000565452 SPINK6Q6UWN8 80 aa5.72□□□□□ -1.49
VPS9D1-205ENST00000565452 NIT1Q86X76 327 aa5.72□□□□□ -1.49
VPS9D1-205ENST00000565452 C1orf43Q9BWL3 253 aa5.72□□□□□ -1.49
VPS9D1-205ENST00000565452 A0A087WX48 190 aa5.71□□□□□ -1.5
VPS9D1-205ENST00000565452 A0A087WYN8 130 aa5.71□□□□□ -1.5
VPS9D1-205ENST00000565452 IGHV1-24A0A0C4DH33 117 aa5.71□□□□□ -1.5
VPS9D1-205ENST00000565452 D6R8Y8 96 aa5.71□□□□□ -1.5
VPS9D1-205ENST00000565452 TNFRSF6BO95407 300 aa5.71□□□□□ -1.5
VPS9D1-205ENST00000565452 APCSP02743 223 aa5.71□□□□□ -1.5
VPS9D1-205ENST00000565452 PRSS1P07477 247 aa5.71□□□□□ -1.5
VPS9D1-205ENST00000565452 SMAGPQ0VAQ4 97 aa5.71□□□□□ -1.5
VPS9D1-205ENST00000565452 CIRBPQ14011 172 aaKnown RBP5.71□□□□□ -1.5
VPS9D1-205ENST00000565452 NRACQ8N912 160 aa5.71□□□□□ -1.5
VPS9D1-205ENST00000565452 RPL39LQ96EH5 51 aaKnown RBP5.71□□□□□ -1.5
VPS9D1-205ENST00000565452 PRELID3AQ96N28 172 aa5.71□□□□□ -1.5
VPS9D1-205ENST00000565452 KIR2DL4Q99706 377 aa5.71□□□□□ -1.5
VPS9D1-205ENST00000565452 A0A1B0GUV1 79 aa5.7□□□□□ -1.5
VPS9D1-205ENST00000565452 USP17L23D6RBM5 183 aa5.7□□□□□ -1.5
VPS9D1-205ENST00000565452 K7EMI3 77 aa5.7□□□□□ -1.5
VPS9D1-205ENST00000565452 G0S2P27469 103 aa5.7□□□□□ -1.5
VPS9D1-205ENST00000565452 NTM-AS1Q6ZSK4 140 aa5.7□□□□□ -1.5
VPS9D1-205ENST00000565452 CRCT1Q9UGL9 99 aa5.7□□□□□ -1.5
VPS9D1-205ENST00000565452 TMEM262E9PQX1 116 aa5.69□□□□□ -1.5
VPS9D1-205ENST00000565452 UBE2L6O14933 153 aa5.69□□□□□ -1.5
VPS9D1-205ENST00000565452 RPS10P46783 165 aaKnown RBP5.69□□□□□ -1.5
VPS9D1-205ENST00000565452 AMTP48728 403 aa5.69□□□□□ -1.5
VPS9D1-205ENST00000565452 TMEM18Q96B42 140 aa5.69□□□□□ -1.5
VPS9D1-205ENST00000565452 YPEL4Q96NS1 127 aa5.69□□□□□ -1.5
VPS9D1-205ENST00000565452 CHCHD5Q9BSY4 110 aa5.69□□□□□ -1.5
VPS9D1-205ENST00000565452 TMEM243Q9BU79 118 aa5.69□□□□□ -1.5
VPS9D1-205ENST00000565452 MAP1LC3AQ9H492 121 aa5.69□□□□□ -1.5
VPS9D1-205ENST00000565452 TRAPPC1Q9Y5R8 145 aa5.69□□□□□ -1.5
VPS9D1-205ENST00000565452 TGIF2-C20orf24A0A0A6YYL0 155 aa5.68□□□□□ -1.5
VPS9D1-205ENST00000565452 LINC01549A6NIU2 74 aa5.68□□□□□ -1.5
VPS9D1-205ENST00000565452 SMKR1H3BMG3 65 aa5.68□□□□□ -1.5
VPS9D1-205ENST00000565452 RAB5AP20339 215 aa5.68□□□□□ -1.5
VPS9D1-205ENST00000565452 FCER1GP30273 86 aa5.68□□□□□ -1.5
VPS9D1-205ENST00000565452 FABP9Q0Z7S8 132 aa5.68□□□□□ -1.5
VPS9D1-205ENST00000565452 SMIM2Q9BVW6 85 aa5.68□□□□□ -1.5
VPS9D1-205ENST00000565452 MRPL18Q9H0U6 180 aaKnown RBP5.68□□□□□ -1.5
VPS9D1-205ENST00000565452 NXT2Q9NPJ8 142 aaKnown RBP5.68□□□□□ -1.5
VPS9D1-205ENST00000565452 PLAC8Q9NZF1 115 aa5.68□□□□□ -1.5
VPS9D1-205ENST00000565452 IGHV3-64A0A075B6Q5 118 aa5.67□□□□□ -1.5
VPS9D1-205ENST00000565452 NPYP01303 97 aa5.67□□□□□ -1.5
VPS9D1-205ENST00000565452 ESDP10768 282 aa5.67□□□□□ -1.5
VPS9D1-205ENST00000565452 ZNF25P17030 456 aaPredicted RBP5.67□□□□□ -1.5
VPS9D1-205ENST00000565452 PRR3P79522 188 aaKnown RBP5.67□□□□□ -1.5
VPS9D1-205ENST00000565452 Q8N8P6 123 aa5.67□□□□□ -1.5
VPS9D1-205ENST00000565452 ALKBH7Q9BT30 221 aaPredicted RBP5.67□□□□□ -1.5
VPS9D1-205ENST00000565452 TSHBP01222 138 aa5.66□□□□□ -1.5
VPS9D1-205ENST00000565452 CRPP02741 224 aa5.66□□□□□ -1.5
VPS9D1-205ENST00000565452 ORMDL2Q53FV1 153 aa5.66□□□□□ -1.5
VPS9D1-205ENST00000565452 TIMM21Q9BVV7 248 aa5.66□□□□□ -1.5
VPS9D1-205ENST00000565452 CSDC2Q9Y534 153 aaKnown RBP5.66□□□□□ -1.5
VPS9D1-205ENST00000565452 FSIP2Q5CZC0 6907 aa5.66□□□□□ -1.5
VPS9D1-205ENST00000565452 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.65□□□□□ -1.5
VPS9D1-205ENST00000565452 COLCA2A8K830 154 aa5.65□□□□□ -1.5
VPS9D1-205ENST00000565452 RAB5BP61020 215 aa5.65□□□□□ -1.5
VPS9D1-205ENST00000565452 GAGE6Q13070 117 aa5.65□□□□□ -1.5
VPS9D1-205ENST00000565452 SRSF9Q13242 221 aaKnown RBP eCLIP5.65□□□□□ -1.5
VPS9D1-205ENST00000565452 KIAA1644Q3SXP7 199 aa5.65□□□□□ -1.5
VPS9D1-205ENST00000565452 AMMECR1LQ6DCA0 310 aa5.65□□□□□ -1.5
VPS9D1-205ENST00000565452 ENHOQ6UWT2 76 aa5.65□□□□□ -1.5
VPS9D1-205ENST00000565452 MRPL52Q86TS9 123 aaKnown RBP5.65□□□□□ -1.5
VPS9D1-205ENST00000565452 CBLN2Q8IUK8 224 aa5.65□□□□□ -1.5
VPS9D1-205ENST00000565452 C20orf203Q8NBC4 194 aa5.65□□□□□ -1.5
VPS9D1-205ENST00000565452 PRSS3P2Q8NHM4 247 aa5.65□□□□□ -1.5
VPS9D1-205ENST00000565452 SPACA4Q8TDM5 124 aa5.65□□□□□ -1.5
VPS9D1-205ENST00000565452 TMEM101Q96IK0 257 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 344.9 ms