RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.56□□□□□ -1.68
PTPN9-204ENST00000564970 CACNA1DQ01668 2161 aa4.55□□□□□ -1.68
PTPN9-204ENST00000564970 IGLV4-3A0A075B6K6 122 aa4.55□□□□□ -1.68
PTPN9-204ENST00000564970 C10orf142B7Z368 130 aa4.55□□□□□ -1.68
PTPN9-204ENST00000564970 NREPQ16612 68 aa4.55□□□□□ -1.68
PTPN9-204ENST00000564970 DEFB114Q30KQ6 69 aa4.55□□□□□ -1.68
PTPN9-204ENST00000564970 RUSC1-AS1Q66K80 236 aa4.55□□□□□ -1.68
PTPN9-204ENST00000564970 UNQ9165/PRO28630Q6UXU0 137 aa4.55□□□□□ -1.68
PTPN9-204ENST00000564970 Q6ZTC4 211 aa4.55□□□□□ -1.68
PTPN9-204ENST00000564970 C11orf45Q8TAV5 145 aa4.55□□□□□ -1.68
PTPN9-204ENST00000564970 PATE1Q8WXA2 126 aa4.55□□□□□ -1.68
PTPN9-204ENST00000564970 RTTNQ86VV8 2226 aa4.55□□□□□ -1.68
PTPN9-204ENST00000564970 SPTAN1Q13813 2472 aaKnown RBP4.55□□□□□ -1.68
PTPN9-204ENST00000564970 DSCAMO60469 2012 aa4.55□□□□□ -1.68
PTPN9-204ENST00000564970 K7EMT4 169 aa4.54□□□□□ -1.68
PTPN9-204ENST00000564970 NDUFB1O75438 58 aa4.54□□□□□ -1.68
PTPN9-204ENST00000564970 CTSGP08311 255 aa4.54□□□□□ -1.68
PTPN9-204ENST00000564970 MGPP08493 103 aa4.54□□□□□ -1.68
PTPN9-204ENST00000564970 ELOF1P60002 83 aaKnown RBP4.54□□□□□ -1.68
PTPN9-204ENST00000564970 C19orf54Q5BKX5 351 aa4.54□□□□□ -1.68
PTPN9-204ENST00000564970 C1orf229Q6ZS94 237 aaPredicted RBP4.54□□□□□ -1.68
PTPN9-204ENST00000564970 FAM19A3Q7Z5A8 133 aa4.54□□□□□ -1.68
PTPN9-204ENST00000564970 NKAPP1Q8N9T2 125 aa4.54□□□□□ -1.68
PTPN9-204ENST00000564970 Q8TAT8 98 aa4.54□□□□□ -1.68
PTPN9-204ENST00000564970 RPL39LQ96EH5 51 aaKnown RBP4.54□□□□□ -1.68
PTPN9-204ENST00000564970 BPESC1Q9GZL8 116 aa4.54□□□□□ -1.68
PTPN9-204ENST00000564970 SNURFQ9Y675 71 aa4.54□□□□□ -1.68
PTPN9-204ENST00000564970 FREM2Q5SZK8 3169 aa4.54□□□□□ -1.68
PTPN9-204ENST00000564970 A0A087WZ39 114 aa4.53□□□□□ -1.68
PTPN9-204ENST00000564970 A0A096LPE4 126 aa4.53□□□□□ -1.68
PTPN9-204ENST00000564970 IGLV5-39A0A0G2JS06 123 aa4.53□□□□□ -1.68
PTPN9-204ENST00000564970 A0A0J9YXV3 536 aa4.53□□□□□ -1.68
PTPN9-204ENST00000564970 A0A1W2PPZ6 126 aa4.53□□□□□ -1.68
PTPN9-204ENST00000564970 ADARB2-AS1A8MUL3 147 aa4.53□□□□□ -1.68
PTPN9-204ENST00000564970 BUB1B-PAK6H3BSN5 160 aa4.53□□□□□ -1.68
PTPN9-204ENST00000564970 K7EIM0 57 aa4.53□□□□□ -1.68
PTPN9-204ENST00000564970 HCP5Q6MZN7 132 aa4.53□□□□□ -1.68
PTPN9-204ENST00000564970 SOSTDC1Q6X4U4 206 aa4.53□□□□□ -1.68
PTPN9-204ENST00000564970 LINC00269Q8N2A0 174 aa4.53□□□□□ -1.68
PTPN9-204ENST00000564970 C9orf106Q8NAJ2 232 aa4.53□□□□□ -1.68
PTPN9-204ENST00000564970 ZNF625Q96I27 306 aaPredicted RBP4.53□□□□□ -1.68
PTPN9-204ENST00000564970 KIF25-AS1Q9Y6Z4 181 aa4.53□□□□□ -1.68
PTPN9-204ENST00000564970 NOTCH4Q99466 2003 aa4.53□□□□□ -1.68
PTPN9-204ENST00000564970 TRBV6-8A0A0A6YYG3 113 aa4.52□□□□□ -1.69
PTPN9-204ENST00000564970 LINC01547P58512 204 aaPredicted RBP4.52□□□□□ -1.69
PTPN9-204ENST00000564970 RPL11P62913 178 aaKnown RBP4.52□□□□□ -1.69
PTPN9-204ENST00000564970 SYCNQ0VAF6 134 aa4.52□□□□□ -1.69
PTPN9-204ENST00000564970 KIAA0087Q14695 138 aa4.52□□□□□ -1.69
PTPN9-204ENST00000564970 C9orf66Q5T8R8 295 aa4.52□□□□□ -1.69
PTPN9-204ENST00000564970 Q6ZRP5 223 aa4.52□□□□□ -1.69
PTPN9-204ENST00000564970 MIR7-3HGQ8N6C7 128 aa4.52□□□□□ -1.69
PTPN9-204ENST00000564970 SPATA3Q8NHX4 192 aa4.52□□□□□ -1.69
PTPN9-204ENST00000564970 FAM218AQ96MZ4 157 aa4.52□□□□□ -1.69
PTPN9-204ENST00000564970 POLEQ07864 2286 aa4.51□□□□□ -1.69
PTPN9-204ENST00000564970 TRAV22A0A0B4J277 110 aa4.51□□□□□ -1.69
PTPN9-204ENST00000564970 IGHV1-3A0A0C4DH29 117 aa4.51□□□□□ -1.69
PTPN9-204ENST00000564970 IGHV3-20A0A0C4DH32 117 aa4.51□□□□□ -1.69
PTPN9-204ENST00000564970 A6NN06 94 aa4.51□□□□□ -1.69
PTPN9-204ENST00000564970 CCL3P10147 92 aa4.51□□□□□ -1.69
PTPN9-204ENST00000564970 PLA2G2AP14555 144 aa4.51□□□□□ -1.69
PTPN9-204ENST00000564970 LINC00315P59091 139 aa4.51□□□□□ -1.69
PTPN9-204ENST00000564970 RPL39P62891 51 aaKnown RBP4.51□□□□□ -1.69
PTPN9-204ENST00000564970 KLK9Q2XQG4 91 aa4.51□□□□□ -1.69
PTPN9-204ENST00000564970 FAM229BQ4G0N7 80 aa4.51□□□□□ -1.69
PTPN9-204ENST00000564970 LCE3BQ5TA77 95 aa4.51□□□□□ -1.69
PTPN9-204ENST00000564970 C11orf21Q9P2W6 132 aa4.51□□□□□ -1.69
PTPN9-204ENST00000564970 KLK9Q9UKQ9 250 aa4.51□□□□□ -1.69
PTPN9-204ENST00000564970 TNCP24821 2201 aa4.51□□□□□ -1.69
PTPN9-204ENST00000564970 C2CD3Q4AC94 2353 aa4.5□□□□□ -1.69
PTPN9-204ENST00000564970 LCE6AA0A183 80 aa4.5□□□□□ -1.69
PTPN9-204ENST00000564970 ZNF503-AS2A6NEH8 195 aa4.5□□□□□ -1.69
PTPN9-204ENST00000564970 A8MUN3 132 aa4.5□□□□□ -1.69
PTPN9-204ENST00000564970 BPY2O14599 106 aa4.5□□□□□ -1.69
PTPN9-204ENST00000564970 LY6HO94772 140 aa4.5□□□□□ -1.69
PTPN9-204ENST00000564970 IGHV3-48P01763 117 aa4.5□□□□□ -1.69
PTPN9-204ENST00000564970 MRGPRG-AS1Q2M3A8 158 aa4.5□□□□□ -1.69
PTPN9-204ENST00000564970 C10orf55Q5SWW7 151 aa4.5□□□□□ -1.69
PTPN9-204ENST00000564970 IGFL4Q6B9Z1 124 aa4.5□□□□□ -1.69
PTPN9-204ENST00000564970 SUMO4Q6EEV6 95 aa4.5□□□□□ -1.69
PTPN9-204ENST00000564970 Q8N3U1 123 aa4.5□□□□□ -1.69
PTPN9-204ENST00000564970 NF1P21359 2839 aa4.49□□□□□ -1.69
PTPN9-204ENST00000564970 COL12A1Q99715 3063 aa4.49□□□□□ -1.69
PTPN9-204ENST00000564970 A0A1B0GW54 56 aa4.49□□□□□ -1.69
PTPN9-204ENST00000564970 H0Y8X5 98 aa4.49□□□□□ -1.69
PTPN9-204ENST00000564970 LY6G6DO95868 133 aa4.49□□□□□ -1.69
PTPN9-204ENST00000564970 IGKV3-15P01624 115 aa4.49□□□□□ -1.69
PTPN9-204ENST00000564970 MRPS21P82921 87 aaKnown RBP4.49□□□□□ -1.69
PTPN9-204ENST00000564970 PRR26Q8N8Z3 221 aa4.49□□□□□ -1.69
PTPN9-204ENST00000564970 Q9HAA7 133 aa4.49□□□□□ -1.69
PTPN9-204ENST00000564970 NBPF19A0A087WUL8 3843 aa4.48□□□□□ -1.69
PTPN9-204ENST00000564970 KRTAP4-8A0A0G2JLE6 195 aa4.48□□□□□ -1.69
PTPN9-204ENST00000564970 C19orf84I3L1E1 186 aa4.48□□□□□ -1.69
PTPN9-204ENST00000564970 M0QY20 66 aa4.48□□□□□ -1.69
PTPN9-204ENST00000564970 LECT2O14960 151 aa4.48□□□□□ -1.69
PTPN9-204ENST00000564970 SPRY3O43610 288 aa4.48□□□□□ -1.69
PTPN9-204ENST00000564970 FAM74A4Q5TZK3 123 aa4.48□□□□□ -1.69
PTPN9-204ENST00000564970 CLEC19AQ6UXS0 136 aa4.48□□□□□ -1.69
PTPN9-204ENST00000564970 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.48□□□□□ -1.69
PTPN9-204ENST00000564970 Q6ZQT0 140 aa4.48□□□□□ -1.69
PTPN9-204ENST00000564970 Q75L30 129 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms