RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 Q6ZUT4 128 aa13.68□□□□□ -0.22
CLN6-205ENST00000564846 C2orf88Q9BSF0 95 aa13.68□□□□□ -0.22
CLN6-205ENST00000564846 MRPS16Q9Y3D3 137 aaKnown RBP13.68□□□□□ -0.22
CLN6-205ENST00000564846 DLEU1O43261 78 aa13.67□□□□□ -0.22
CLN6-205ENST00000564846 C12orf74Q32Q52 190 aa13.67□□□□□ -0.22
CLN6-205ENST00000564846 BOD1L2Q8IYS8 172 aa13.67□□□□□ -0.22
CLN6-205ENST00000564846 TRAV26-1A0A087WT03 109 aa13.66□□□□□ -0.22
CLN6-205ENST00000564846 SPATA25Q9BR10 227 aa13.66□□□□□ -0.22
CLN6-205ENST00000564846 IGKV2D-26A0A0A0MRZ7 120 aa13.66□□□□□ -0.22
CLN6-205ENST00000564846 A0A0J9YY99 117 aa13.66□□□□□ -0.22
CLN6-205ENST00000564846 CTAG1AP78358 180 aa13.66□□□□□ -0.22
CLN6-205ENST00000564846 DEFB121Q5J5C9 76 aa13.66□□□□□ -0.22
CLN6-205ENST00000564846 AMMECR1LQ6DCA0 310 aa13.66□□□□□ -0.22
CLN6-205ENST00000564846 CHAC1Q9BUX1 264 aa13.66□□□□□ -0.22
CLN6-205ENST00000564846 NOTCH1P46531 2555 aa13.65□□□□□ -0.22
CLN6-205ENST00000564846 HTN3P15516 51 aa13.65□□□□□ -0.22
CLN6-205ENST00000564846 OR5A1Q8NGJ0 315 aa13.65□□□□□ -0.22
CLN6-205ENST00000564846 E9PLD3 99 aa13.64□□□□□ -0.23
CLN6-205ENST00000564846 ZNF25P17030 456 aaPredicted RBP13.64□□□□□ -0.23
CLN6-205ENST00000564846 HERVK_113P61574 105 aa13.64□□□□□ -0.23
CLN6-205ENST00000564846 RNASE13Q5GAN3 156 aaKnown RBP13.64□□□□□ -0.23
CLN6-205ENST00000564846 PCP2Q8IVA1 136 aa13.64□□□□□ -0.23
CLN6-205ENST00000564846 TMEM101Q96IK0 257 aa13.64□□□□□ -0.23
CLN6-205ENST00000564846 TP73-AS1Q9UF72 201 aa13.64□□□□□ -0.23
CLN6-205ENST00000564846 A0A0J9YXV3 536 aa13.63□□□□□ -0.23
CLN6-205ENST00000564846 TMEM170BQ5T4T1 132 aa13.63□□□□□ -0.23
CLN6-205ENST00000564846 TM2D3Q9BRN9 247 aa13.63□□□□□ -0.23
CLN6-205ENST00000564846 A0A0J9YWU9 116 aa13.63□□□□□ -0.23
CLN6-205ENST00000564846 M0R143 59 aa13.63□□□□□ -0.23
CLN6-205ENST00000564846 CHCHD5Q9BSY4 110 aa13.63□□□□□ -0.23
CLN6-205ENST00000564846 CDC42SE2Q9NRR3 84 aa13.63□□□□□ -0.23
CLN6-205ENST00000564846 MRPL23Q16540 153 aaKnown RBP13.62□□□□□ -0.23
CLN6-205ENST00000564846 SH2D6Q7Z4S9 175 aa13.62□□□□□ -0.23
CLN6-205ENST00000564846 NBEAL1Q6ZS30 2694 aa13.61□□□□□ -0.23
CLN6-205ENST00000564846 TINCRA0A1B0GVN0 87 aa13.61□□□□□ -0.23
CLN6-205ENST00000564846 SIVA1O15304 175 aa13.6□□□□□ -0.23
CLN6-205ENST00000564846 UBE2D1P51668 147 aa13.6□□□□□ -0.23
CLN6-205ENST00000564846 GAGE6Q13070 117 aa13.6□□□□□ -0.23
CLN6-205ENST00000564846 LURAP1LQ8IV03 231 aa13.6□□□□□ -0.23
CLN6-205ENST00000564846 ICOSQ9Y6W8 199 aa13.6□□□□□ -0.23
CLN6-205ENST00000564846 MGAM2Q2M2H8 2515 aa13.6□□□□□ -0.23
CLN6-205ENST00000564846 A0A096LPF7 62 aa13.6□□□□□ -0.23
CLN6-205ENST00000564846 ZNF22P17026 224 aaPredicted RBP13.6□□□□□ -0.23
CLN6-205ENST00000564846 C2orf91Q6ZV80 131 aa13.6□□□□□ -0.23
CLN6-205ENST00000564846 TRAV8-6A0A0B4J262 113 aa13.59□□□□□ -0.23
CLN6-205ENST00000564846 H3BNG1 76 aa13.59□□□□□ -0.23
CLN6-205ENST00000564846 MRAPQ8TCY5 172 aa13.59□□□□□ -0.23
CLN6-205ENST00000564846 SNHG12Q9BXW3 62 aa13.59□□□□□ -0.23
CLN6-205ENST00000564846 TMEM223A0PJW6 202 aa13.58□□□□□ -0.23
CLN6-205ENST00000564846 Q6ZTC4 211 aa13.58□□□□□ -0.23
CLN6-205ENST00000564846 C11orf45Q8TAV5 145 aa13.58□□□□□ -0.23
CLN6-205ENST00000564846 LBHQ53QV2 105 aaPredicted RBP13.58□□□□□ -0.24
CLN6-205ENST00000564846 FAM19A3Q7Z5A8 133 aa13.58□□□□□ -0.24
CLN6-205ENST00000564846 TTTY13Q9BZ97 58 aa13.58□□□□□ -0.24
CLN6-205ENST00000564846 TIRAPP58753 221 aa13.57□□□□□ -0.24
CLN6-205ENST00000564846 SEC11AP67812 179 aa13.57□□□□□ -0.24
CLN6-205ENST00000564846 GEMIN7Q9H840 131 aaKnown RBP13.57□□□□□ -0.24
CLN6-205ENST00000564846 EREGO14944 169 aa13.56□□□□□ -0.24
CLN6-205ENST00000564846 MAPKAPK5-AS1Q8N8E1 139 aa13.55□□□□□ -0.24
CLN6-205ENST00000564846 HERVK_113P63121 156 aa13.55□□□□□ -0.24
CLN6-205ENST00000564846 IGLV5-45A0A087WSX0 123 aa13.54□□□□□ -0.24
CLN6-205ENST00000564846 MYMXA0A1B0GTQ4 84 aa13.54□□□□□ -0.24
CLN6-205ENST00000564846 A0A1B0GUV1 79 aa13.54□□□□□ -0.24
CLN6-205ENST00000564846 NANOS2P60321 138 aaKnown RBP13.54□□□□□ -0.24
CLN6-205ENST00000564846 IGLV4-60A0A075B6I1 120 aa13.53□□□□□ -0.24
CLN6-205ENST00000564846 TMEM262E9PQX1 116 aa13.53□□□□□ -0.24
CLN6-205ENST00000564846 LINC00242Q5T6M2 205 aa13.53□□□□□ -0.24
CLN6-205ENST00000564846 LINC00469Q8N7U9 141 aa13.53□□□□□ -0.24
CLN6-205ENST00000564846 HIGD1BQ9P298 99 aa13.53□□□□□ -0.24
CLN6-205ENST00000564846 TRAV13-1A0A0B4J241 112 aa13.53□□□□□ -0.24
CLN6-205ENST00000564846 LEPROTO15243 131 aa13.52□□□□□ -0.25
CLN6-205ENST00000564846 LELP1Q5T871 98 aa13.52□□□□□ -0.25
CLN6-205ENST00000564846 H3BRM9 83 aa13.51□□□□□ -0.25
CLN6-205ENST00000564846 HINT1P49773 126 aaPredicted RBP13.51□□□□□ -0.25
CLN6-205ENST00000564846 BATFQ16520 125 aa13.51□□□□□ -0.25
CLN6-205ENST00000564846 MPV17L2Q567V2 206 aa13.51□□□□□ -0.25
CLN6-205ENST00000564846 PLEKHB2Q96CS7 222 aa13.51□□□□□ -0.25
CLN6-205ENST00000564846 DEFB131BA0A096LNP1 70 aa13.5□□□□□ -0.25
CLN6-205ENST00000564846 ZNF815PA8K554 130 aa13.5□□□□□ -0.25
CLN6-205ENST00000564846 J3QQQ9 107 aa13.5□□□□□ -0.25
CLN6-205ENST00000564846 RBX1P62877 108 aa13.5□□□□□ -0.25
CLN6-205ENST00000564846 LGALS3P17931 250 aaKnown RBP13.5□□□□□ -0.25
CLN6-205ENST00000564846 TENM3Q9P273 2699 aa13.49□□□□□ -0.25
CLN6-205ENST00000564846 IGHV1-58A0A0C4DH39 117 aa13.49□□□□□ -0.25
CLN6-205ENST00000564846 COX6A2Q02221 97 aa13.49□□□□□ -0.25
CLN6-205ENST00000564846 HSD52Q0P140 79 aa13.49□□□□□ -0.25
CLN6-205ENST00000564846 CDKN2A-AS1Q9UH64 79 aa13.49□□□□□ -0.25
CLN6-205ENST00000564846 TSPEAR-AS2P59090 65 aa13.48□□□□□ -0.25
CLN6-205ENST00000564846 IGHV3-64A0A075B6Q5 118 aa13.48□□□□□ -0.25
CLN6-205ENST00000564846 BVES-AS1Q5T3Y7 98 aa13.48□□□□□ -0.25
CLN6-205ENST00000564846 LYPD5Q6UWN5 251 aa13.48□□□□□ -0.25
CLN6-205ENST00000564846 IGHV3-30-3P0DP02 117 aa13.47□□□□□ -0.25
CLN6-205ENST00000564846 SPINK8P0C7L1 97 aa13.46□□□□□ -0.25
CLN6-205ENST00000564846 TRAV8-3A0A0A6YYJ7 113 aa13.45□□□□□ -0.26
CLN6-205ENST00000564846 TRAV10A0A0B4J240 114 aa13.45□□□□□ -0.26
CLN6-205ENST00000564846 B9D2Q9BPU9 175 aa13.45□□□□□ -0.26
CLN6-205ENST00000564846 COL5A1-AS1Q5SY13 56 aa13.45□□□□□ -0.26
CLN6-205ENST00000564846 SCGB1D4Q6XE38 83 aa13.45□□□□□ -0.26
CLN6-205ENST00000564846 IGKV3OR2-268A0A0C4DH90 116 aa13.44□□□□□ -0.26
CLN6-205ENST00000564846 HUWE1Q7Z6Z7 4374 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms