RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 JMJD1CQ15652 2540 aa2.56□□□□□ -2
CHD9-213ENST00000564845 A0A1B0GV90 55 aa2.55□□□□□ -2
CHD9-213ENST00000564845 H3BPC8 53 aa2.55□□□□□ -2
CHD9-213ENST00000564845 CFHR4Q92496 578 aa2.55□□□□□ -2
CHD9-213ENST00000564845 TRGV1A0A0A0MS02 117 aa2.55□□□□□ -2
CHD9-213ENST00000564845 TCTEX1D4Q5JR98 221 aa2.55□□□□□ -2
CHD9-213ENST00000564845 COX8CQ7Z4L0 72 aa2.55□□□□□ -2
CHD9-213ENST00000564845 TP53AIP1Q9HCN2 124 aa2.55□□□□□ -2
CHD9-213ENST00000564845 D6R8Y8 96 aa2.55□□□□□ -2
CHD9-213ENST00000564845 CD300EQ496F6 205 aaPredicted RBP2.55□□□□□ -2
CHD9-213ENST00000564845 C18orf15Q96N68 181 aa2.55□□□□□ -2
CHD9-213ENST00000564845 TTTY13Q9BZ97 58 aa2.55□□□□□ -2
CHD9-213ENST00000564845 RNASE2P10153 161 aaKnown RBP2.55□□□□□ -2
CHD9-213ENST00000564845 FAM30AQ9NZY2 134 aa2.55□□□□□ -2
CHD9-213ENST00000564845 TRAV23DV6A0A075B6W5 121 aa2.55□□□□□ -2
CHD9-213ENST00000564845 CENPVL3A0A0U1RRI6 287 aa2.55□□□□□ -2
CHD9-213ENST00000564845 Q9UF83 564 aa2.55□□□□□ -2
CHD9-213ENST00000564845 ACANP16112 2415 aa2.55□□□□□ -2
CHD9-213ENST00000564845 IGKV1D-37A0A075B6S9 117 aa2.55□□□□□ -2
CHD9-213ENST00000564845 Q6Q795 121 aa2.55□□□□□ -2
CHD9-213ENST00000564845 ZNF843Q8N446 348 aa2.55□□□□□ -2
CHD9-213ENST00000564845 HIVEP2P31629 2446 aa2.55□□□□□ -2
CHD9-213ENST00000564845 NDUFA7O95182 113 aa2.55□□□□□ -2
CHD9-213ENST00000564845 UBE2D1P51668 147 aa2.55□□□□□ -2
CHD9-213ENST00000564845 DEFB125Q8N687 156 aa2.55□□□□□ -2
CHD9-213ENST00000564845 UQCRQO14949 82 aa2.54□□□□□ -2
CHD9-213ENST00000564845 PRB2P02812 416 aaPredicted RBP2.54□□□□□ -2
CHD9-213ENST00000564845 RBM3P98179 157 aaKnown RBP2.54□□□□□ -2
CHD9-213ENST00000564845 TP53TG3Q9ULZ0 132 aa2.54□□□□□ -2
CHD9-213ENST00000564845 MEGF8Q7Z7M0 2845 aa2.54□□□□□ -2
CHD9-213ENST00000564845 DNAH7Q8WXX0 4024 aa2.54□□□□□ -2
CHD9-213ENST00000564845 TNFRSF13BO14836 293 aaPredicted RBP2.54□□□□□ -2
CHD9-213ENST00000564845 UBE2V1Q13404 147 aa2.54□□□□□ -2
CHD9-213ENST00000564845 RNASE13Q5GAN3 156 aaKnown RBP2.54□□□□□ -2
CHD9-213ENST00000564845 ESM1Q9NQ30 184 aa2.54□□□□□ -2
CHD9-213ENST00000564845 CLPSL1A2RUU4 121 aa2.54□□□□□ -2
CHD9-213ENST00000564845 TEX22C9J3V5 150 aa2.54□□□□□ -2
CHD9-213ENST00000564845 CTAG1AP78358 180 aa2.54□□□□□ -2
CHD9-213ENST00000564845 C14orf144Q96I85 54 aa2.54□□□□□ -2
CHD9-213ENST00000564845 CSTL1Q9H114 145 aa2.54□□□□□ -2
CHD9-213ENST00000564845 ZNF80P51504 273 aaPredicted RBP2.54□□□□□ -2
CHD9-213ENST00000564845 Q8N976 141 aa2.54□□□□□ -2
CHD9-213ENST00000564845 ODF3BA8MYP8 253 aa2.54□□□□□ -2
CHD9-213ENST00000564845 K7EIM0 57 aa2.54□□□□□ -2
CHD9-213ENST00000564845 SH2D1AO60880 128 aa2.54□□□□□ -2
CHD9-213ENST00000564845 APRG1Q8IVJ8 170 aa2.54□□□□□ -2
CHD9-213ENST00000564845 IGLV11-55A0A075B6I3 123 aa2.54□□□□□ -2
CHD9-213ENST00000564845 A0A1B0GUV1 79 aa2.54□□□□□ -2
CHD9-213ENST00000564845 SERF1AO75920 110 aa2.54□□□□□ -2
CHD9-213ENST00000564845 LINC00310P59036 64 aa2.54□□□□□ -2
CHD9-213ENST00000564845 ARMS2P0C7Q2 107 aa2.53□□□□□ -2
CHD9-213ENST00000564845 KNCNA6PVL3 124 aa2.53□□□□□ -2
CHD9-213ENST00000564845 J3QQQ9 107 aa2.53□□□□□ -2
CHD9-213ENST00000564845 RNASE1P07998 156 aaKnown RBP2.53□□□□□ -2
CHD9-213ENST00000564845 XCL1P47992 114 aa2.53□□□□□ -2
CHD9-213ENST00000564845 EBI3Q14213 229 aa2.53□□□□□ -2
CHD9-213ENST00000564845 DEFB112Q30KQ8 113 aa2.53□□□□□ -2
CHD9-213ENST00000564845 TIRAPP58753 221 aa2.53□□□□□ -2
CHD9-213ENST00000564845 C20orf197Q8N268 126 aa2.53□□□□□ -2
CHD9-213ENST00000564845 DEFB4AO15263 64 aa2.53□□□□□ -2
CHD9-213ENST00000564845 TOMM6Q96B49 74 aa2.53□□□□□ -2
CHD9-213ENST00000564845 BAHCC1Q9P281 2608 aa2.53□□□□□ -2
CHD9-213ENST00000564845 IGHV3-64A0A075B6Q5 118 aa2.53□□□□□ -2
CHD9-213ENST00000564845 IGLC7A0M8Q6 106 aa2.53□□□□□ -2
CHD9-213ENST00000564845 RNASE4P34096 147 aaKnown RBP2.53□□□□□ -2
CHD9-213ENST00000564845 CFHR3Q02985 330 aa2.53□□□□□ -2
CHD9-213ENST00000564845 UFSP1Q6NVU6 142 aa2.53□□□□□ -2
CHD9-213ENST00000564845 UPK3BQ9BT76 320 aa2.53□□□□□ -2
CHD9-213ENST00000564845 IGKV3D-20A0A0C4DH25 116 aa2.53□□□□□ -2
CHD9-213ENST00000564845 DEFB114Q30KQ6 69 aa2.53□□□□□ -2
CHD9-213ENST00000564845 RNASE8Q8TDE3 154 aaKnown RBP2.53□□□□□ -2
CHD9-213ENST00000564845 IGHV4-4A0A075B6R2 117 aa2.53□□□□□ -2
CHD9-213ENST00000564845 E9PLD3 99 aa2.53□□□□□ -2
CHD9-213ENST00000564845 CRIP2P52943 208 aaPredicted RBP2.53□□□□□ -2
CHD9-213ENST00000564845 PROK1P58294 105 aa2.53□□□□□ -2
CHD9-213ENST00000564845 LINC00643Q86TS7 51 aa2.53□□□□□ -2
CHD9-213ENST00000564845 KLK9Q9UKQ9 250 aa2.53□□□□□ -2
CHD9-213ENST00000564845 C9orf118A6NHY6 69 aa2.53□□□□□ -2.01
CHD9-213ENST00000564845 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.53□□□□□ -2.01
CHD9-213ENST00000564845 DIRC1Q969H9 104 aa2.53□□□□□ -2.01
CHD9-213ENST00000564845 VPREB1P12018 145 aa2.52□□□□□ -2.01
CHD9-213ENST00000564845 ETDBQ3ZM63 59 aa2.52□□□□□ -2.01
CHD9-213ENST00000564845 WNK1Q9H4A3 2382 aa2.52□□□□□ -2.01
CHD9-213ENST00000564845 IGLV1-47P01700 117 aa2.52□□□□□ -2.01
CHD9-213ENST00000564845 A0A096LPF7 62 aa2.52□□□□□ -2.01
CHD9-213ENST00000564845 TRBV10-2A0A0K0K1G8 114 aa2.52□□□□□ -2.01
CHD9-213ENST00000564845 DAND5Q8N907 189 aa2.52□□□□□ -2.01
CHD9-213ENST00000564845 CHKB-CPT1BH3BT56 60 aa2.52□□□□□ -2.01
CHD9-213ENST00000564845 GNRH2O43555 120 aa2.52□□□□□ -2.01
CHD9-213ENST00000564845 IGHV4OR15-8A0A075B7B6 117 aa2.52□□□□□ -2.01
CHD9-213ENST00000564845 A0A087WW49 117 aa2.52□□□□□ -2.01
CHD9-213ENST00000564845 CRIP1P50238 77 aa2.52□□□□□ -2.01
CHD9-213ENST00000564845 LINC00158P58513 81 aa2.52□□□□□ -2.01
CHD9-213ENST00000564845 MRAPQ8TCY5 172 aa2.52□□□□□ -2.01
CHD9-213ENST00000564845 NTN5Q8WTR8 489 aaPredicted RBP2.52□□□□□ -2.01
CHD9-213ENST00000564845 AGRNO00468 2067 aa2.52□□□□□ -2.01
CHD9-213ENST00000564845 SLURP1P55000 103 aa2.52□□□□□ -2.01
CHD9-213ENST00000564845 GTSF1Q8WW33 167 aa2.52□□□□□ -2.01
CHD9-213ENST00000564845 V9GYV3 84 aa2.52□□□□□ -2.01
CHD9-213ENST00000564845 IGHV7-81A0A0B4J1V7 117 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms