RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 CYB561D1Q8N8Q1 229 aa3.43□□□□□ -1.86
HERPUD1-208ENST00000563911 S100ZQ8WXG8 99 aa3.43□□□□□ -1.86
HERPUD1-208ENST00000563911 SCGB3A2Q96PL1 93 aa3.43□□□□□ -1.86
HERPUD1-208ENST00000563911 PRADC1Q9BSG0 188 aa3.43□□□□□ -1.86
HERPUD1-208ENST00000563911 PSG8Q9UQ74 426 aa3.43□□□□□ -1.86
HERPUD1-208ENST00000563911 FSIP2Q5CZC0 6907 aa3.42□□□□□ -1.86
HERPUD1-208ENST00000563911 A0A0D9SG52 128 aa3.42□□□□□ -1.86
HERPUD1-208ENST00000563911 IGSF23A1L1A6 192 aa3.42□□□□□ -1.86
HERPUD1-208ENST00000563911 IL7P13232 177 aa3.42□□□□□ -1.86
HERPUD1-208ENST00000563911 DDTP30046 118 aa3.42□□□□□ -1.86
HERPUD1-208ENST00000563911 S100A11P31949 105 aa3.42□□□□□ -1.86
HERPUD1-208ENST00000563911 TAS2R30P59541 319 aa3.42□□□□□ -1.86
HERPUD1-208ENST00000563911 RANP62826 216 aaKnown RBP3.42□□□□□ -1.86
HERPUD1-208ENST00000563911 PRR3P79522 188 aaKnown RBP3.42□□□□□ -1.86
HERPUD1-208ENST00000563911 SPACA4Q8TDM5 124 aa3.42□□□□□ -1.86
HERPUD1-208ENST00000563911 C15orf40Q8WUR7 153 aa3.42□□□□□ -1.86
HERPUD1-208ENST00000563911 SFRP2Q96HF1 295 aa3.42□□□□□ -1.86
HERPUD1-208ENST00000563911 DIRAS2Q96HU8 199 aa3.42□□□□□ -1.86
HERPUD1-208ENST00000563911 PLAC8Q9NZF1 115 aa3.42□□□□□ -1.86
HERPUD1-208ENST00000563911 PRO0461Q9UI25 63 aa3.42□□□□□ -1.86
HERPUD1-208ENST00000563911 A0A087WXM4 84 aa3.41□□□□□ -1.86
HERPUD1-208ENST00000563911 TLX1NBP0CAT3 122 aa3.41□□□□□ -1.86
HERPUD1-208ENST00000563911 RAB5BP61020 215 aa3.41□□□□□ -1.86
HERPUD1-208ENST00000563911 IAH1Q2TAA2 248 aaPredicted RBP3.41□□□□□ -1.86
HERPUD1-208ENST00000563911 C9orf62Q8N4C0 152 aa3.41□□□□□ -1.86
HERPUD1-208ENST00000563911 MCFD2Q8NI22 146 aa3.41□□□□□ -1.86
HERPUD1-208ENST00000563911 LYPD6BQ8NI32 183 aa3.41□□□□□ -1.86
HERPUD1-208ENST00000563911 UBE2L5PA0A1B0GUS4 154 aa3.4□□□□□ -1.87
HERPUD1-208ENST00000563911 RBAKDNA6NC62 111 aa3.4□□□□□ -1.87
HERPUD1-208ENST00000563911 M0QXV9 152 aa3.4□□□□□ -1.87
HERPUD1-208ENST00000563911 HLA-DQA1P01909 254 aa3.4□□□□□ -1.87
HERPUD1-208ENST00000563911 MGST1P10620 155 aaKnown RBP3.4□□□□□ -1.87
HERPUD1-208ENST00000563911 GNG5P63218 68 aa3.4□□□□□ -1.87
HERPUD1-208ENST00000563911 IL15RAQ13261 267 aa3.4□□□□□ -1.87
HERPUD1-208ENST00000563911 MPV17L2Q567V2 206 aa3.4□□□□□ -1.87
HERPUD1-208ENST00000563911 CLLU1Q5K131 121 aa3.4□□□□□ -1.87
HERPUD1-208ENST00000563911 ASB13Q8WXK3 278 aa3.4□□□□□ -1.87
HERPUD1-208ENST00000563911 PTH2Q96A98 100 aa3.4□□□□□ -1.87
HERPUD1-208ENST00000563911 RMI2Q96E14 147 aa3.4□□□□□ -1.87
HERPUD1-208ENST00000563911 C2orf50Q96LR7 162 aa3.4□□□□□ -1.87
HERPUD1-208ENST00000563911 UQCC1Q9NVA1 299 aa3.4□□□□□ -1.87
HERPUD1-208ENST00000563911 CRCT1Q9UGL9 99 aa3.4□□□□□ -1.87
HERPUD1-208ENST00000563911 HSPB11Q9Y547 144 aa3.4□□□□□ -1.87
HERPUD1-208ENST00000563911 V9GYH0 126 aa3.4□□□□□ -1.87
HERPUD1-208ENST00000563911 TRAV21A0A0B4J279 112 aa3.39□□□□□ -1.87
HERPUD1-208ENST00000563911 K7ERU9 68 aa3.39□□□□□ -1.87
HERPUD1-208ENST00000563911 FGF7P21781 194 aa3.39□□□□□ -1.87
HERPUD1-208ENST00000563911 AKR1C3P42330 323 aa3.39□□□□□ -1.87
HERPUD1-208ENST00000563911 RAB5CP51148 216 aa3.39□□□□□ -1.87
HERPUD1-208ENST00000563911 RPS20P60866 119 aaKnown RBP3.39□□□□□ -1.87
HERPUD1-208ENST00000563911 CNBPP62633 177 aaKnown RBP3.39□□□□□ -1.87
HERPUD1-208ENST00000563911 CLPSL2Q6UWE3 100 aa3.39□□□□□ -1.87
HERPUD1-208ENST00000563911 NTM-AS1Q6ZSK4 140 aa3.39□□□□□ -1.87
HERPUD1-208ENST00000563911 ZC2HC1AQ96GY0 325 aa3.39□□□□□ -1.87
HERPUD1-208ENST00000563911 HYLS1Q96M11 299 aa3.39□□□□□ -1.87
HERPUD1-208ENST00000563911 NPCDR1Q9BY65 106 aa3.39□□□□□ -1.87
HERPUD1-208ENST00000563911 SLIRPQ9GZT3 109 aaKnown RBP3.39□□□□□ -1.87
HERPUD1-208ENST00000563911 MED9Q9NWA0 146 aa3.39□□□□□ -1.87
HERPUD1-208ENST00000563911 LENEPQ9Y5L5 61 aa3.39□□□□□ -1.87
HERPUD1-208ENST00000563911 A0A087WWC5 75 aa3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 C20orf202A1L168 122 aa3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 PGPA6NDG6 321 aa3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 SMKR1H3BMG3 65 aa3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 M0R143 59 aa3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 SSNA1O43805 119 aa3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 IFNA7P01567 189 aa3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 PVALBP20472 110 aaPredicted RBP3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 UBE2D3P61077 147 aa3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 UBE2D2P62837 147 aa3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 COX6A2Q02221 97 aa3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 BAXQ07812 192 aa3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 ZNF726P1Q15940 193 aa3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 PDZD11Q5EBL8 140 aa3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 SPINK6Q6UWN8 80 aa3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 GOLT1AQ6ZVE7 132 aa3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 INO80EQ8NBZ0 244 aaPredicted RBP3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 DPH3Q96FX2 82 aa3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 SLC25A21Q9BQT8 299 aaPredicted RBP3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 DPH3P1Q9H4G8 78 aa3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 LSM5Q9Y4Y9 91 aaKnown RBP3.38□□□□□ -1.87
HERPUD1-208ENST00000563911 IGLV10-54A0A075B6I4 117 aa3.37□□□□□ -1.87
HERPUD1-208ENST00000563911 A0A087WX48 190 aa3.37□□□□□ -1.87
HERPUD1-208ENST00000563911 A0A1B0GVX0 72 aa3.37□□□□□ -1.87
HERPUD1-208ENST00000563911 C1orf196B1AJZ1 125 aa3.37□□□□□ -1.87
HERPUD1-208ENST00000563911 TMEM262E9PQX1 116 aa3.37□□□□□ -1.87
HERPUD1-208ENST00000563911 NDUFB6O95139 128 aa3.37□□□□□ -1.87
HERPUD1-208ENST00000563911 SULT1A1P50225 295 aa3.37□□□□□ -1.87
HERPUD1-208ENST00000563911 CRIP1P50238 77 aa3.37□□□□□ -1.87
HERPUD1-208ENST00000563911 DEFA1P59665 94 aa3.37□□□□□ -1.87
HERPUD1-208ENST00000563911 DEFA3P59666 94 aa3.37□□□□□ -1.87
HERPUD1-208ENST00000563911 Q0VG73 95 aa3.37□□□□□ -1.87
HERPUD1-208ENST00000563911 LINC00269Q8N2A0 174 aa3.37□□□□□ -1.87
HERPUD1-208ENST00000563911 TOMM5Q8N4H5 51 aa3.37□□□□□ -1.87
HERPUD1-208ENST00000563911 NDFIP1Q9BT67 221 aa3.37□□□□□ -1.87
HERPUD1-208ENST00000563911 CCDC32Q9BV29 185 aa3.37□□□□□ -1.87
HERPUD1-208ENST00000563911 MAP1LC3CQ9BXW4 147 aa3.37□□□□□ -1.87
HERPUD1-208ENST00000563911 RPP21Q9H633 154 aaKnown RBP3.37□□□□□ -1.87
HERPUD1-208ENST00000563911 SPANXA1Q9NS26 97 aa3.37□□□□□ -1.87
HERPUD1-208ENST00000563911 TRBV6-8A0A0A6YYG3 113 aa3.36□□□□□ -1.87
HERPUD1-208ENST00000563911 PIGBOS1A0A0B4J2F0 54 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms