RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 LINC01546A6NGU7 62 aa5.77□□□□□ -1.49
SMG1-209ENST00000563836 PRSS2P07478 247 aa5.77□□□□□ -1.49
SMG1-209ENST00000563836 CRYBA4P53673 196 aa5.77□□□□□ -1.49
SMG1-209ENST00000563836 PKIAP61925 76 aa5.77□□□□□ -1.49
SMG1-209ENST00000563836 PMCHL1Q16048 86 aa5.77□□□□□ -1.49
SMG1-209ENST00000563836 AMMECR1LQ6DCA0 310 aa5.77□□□□□ -1.49
SMG1-209ENST00000563836 C2orf66Q6UXQ4 117 aa5.77□□□□□ -1.49
SMG1-209ENST00000563836 ATP6V0E2Q8NHE4 81 aa5.77□□□□□ -1.49
SMG1-209ENST00000563836 PHLDA1Q8WV24 401 aaPredicted RBP5.77□□□□□ -1.49
SMG1-209ENST00000563836 IFI27L1Q96BM0 104 aa5.77□□□□□ -1.49
SMG1-209ENST00000563836 TMEM141Q96I45 108 aa5.77□□□□□ -1.49
SMG1-209ENST00000563836 TRAV10A0A0B4J240 114 aa5.76□□□□□ -1.49
SMG1-209ENST00000563836 NUPR1O60356 82 aa5.76□□□□□ -1.49
SMG1-209ENST00000563836 GAS8-AS1O95177 125 aa5.76□□□□□ -1.49
SMG1-209ENST00000563836 SMIM6P0DI80 62 aa5.76□□□□□ -1.49
SMG1-209ENST00000563836 P0DMU3 169 aa5.76□□□□□ -1.49
SMG1-209ENST00000563836 FAM231AP0DMU4 169 aa5.76□□□□□ -1.49
SMG1-209ENST00000563836 FAM231CP0DMU5 169 aa5.76□□□□□ -1.49
SMG1-209ENST00000563836 GTSF1LQ9H1H1 148 aa5.76□□□□□ -1.49
SMG1-209ENST00000563836 IGLV2-18A0A075B6J9 118 aa5.75□□□□□ -1.49
SMG1-209ENST00000563836 TRAV26-1A0A087WT03 109 aa5.75□□□□□ -1.49
SMG1-209ENST00000563836 DEFB131BA0A096LNP1 70 aa5.75□□□□□ -1.49
SMG1-209ENST00000563836 IGHV3-38A0A0C4DH36 116 aa5.75□□□□□ -1.49
SMG1-209ENST00000563836 A0A0J9YY99 117 aa5.75□□□□□ -1.49
SMG1-209ENST00000563836 H7C423 109 aa5.75□□□□□ -1.49
SMG1-209ENST00000563836 UBE2D3P61077 147 aa5.75□□□□□ -1.49
SMG1-209ENST00000563836 UBE2D2P62837 147 aa5.75□□□□□ -1.49
SMG1-209ENST00000563836 DEFA6Q01524 100 aa5.75□□□□□ -1.49
SMG1-209ENST00000563836 C12orf74Q32Q52 190 aa5.75□□□□□ -1.49
SMG1-209ENST00000563836 NEGR1Q7Z3B1 354 aa5.75□□□□□ -1.49
SMG1-209ENST00000563836 ERASQ7Z444 233 aa5.75□□□□□ -1.49
SMG1-209ENST00000563836 TOMM6Q96B49 74 aa5.75□□□□□ -1.49
SMG1-209ENST00000563836 C2orf88Q9BSF0 95 aa5.75□□□□□ -1.49
SMG1-209ENST00000563836 TMEM243Q9BU79 118 aa5.75□□□□□ -1.49
SMG1-209ENST00000563836 CELA1Q9UNI1 258 aa5.75□□□□□ -1.49
SMG1-209ENST00000563836 GAGE10A6NGK3 116 aa5.74□□□□□ -1.49
SMG1-209ENST00000563836 H3BNG1 76 aa5.74□□□□□ -1.49
SMG1-209ENST00000563836 SYS1-DBNDD2H3BUS1 97 aa5.74□□□□□ -1.49
SMG1-209ENST00000563836 JOSD1Q15040 202 aaPredicted RBP5.74□□□□□ -1.49
SMG1-209ENST00000563836 TIMM17AQ99595 171 aa5.74□□□□□ -1.49
SMG1-209ENST00000563836 CHCHD5Q9BSY4 110 aa5.74□□□□□ -1.49
SMG1-209ENST00000563836 SPANXA1Q9NS26 97 aa5.74□□□□□ -1.49
SMG1-209ENST00000563836 IGLV5-52A0A0A0MRZ9 124 aa5.73□□□□□ -1.49
SMG1-209ENST00000563836 TRAV8-6A0A0B4J262 113 aa5.73□□□□□ -1.49
SMG1-209ENST00000563836 TMEM262E9PQX1 116 aa5.73□□□□□ -1.49
SMG1-209ENST00000563836 TSHBP01222 138 aa5.73□□□□□ -1.49
SMG1-209ENST00000563836 C3orf79P0CE67 100 aa5.73□□□□□ -1.49
SMG1-209ENST00000563836 SERTAD4-AS1Q5TG53 156 aa5.73□□□□□ -1.49
SMG1-209ENST00000563836 Q6ZTC4 211 aa5.73□□□□□ -1.49
SMG1-209ENST00000563836 LINC00518Q8N0U6 118 aa5.73□□□□□ -1.49
SMG1-209ENST00000563836 C15orf53Q8NAA6 179 aa5.73□□□□□ -1.49
SMG1-209ENST00000563836 C20orf203Q8NBC4 194 aa5.73□□□□□ -1.49
SMG1-209ENST00000563836 PCP4L1A6NKN8 68 aa5.72□□□□□ -1.49
SMG1-209ENST00000563836 ZNF25P17030 456 aaPredicted RBP5.72□□□□□ -1.49
SMG1-209ENST00000563836 LBHQ53QV2 105 aaPredicted RBP5.72□□□□□ -1.49
SMG1-209ENST00000563836 TEX43Q6ZNM6 134 aa5.72□□□□□ -1.49
SMG1-209ENST00000563836 OR5A1Q8NGJ0 315 aa5.72□□□□□ -1.49
SMG1-209ENST00000563836 PYGO1Q9Y3Y4 419 aa5.72□□□□□ -1.49
SMG1-209ENST00000563836 VWFP04275 2813 aa5.71□□□□□ -1.49
SMG1-209ENST00000563836 A0A087WX48 190 aa5.71□□□□□ -1.5
SMG1-209ENST00000563836 TRBV6-8A0A0A6YYG3 113 aa5.71□□□□□ -1.5
SMG1-209ENST00000563836 TRAV12-1A0A0B4J245 112 aa5.71□□□□□ -1.5
SMG1-209ENST00000563836 LOC100131303A0A0U1RQF7 123 aa5.71□□□□□ -1.5
SMG1-209ENST00000563836 IFITM10A6NMD0 228 aa5.71□□□□□ -1.5
SMG1-209ENST00000563836 PLNP26678 52 aa5.71□□□□□ -1.5
SMG1-209ENST00000563836 SEC11AP67812 179 aa5.71□□□□□ -1.5
SMG1-209ENST00000563836 PMVKQ15126 192 aa5.71□□□□□ -1.5
SMG1-209ENST00000563836 LGALS9CQ6DKI2 356 aa5.71□□□□□ -1.5
SMG1-209ENST00000563836 SPATA12Q7Z6I5 190 aa5.71□□□□□ -1.5
SMG1-209ENST00000563836 DEFB104AQ8WTQ1 72 aa5.71□□□□□ -1.5
SMG1-209ENST00000563836 C12orf57Q99622 126 aa5.71□□□□□ -1.5
SMG1-209ENST00000563836 VAMP8Q9BV40 100 aa5.71□□□□□ -1.5
SMG1-209ENST00000563836 TIMM21Q9BVV7 248 aa5.71□□□□□ -1.5
SMG1-209ENST00000563836 KLK5Q9Y337 293 aaPredicted RBP5.71□□□□□ -1.5
SMG1-209ENST00000563836 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.7□□□□□ -1.5
SMG1-209ENST00000563836 A0A096LPF7 62 aa5.7□□□□□ -1.5
SMG1-209ENST00000563836 IGKV2-29A2NJV5 120 aaPredicted RBP5.7□□□□□ -1.5
SMG1-209ENST00000563836 DPM2O94777 84 aa5.7□□□□□ -1.5
SMG1-209ENST00000563836 IGKCP01834 107 aa5.7□□□□□ -1.5
SMG1-209ENST00000563836 HERVK_113P61574 105 aa5.7□□□□□ -1.5
SMG1-209ENST00000563836 RPL39P62891 51 aaKnown RBP5.7□□□□□ -1.5
SMG1-209ENST00000563836 A0A096LNJ9 63 aa5.69□□□□□ -1.5
SMG1-209ENST00000563836 NUPR2A6NF83 97 aa5.69□□□□□ -1.5
SMG1-209ENST00000563836 F8VRH5 84 aa5.69□□□□□ -1.5
SMG1-209ENST00000563836 TSTD3H0UI37 97 aa5.69□□□□□ -1.5
SMG1-209ENST00000563836 FGF6P10767 208 aa5.69□□□□□ -1.5
SMG1-209ENST00000563836 CCL18P55774 89 aa5.69□□□□□ -1.5
SMG1-209ENST00000563836 GAGE6Q13070 117 aa5.69□□□□□ -1.5
SMG1-209ENST00000563836 LELP1Q5T871 98 aa5.69□□□□□ -1.5
SMG1-209ENST00000563836 VSIG2Q96IQ7 327 aa5.69□□□□□ -1.5
SMG1-209ENST00000563836 CHCHD7Q9BUK0 85 aa5.69□□□□□ -1.5
SMG1-209ENST00000563836 PAM16Q9Y3D7 125 aa5.69□□□□□ -1.5
SMG1-209ENST00000563836 CSDC2Q9Y534 153 aaKnown RBP5.69□□□□□ -1.5
SMG1-209ENST00000563836 TRRAPQ9Y4A5 3859 aa5.69□□□□□ -1.5
SMG1-209ENST00000563836 MRPS36P82909 103 aaKnown RBP5.68□□□□□ -1.5
SMG1-209ENST00000563836 PYY3Q5JQD4 70 aa5.68□□□□□ -1.5
SMG1-209ENST00000563836 LINC01545Q5VT33 79 aa5.68□□□□□ -1.5
SMG1-209ENST00000563836 MRPL52Q86TS9 123 aaKnown RBP5.68□□□□□ -1.5
SMG1-209ENST00000563836 BAALCQ8WXS3 180 aa5.68□□□□□ -1.5
SMG1-209ENST00000563836 GEMIN7Q9H840 131 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms