RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 PRSS29PA6NIE9 313 aa15.18■□□□□ 0.02
LINC01960-201ENST00000563759 RNASE13Q5GAN3 156 aaKnown RBP15.18■□□□□ 0.02
LINC01960-201ENST00000563759 CHTOPQ9Y3Y2 248 aaKnown RBP15.18■□□□□ 0.02
LINC01960-201ENST00000563759 OR5A1Q8NGJ0 315 aa15.18■□□□□ 0.02
LINC01960-201ENST00000563759 TMEM101Q96IK0 257 aa15.18■□□□□ 0.02
LINC01960-201ENST00000563759 VAMP8Q9BV40 100 aa15.18■□□□□ 0.02
LINC01960-201ENST00000563759 F8VRH5 84 aa15.17■□□□□ 0.02
LINC01960-201ENST00000563759 CST9LQ9H4G1 147 aa15.17■□□□□ 0.02
LINC01960-201ENST00000563759 CSDC2Q9Y534 153 aaKnown RBP15.17■□□□□ 0.02
LINC01960-201ENST00000563759 PCP4L1A6NKN8 68 aa15.16■□□□□ 0.02
LINC01960-201ENST00000563759 ZNF25P17030 456 aaPredicted RBP15.16■□□□□ 0.02
LINC01960-201ENST00000563759 MRPS36P82909 103 aaKnown RBP15.16■□□□□ 0.02
LINC01960-201ENST00000563759 FAM104AQ969W3 186 aa15.16■□□□□ 0.02
LINC01960-201ENST00000563759 DPM2O94777 84 aa15.15■□□□□ 0.02
LINC01960-201ENST00000563759 LELP1Q5T871 98 aa15.15■□□□□ 0.02
LINC01960-201ENST00000563759 TMEM262E9PQX1 116 aa15.14■□□□□ 0.01
LINC01960-201ENST00000563759 IGKCP01834 107 aa15.14■□□□□ 0.01
LINC01960-201ENST00000563759 PLNP26678 52 aa15.14■□□□□ 0.01
LINC01960-201ENST00000563759 LYPD5Q6UWN5 251 aa15.14■□□□□ 0.01
LINC01960-201ENST00000563759 C15orf53Q8NAA6 179 aa15.14■□□□□ 0.01
LINC01960-201ENST00000563759 AMELXQ99217 191 aa15.14■□□□□ 0.01
LINC01960-201ENST00000563759 C2orf88Q9BSF0 95 aa15.14■□□□□ 0.01
LINC01960-201ENST00000563759 PAM16Q9Y3D7 125 aa15.14■□□□□ 0.01
LINC01960-201ENST00000563759 TRAV9-2A0A087WT02 112 aa15.12■□□□□ 0.01
LINC01960-201ENST00000563759 IGLL5B9A064 214 aa15.12■□□□□ 0.01
LINC01960-201ENST00000563759 HSBP1L1C9JCN9 74 aa15.12■□□□□ 0.01
LINC01960-201ENST00000563759 MAJINQ3KP22 176 aa15.12■□□□□ 0.01
LINC01960-201ENST00000563759 ZNF664Q8N3J9 261 aa15.12■□□□□ 0.01
LINC01960-201ENST00000563759 CDC42SE2Q9NRR3 84 aa15.12■□□□□ 0.01
LINC01960-201ENST00000563759 TIRAPP58753 221 aa15.12■□□□□ 0.01
LINC01960-201ENST00000563759 hDV102S1A0JD36 115 aa15.11■□□□□ 0.01
LINC01960-201ENST00000563759 MPV17L2Q567V2 206 aa15.11■□□□□ 0.01
LINC01960-201ENST00000563759 IGLV4-69A0A075B6H9 119 aa15.1■□□□□ 0.01
LINC01960-201ENST00000563759 IGLV4-60A0A075B6I1 120 aa15.1■□□□□ 0.01
LINC01960-201ENST00000563759 TRAV8-6A0A0B4J262 113 aa15.1■□□□□ 0.01
LINC01960-201ENST00000563759 FBN3Q75N90 2809 aa15.09■□□□□ 0.01
LINC01960-201ENST00000563759 SPATA45Q537H7 98 aa15.09■□□□□ 0.01
LINC01960-201ENST00000563759 PKIAP61925 76 aa15.08■□□□□ 0.01
LINC01960-201ENST00000563759 RBX1P62877 108 aa15.08■□□□□ 0.01
LINC01960-201ENST00000563759 A0A1B0GUV1 79 aa15.08■□□□□ 0
LINC01960-201ENST00000563759 ESRGQ1W209 222 aa15.08■□□□□ 0
LINC01960-201ENST00000563759 CHAC1Q9BUX1 264 aa15.08■□□□□ 0
LINC01960-201ENST00000563759 C11orf86A6NJI1 115 aa15.07■□□□□ 0
LINC01960-201ENST00000563759 A0A0J9YXV3 536 aa15.06■□□□□ 0
LINC01960-201ENST00000563759 STPG4Q8N801 248 aa15.06■□□□□ 0
LINC01960-201ENST00000563759 TRAV13-1A0A0B4J241 112 aa15.05■□□□□ -0
LINC01960-201ENST00000563759 IGLC3P0DOY3 106 aa15.05■□□□□ -0
LINC01960-201ENST00000563759 IGKV3OR2-268A0A0C4DH90 116 aa15.04■□□□□ -0
LINC01960-201ENST00000563759 UBE2D1P51668 147 aa15.04■□□□□ -0
LINC01960-201ENST00000563759 TCTAP57738 103 aa15.04■□□□□ -0
LINC01960-201ENST00000563759 NFE4Q86UQ8 179 aa15.04■□□□□ -0
LINC01960-201ENST00000563759 Q8N3U1 123 aa15.03■□□□□ -0
LINC01960-201ENST00000563759 PRO1933Q9H354 126 aa15.03■□□□□ -0
LINC01960-201ENST00000563759 TMEM170BQ5T4T1 132 aa15.03■□□□□ -0
LINC01960-201ENST00000563759 WFDC10BQ8IUB3 73 aa15.03■□□□□ -0
LINC01960-201ENST00000563759 TSTD3H0UI37 97 aa15.02■□□□□ -0
LINC01960-201ENST00000563759 ANGP03950 147 aaKnown RBP15.02■□□□□ -0
LINC01960-201ENST00000563759 NUPR2A6NF83 97 aa15.01□□□□□ -0.01
LINC01960-201ENST00000563759 GEMIN7Q9H840 131 aaKnown RBP15.01□□□□□ -0.01
LINC01960-201ENST00000563759 TINCRA0A1B0GVN0 87 aa15.01□□□□□ -0.01
LINC01960-201ENST00000563759 ANKRD39Q53RE8 183 aa15.01□□□□□ -0.01
LINC01960-201ENST00000563759 CCL18P55774 89 aa15□□□□□ -0.01
LINC01960-201ENST00000563759 CLPSL2Q6UWE3 100 aa15□□□□□ -0.01
LINC01960-201ENST00000563759 DNAH7Q8WXX0 4024 aa14.99□□□□□ -0.01
LINC01960-201ENST00000563759 SEC11AP67812 179 aa14.99□□□□□ -0.01
LINC01960-201ENST00000563759 IGHV3-30P01768 117 aa14.99□□□□□ -0.01
LINC01960-201ENST00000563759 IGHV3-33P01772 117 aa14.99□□□□□ -0.01
LINC01960-201ENST00000563759 IGHV3-30-3P0DP02 117 aa14.99□□□□□ -0.01
LINC01960-201ENST00000563759 IGHV3-30-5P0DP03 117 aa14.99□□□□□ -0.01
LINC01960-201ENST00000563759 ZNF22P17026 224 aaPredicted RBP14.99□□□□□ -0.01
LINC01960-201ENST00000563759 LINC00269Q8N2A0 174 aa14.99□□□□□ -0.01
LINC01960-201ENST00000563759 HERVK_113P63121 156 aa14.98□□□□□ -0.01
LINC01960-201ENST00000563759 LINC00242Q5T6M2 205 aa14.98□□□□□ -0.01
LINC01960-201ENST00000563759 KLK5Q9Y337 293 aaPredicted RBP14.98□□□□□ -0.01
LINC01960-201ENST00000563759 CSMD3Q7Z407 3707 aa14.98□□□□□ -0.01
LINC01960-201ENST00000563759 HERVK_113P61574 105 aa14.97□□□□□ -0.01
LINC01960-201ENST00000563759 NMUP48645 174 aa14.97□□□□□ -0.01
LINC01960-201ENST00000563759 FAM19A3Q7Z5A8 133 aa14.97□□□□□ -0.01
LINC01960-201ENST00000563759 LINC00588Q9Y4M8 146 aa14.97□□□□□ -0.01
LINC01960-201ENST00000563759 REG3AQ06141 175 aa14.96□□□□□ -0.01
LINC01960-201ENST00000563759 MRPS16Q9Y3D3 137 aaKnown RBP14.96□□□□□ -0.01
LINC01960-201ENST00000563759 C14orf144Q96I85 54 aa14.95□□□□□ -0.02
LINC01960-201ENST00000563759 TGP01266 2768 aa14.95□□□□□ -0.02
LINC01960-201ENST00000563759 LINC00959A0A1B0GUT2 108 aa14.95□□□□□ -0.02
LINC01960-201ENST00000563759 KLK12Q9UKR0 248 aa14.95□□□□□ -0.02
LINC01960-201ENST00000563759 COX6A2Q02221 97 aa14.94□□□□□ -0.02
LINC01960-201ENST00000563759 APLNQ9ULZ1 77 aa14.94□□□□□ -0.02
LINC01960-201ENST00000563759 DYNC2H1Q8NCM8 4307 aaKnown RBP14.93□□□□□ -0.02
LINC01960-201ENST00000563759 IGKV2D-26A0A0A0MRZ7 120 aa14.93□□□□□ -0.02
LINC01960-201ENST00000563759 SS18Q15532 418 aa14.93□□□□□ -0.02
LINC01960-201ENST00000563759 CDKN2A-AS1Q9UH64 79 aa14.93□□□□□ -0.02
LINC01960-201ENST00000563759 IGLV5-45A0A087WSX0 123 aa14.93□□□□□ -0.02
LINC01960-201ENST00000563759 TMEM223A0PJW6 202 aa14.93□□□□□ -0.02
LINC01960-201ENST00000563759 H3BRM9 83 aa14.93□□□□□ -0.02
LINC01960-201ENST00000563759 LINC01556Q5JQF7 62 aa14.93□□□□□ -0.02
LINC01960-201ENST00000563759 E9PLD3 99 aa14.92□□□□□ -0.02
LINC01960-201ENST00000563759 CRPP02741 224 aa14.92□□□□□ -0.02
LINC01960-201ENST00000563759 IGHV3-64A0A075B6Q5 118 aa14.91□□□□□ -0.02
LINC01960-201ENST00000563759 UQCR10Q9UDW1 63 aa14.91□□□□□ -0.02
LINC01960-201ENST00000563759 LINC00587B1AMM8 73 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms