RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 POM121L12Q8N7R1 296 aa7.73□□□□□ -1.17
RNF40-204ENST00000563683 PFN2P35080 140 aa7.72□□□□□ -1.17
RNF40-204ENST00000563683 TMEM243Q9BU79 118 aa7.72□□□□□ -1.17
RNF40-204ENST00000563683 TRBV30A0A0K0K1B3 111 aa7.72□□□□□ -1.17
RNF40-204ENST00000563683 ZNF843Q8N446 348 aa7.72□□□□□ -1.17
RNF40-204ENST00000563683 Q9H8V8 135 aa7.72□□□□□ -1.17
RNF40-204ENST00000563683 LGALS9O00182 355 aa7.71□□□□□ -1.17
RNF40-204ENST00000563683 MALP21145 153 aa7.71□□□□□ -1.17
RNF40-204ENST00000563683 POLR2KP53803 58 aaKnown RBP7.71□□□□□ -1.17
RNF40-204ENST00000563683 KLK9Q2XQG4 91 aa7.71□□□□□ -1.17
RNF40-204ENST00000563683 TEX49A0A1B0GTD5 131 aa7.71□□□□□ -1.18
RNF40-204ENST00000563683 AMELXQ99217 191 aa7.71□□□□□ -1.18
RNF40-204ENST00000563683 H3BT86 120 aa7.71□□□□□ -1.18
RNF40-204ENST00000563683 ODF3Q96PU9 254 aa7.71□□□□□ -1.18
RNF40-204ENST00000563683 ZNF702PQ9H963 129 aa7.71□□□□□ -1.18
RNF40-204ENST00000563683 IGHV3-30-3P0DP02 117 aa7.7□□□□□ -1.18
RNF40-204ENST00000563683 TMEM126AQ9H061 195 aa7.7□□□□□ -1.18
RNF40-204ENST00000563683 TMEM223A0PJW6 202 aa7.7□□□□□ -1.18
RNF40-204ENST00000563683 CLPSL2Q6UWE3 100 aa7.7□□□□□ -1.18
RNF40-204ENST00000563683 SPANXDQ9BXN6 97 aa7.7□□□□□ -1.18
RNF40-204ENST00000563683 DNAJC9-AS1A6NH13 148 aa7.7□□□□□ -1.18
RNF40-204ENST00000563683 C4orf3Q8WVX3 66 aa7.7□□□□□ -1.18
RNF40-204ENST00000563683 TRBV27A0A0K0K1C4 114 aa7.69□□□□□ -1.18
RNF40-204ENST00000563683 NXPH4O95158 308 aa7.69□□□□□ -1.18
RNF40-204ENST00000563683 DEFB114Q30KQ6 69 aa7.69□□□□□ -1.18
RNF40-204ENST00000563683 SHISA2Q6UWI4 295 aa7.69□□□□□ -1.18
RNF40-204ENST00000563683 FAM240AA0A1B0GVK7 77 aa7.69□□□□□ -1.18
RNF40-204ENST00000563683 SOCS3O14543 225 aa7.69□□□□□ -1.18
RNF40-204ENST00000563683 CRPP02741 224 aa7.69□□□□□ -1.18
RNF40-204ENST00000563683 HERVK_113P63121 156 aa7.69□□□□□ -1.18
RNF40-204ENST00000563683 COL12A1Q99715 3063 aa7.69□□□□□ -1.18
RNF40-204ENST00000563683 IGLV4-3A0A075B6K6 122 aa7.68□□□□□ -1.18
RNF40-204ENST00000563683 Q6ZSV7 163 aa7.68□□□□□ -1.18
RNF40-204ENST00000563683 Q6ZTI0 123 aa7.68□□□□□ -1.18
RNF40-204ENST00000563683 LAMA5O15230 3695 aa7.68□□□□□ -1.18
RNF40-204ENST00000563683 KIF25-AS1Q9Y6Z4 181 aa7.68□□□□□ -1.18
RNF40-204ENST00000563683 TRBV6-5A0A0K0K1A5 114 aa7.68□□□□□ -1.18
RNF40-204ENST00000563683 A8MZ25 164 aa7.68□□□□□ -1.18
RNF40-204ENST00000563683 TRIAP1O43715 76 aa7.68□□□□□ -1.18
RNF40-204ENST00000563683 C5orf38Q86SI9 138 aa7.68□□□□□ -1.18
RNF40-204ENST00000563683 ZNF22P17026 224 aaPredicted RBP7.67□□□□□ -1.18
RNF40-204ENST00000563683 ESM1Q9NQ30 184 aa7.67□□□□□ -1.18
RNF40-204ENST00000563683 DCHS1Q96JQ0 3298 aa7.67□□□□□ -1.18
RNF40-204ENST00000563683 LINC00315P59091 139 aa7.67□□□□□ -1.18
RNF40-204ENST00000563683 ICOSQ9Y6W8 199 aa7.67□□□□□ -1.18
RNF40-204ENST00000563683 FLNBO75369 2602 aaKnown RBP7.67□□□□□ -1.18
RNF40-204ENST00000563683 RBMY1BA6NDE4 496 aaKnown RBP7.67□□□□□ -1.18
RNF40-204ENST00000563683 RBMY1EA6NEQ0 496 aaKnown RBP7.67□□□□□ -1.18
RNF40-204ENST00000563683 RBMY1DP0C7P1 496 aaKnown RBP7.67□□□□□ -1.18
RNF40-204ENST00000563683 RBMY1A1P0DJD3 496 aaKnown RBP7.67□□□□□ -1.18
RNF40-204ENST00000563683 RBMY1CP0DJD4 496 aa7.67□□□□□ -1.18
RNF40-204ENST00000563683 LINC00467Q9BRT7 94 aa7.67□□□□□ -1.18
RNF40-204ENST00000563683 TMEM86BQ8N661 226 aa7.66□□□□□ -1.18
RNF40-204ENST00000563683 RNF152Q8N8N0 203 aa7.66□□□□□ -1.18
RNF40-204ENST00000563683 DNAJC30Q96LL9 226 aa7.66□□□□□ -1.18
RNF40-204ENST00000563683 C9orf85Q96MD7 179 aa7.66□□□□□ -1.18
RNF40-204ENST00000563683 A0A0J9YXY3 114 aa7.66□□□□□ -1.18
RNF40-204ENST00000563683 K7EQD1 137 aa7.66□□□□□ -1.18
RNF40-204ENST00000563683 EIF4EBP3O60516 100 aaPredicted RBP7.66□□□□□ -1.18
RNF40-204ENST00000563683 CDKN2A-AS1Q9UH64 79 aa7.66□□□□□ -1.18
RNF40-204ENST00000563683 IGHV1-58A0A0C4DH39 117 aa7.65□□□□□ -1.18
RNF40-204ENST00000563683 H7C423 109 aa7.65□□□□□ -1.18
RNF40-204ENST00000563683 ACYP1P07311 99 aa7.65□□□□□ -1.18
RNF40-204ENST00000563683 FAM19A4Q96LR4 140 aa7.65□□□□□ -1.18
RNF40-204ENST00000563683 ZFHX4Q86UP3 3567 aa7.65□□□□□ -1.18
RNF40-204ENST00000563683 F5H768 121 aa7.65□□□□□ -1.18
RNF40-204ENST00000563683 XCL1P47992 114 aa7.65□□□□□ -1.18
RNF40-204ENST00000563683 SS18Q15532 418 aa7.65□□□□□ -1.19
RNF40-204ENST00000563683 VSIG2Q96IQ7 327 aa7.65□□□□□ -1.19
RNF40-204ENST00000563683 TRBV7-7A0A0K0K1E9 115 aa7.64□□□□□ -1.19
RNF40-204ENST00000563683 DEFB4AO15263 64 aa7.64□□□□□ -1.19
RNF40-204ENST00000563683 IMUPQ9GZP8 106 aa7.64□□□□□ -1.19
RNF40-204ENST00000563683 WFDC10AQ9H1F0 79 aa7.64□□□□□ -1.19
RNF40-204ENST00000563683 C3orf56Q8N813 242 aa7.64□□□□□ -1.19
RNF40-204ENST00000563683 DEFB121Q5J5C9 76 aa7.64□□□□□ -1.19
RNF40-204ENST00000563683 HECTD1Q9ULT8 2610 aa7.64□□□□□ -1.19
RNF40-204ENST00000563683 DAD1P61803 113 aa7.63□□□□□ -1.19
RNF40-204ENST00000563683 DAZ2Q13117 558 aaKnown RBP7.63□□□□□ -1.19
RNF40-204ENST00000563683 DAZ4Q86SG3 579 aaKnown RBP7.63□□□□□ -1.19
RNF40-204ENST00000563683 DAZ3Q9NR90 486 aaKnown RBP7.63□□□□□ -1.19
RNF40-204ENST00000563683 SPANXCQ9NY87 97 aa7.63□□□□□ -1.19
RNF40-204ENST00000563683 TRAV25A0A0B4J276 109 aa7.62□□□□□ -1.19
RNF40-204ENST00000563683 BBC3Q96PG8 261 aaPredicted RBP7.62□□□□□ -1.19
RNF40-204ENST00000563683 LST1O00453 97 aa7.62□□□□□ -1.19
RNF40-204ENST00000563683 GYPEP15421 78 aa7.62□□□□□ -1.19
RNF40-204ENST00000563683 CLEC2BQ92478 149 aa7.62□□□□□ -1.19
RNF40-204ENST00000563683 C16orf74Q96GX8 76 aa7.62□□□□□ -1.19
RNF40-204ENST00000563683 CFAP46Q8IYW2 2715 aa7.62□□□□□ -1.19
RNF40-204ENST00000563683 ANGP03950 147 aaKnown RBP7.62□□□□□ -1.19
RNF40-204ENST00000563683 S100A7L2Q5SY68 101 aa7.62□□□□□ -1.19
RNF40-204ENST00000563683 LRRC75A-AS1Q8N1F1 130 aa7.62□□□□□ -1.19
RNF40-204ENST00000563683 IGLV10-54A0A075B6I4 117 aa7.61□□□□□ -1.19
RNF40-204ENST00000563683 MIAQ16674 131 aa7.61□□□□□ -1.19
RNF40-204ENST00000563683 FLNCQ14315 2725 aa7.61□□□□□ -1.19
RNF40-204ENST00000563683 ZNF580Q9UK33 172 aa7.61□□□□□ -1.19
RNF40-204ENST00000563683 FLNAP21333 2647 aaKnown RBP7.6□□□□□ -1.19
RNF40-204ENST00000563683 BRI3O95415 125 aa7.6□□□□□ -1.19
RNF40-204ENST00000563683 ATP5G1P05496 136 aa7.6□□□□□ -1.19
RNF40-204ENST00000563683 GAGE2AQ6NT46 116 aa7.6□□□□□ -1.19
RNF40-204ENST00000563683 FAM236AA0A1B0GUQ0 79 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms