RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 COX6A2Q02221 97 aa0.22□□□□□ -2.37
HMGB1P33-201ENST00000563485 SPAG11BQ08648 103 aa0.22□□□□□ -2.37
HMGB1P33-201ENST00000563485 COX17Q14061 63 aa0.22□□□□□ -2.37
HMGB1P33-201ENST00000563485 SPAG11AQ6PDA7 123 aa0.22□□□□□ -2.37
HMGB1P33-201ENST00000563485 MYOZ3Q8TDC0 251 aa0.22□□□□□ -2.37
HMGB1P33-201ENST00000563485 CNFNQ9BYD5 112 aa0.22□□□□□ -2.37
HMGB1P33-201ENST00000563485 LINC00472Q9H8W2 130 aa0.22□□□□□ -2.37
HMGB1P33-201ENST00000563485 CDC42SE2Q9NRR3 84 aa0.22□□□□□ -2.37
HMGB1P33-201ENST00000563485 LINC01558Q9Y6Z2 57 aa0.22□□□□□ -2.37
HMGB1P33-201ENST00000563485 KDM3BQ7LBC6 1761 aa0.22□□□□□ -2.37
HMGB1P33-201ENST00000563485 SPHKAPQ2M3C7 1700 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 TMEM262E9PQX1 116 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 HMGN4O00479 90 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 CFAP126Q5VTH2 177 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 UBE2DNLQ8IWF7 75 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 SVBPQ8N300 66 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 TCEAL7Q9BRU2 100 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 LINC00474Q9P2X8 69 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 V9GYH0 126 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 ZFYVE26Q68DK2 2539 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 SCAPERQ9BY12 1400 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 NSD3Q9BZ95 1437 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 RAPGEF6Q8TEU7 1601 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 WNK3Q9BYP7 1800 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 ARHGAP5Q13017 1502 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 GOLGA4Q13439 2230 aaKnown RBP0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 C20orf202A1L168 122 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 F8VRH5 84 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 SNAPC5O75971 98 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 UBE2D3P61077 147 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 UBE2D2P62837 147 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 HSD52Q0P140 79 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 BAGE2Q86Y30 109 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 C14orf144Q96I85 54 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 SPRR4Q96PI1 79 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 SHANK2Q9UPX8 1470 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 CSMD3Q7Z407 3707 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 PLXNB2O15031 1838 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 HMGXB3Q12766 1538 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 KIF21AQ7Z4S6 1674 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 A0A0D9SFI3 127 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 IGLC7A0M8Q6 106 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 NAP1L6A6NFF2 107 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 APOC3P02656 99 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 S100A1P23297 94 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 GTF2H5Q6ZYL4 71 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 UQCR10Q9UDW1 63 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 IGSF10Q6WRI0 2623 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 PSME4Q14997 1843 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 VPS8Q8N3P4 1428 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 SYNE1Q8NF91 8797 aaKnown RBP0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 ARHGEF5Q12774 1597 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 FAT4Q6V0I7 4981 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 EHBP1L1Q8N3D4 1523 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 ZNF292O60281 2723 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 SBF2Q86WG5 1849 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 PLCE1Q9P212 2302 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 LAMC1P11047 1609 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 IGF2RP11717 2491 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 TRAV22A0A0B4J277 110 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 CTXND1A0A1B0GTU2 59 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 ZNF815PA8K554 130 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 SFT2D2O95562 160 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 MGPP08493 103 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 COX6CP09669 75 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 SSBP3-AS1Q7Z2R9 100 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 TSLPQ969D9 159 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 ANKRD17O75179 2603 aaKnown RBP0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 UNC79Q9P2D8 2635 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 TCHHQ07283 1943 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 TET3O43151 1660 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 MYO7BQ6PIF6 2116 aa0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 BIVM-ERCC5R4GMW8 1640 aa0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 TRAV30A0A087WSZ9 112 aa0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 KRTDAPP60985 99 aa0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 Q5BKY6 102 aa0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 TMEM170BQ5T4T1 132 aa0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 ACBD7Q8N6N7 88 aa0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 TMEM263Q8WUH6 116 aaKnown RBP0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 NXT2Q9NPJ8 142 aaKnown RBP0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 PRDM15P57071 1507 aaPredicted RBP0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 HUWE1Q7Z6Z7 4374 aaKnown RBP0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 LRP6O75581 1613 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 GAPVD1Q14C86 1478 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 ZNF236Q9UL36 1845 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 TMEM218A2RU14 115 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 CHKB-CPT1BH3BT56 60 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 S100A3P33764 101 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 RBP2P50120 134 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 GNG11P61952 73 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 Q0VG73 95 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 C12orf57Q99622 126 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 LINC00846Q9NV44 126 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 PRO1854Q9UHT4 67 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 SPCS1Q9Y6A9 102 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 COL4A6Q14031 1691 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 TOPAZ1Q8N9V7 1692 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 AKAP6Q13023 2319 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 KMT2AQ03164 3969 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 NCOR2Q9Y618 2525 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms