RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 LINC00587B1AMM8 73 aa9.77□□□□□ -0.85
SMPD3-205ENST00000563455 PAX4O43316 350 aa9.77□□□□□ -0.85
SMPD3-205ENST00000563455 ZC2HC1BQ5TFG8 222 aa9.77□□□□□ -0.85
SMPD3-205ENST00000563455 TRBV6-8A0A0A6YYG3 113 aa9.76□□□□□ -0.85
SMPD3-205ENST00000563455 C11orf86A6NJI1 115 aa9.76□□□□□ -0.85
SMPD3-205ENST00000563455 M0R143 59 aa9.76□□□□□ -0.85
SMPD3-205ENST00000563455 CASC10Q5T4H9 136 aa9.76□□□□□ -0.85
SMPD3-205ENST00000563455 BOD1L2Q8IYS8 172 aa9.76□□□□□ -0.85
SMPD3-205ENST00000563455 ATP6V0E2Q8NHE4 81 aa9.76□□□□□ -0.85
SMPD3-205ENST00000563455 PHLDA1Q8WV24 401 aaPredicted RBP9.76□□□□□ -0.85
SMPD3-205ENST00000563455 SPATA25Q9BR10 227 aa9.76□□□□□ -0.85
SMPD3-205ENST00000563455 MRPL23Q16540 153 aaKnown RBP9.75□□□□□ -0.85
SMPD3-205ENST00000563455 MAJINQ3KP22 176 aa9.75□□□□□ -0.85
SMPD3-205ENST00000563455 AMMECR1LQ6DCA0 310 aa9.75□□□□□ -0.85
SMPD3-205ENST00000563455 C14orf144Q96I85 54 aa9.75□□□□□ -0.85
SMPD3-205ENST00000563455 KMT2CQ8NEZ4 4911 aaKnown RBP9.75□□□□□ -0.85
SMPD3-205ENST00000563455 E9PLD3 99 aa9.74□□□□□ -0.85
SMPD3-205ENST00000563455 GYPEP15421 78 aa9.74□□□□□ -0.85
SMPD3-205ENST00000563455 STPG4Q8N801 248 aa9.74□□□□□ -0.85
SMPD3-205ENST00000563455 OR5A1Q8NGJ0 315 aa9.74□□□□□ -0.85
SMPD3-205ENST00000563455 NACAE9PAV3 2078 aa9.74□□□□□ -0.85
SMPD3-205ENST00000563455 IGHV3-38A0A0C4DH36 116 aa9.73□□□□□ -0.85
SMPD3-205ENST00000563455 TINCRA0A1B0GVN0 87 aa9.73□□□□□ -0.85
SMPD3-205ENST00000563455 CCL25O15444 150 aa9.73□□□□□ -0.85
SMPD3-205ENST00000563455 FGF6P10767 208 aa9.73□□□□□ -0.85
SMPD3-205ENST00000563455 FAM19A3Q7Z5A8 133 aa9.73□□□□□ -0.85
SMPD3-205ENST00000563455 TM2D3Q9BRN9 247 aa9.73□□□□□ -0.85
SMPD3-205ENST00000563455 HIGD1BQ9P298 99 aa9.73□□□□□ -0.85
SMPD3-205ENST00000563455 Q9UF83 564 aa9.73□□□□□ -0.85
SMPD3-205ENST00000563455 IGLV4-69A0A075B6H9 119 aa9.72□□□□□ -0.85
SMPD3-205ENST00000563455 TIRAPP58753 221 aa9.72□□□□□ -0.85
SMPD3-205ENST00000563455 ANKRD39Q53RE8 183 aa9.72□□□□□ -0.85
SMPD3-205ENST00000563455 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.71□□□□□ -0.86
SMPD3-205ENST00000563455 A0A1B0GUV1 79 aa9.71□□□□□ -0.86
SMPD3-205ENST00000563455 IGKV2-29A2NJV5 120 aaPredicted RBP9.71□□□□□ -0.86
SMPD3-205ENST00000563455 H3BRM9 83 aa9.71□□□□□ -0.86
SMPD3-205ENST00000563455 NMUP48645 174 aa9.71□□□□□ -0.86
SMPD3-205ENST00000563455 HERVK_113P63121 156 aa9.71□□□□□ -0.86
SMPD3-205ENST00000563455 NTM-AS1Q6ZSK4 140 aa9.71□□□□□ -0.86
SMPD3-205ENST00000563455 CHAC1Q9BUX1 264 aa9.71□□□□□ -0.86
SMPD3-205ENST00000563455 ICOSQ9Y6W8 199 aa9.71□□□□□ -0.86
SMPD3-205ENST00000563455 F5H768 121 aa9.7□□□□□ -0.86
SMPD3-205ENST00000563455 PLEKHB2Q96CS7 222 aa9.7□□□□□ -0.86
SMPD3-205ENST00000563455 GEMIN7Q9H840 131 aaKnown RBP9.7□□□□□ -0.86
SMPD3-205ENST00000563455 CDC42SE2Q9NRR3 84 aa9.7□□□□□ -0.86
SMPD3-205ENST00000563455 TMEM170BQ5T4T1 132 aa9.69□□□□□ -0.86
SMPD3-205ENST00000563455 STAB2Q8WWQ8 2551 aa9.68□□□□□ -0.86
SMPD3-205ENST00000563455 UBE2D1P51668 147 aa9.68□□□□□ -0.86
SMPD3-205ENST00000563455 CTAG1AP78358 180 aa9.68□□□□□ -0.86
SMPD3-205ENST00000563455 CHCHD5Q9BSY4 110 aa9.68□□□□□ -0.86
SMPD3-205ENST00000563455 IGLV5-45A0A087WSX0 123 aa9.67□□□□□ -0.86
SMPD3-205ENST00000563455 LOC100131303A0A0U1RQF7 123 aa9.67□□□□□ -0.86
SMPD3-205ENST00000563455 DEFB4AO15263 64 aa9.67□□□□□ -0.86
SMPD3-205ENST00000563455 TAL2Q16559 108 aa9.67□□□□□ -0.86
SMPD3-205ENST00000563455 C12orf74Q32Q52 190 aa9.67□□□□□ -0.86
SMPD3-205ENST00000563455 C11orf45Q8TAV5 145 aa9.67□□□□□ -0.86
SMPD3-205ENST00000563455 DEFB104AQ8WTQ1 72 aa9.67□□□□□ -0.86
SMPD3-205ENST00000563455 VSIG2Q96IQ7 327 aa9.67□□□□□ -0.86
SMPD3-205ENST00000563455 CELA1Q9UNI1 258 aa9.67□□□□□ -0.86
SMPD3-205ENST00000563455 MYMXA0A1B0GTQ4 84 aa9.66□□□□□ -0.86
SMPD3-205ENST00000563455 TMEM223A0PJW6 202 aa9.66□□□□□ -0.86
SMPD3-205ENST00000563455 LEPROTO15243 131 aa9.66□□□□□ -0.86
SMPD3-205ENST00000563455 Q6ZUT4 128 aa9.66□□□□□ -0.86
SMPD3-205ENST00000563455 FAM104AQ969W3 186 aa9.66□□□□□ -0.86
SMPD3-205ENST00000563455 OPRPNQ99935 248 aaPredicted RBP9.66□□□□□ -0.86
SMPD3-205ENST00000563455 A0A0J9YXV3 536 aa9.65□□□□□ -0.86
SMPD3-205ENST00000563455 LCE6AA0A183 80 aa9.65□□□□□ -0.86
SMPD3-205ENST00000563455 ZNF22P17026 224 aaPredicted RBP9.65□□□□□ -0.86
SMPD3-205ENST00000563455 HSD52Q0P140 79 aa9.65□□□□□ -0.86
SMPD3-205ENST00000563455 COL5A1-AS1Q5SY13 56 aa9.65□□□□□ -0.86
SMPD3-205ENST00000563455 LELP1Q5T871 98 aa9.65□□□□□ -0.86
SMPD3-205ENST00000563455 RYR3Q15413 4870 aa9.65□□□□□ -0.87
SMPD3-205ENST00000563455 TRAV8-6A0A0B4J262 113 aa9.64□□□□□ -0.87
SMPD3-205ENST00000563455 LGALS3P17931 250 aaKnown RBP9.64□□□□□ -0.87
SMPD3-205ENST00000563455 CEMP1Q6PRD7 247 aaPredicted RBP9.64□□□□□ -0.87
SMPD3-205ENST00000563455 IGKV2D-26A0A0A0MRZ7 120 aa9.63□□□□□ -0.87
SMPD3-205ENST00000563455 IGHV1-58A0A0C4DH39 117 aa9.63□□□□□ -0.87
SMPD3-205ENST00000563455 J3QQQ9 107 aa9.63□□□□□ -0.87
SMPD3-205ENST00000563455 ZFAND6Q6FIF0 208 aa9.63□□□□□ -0.87
SMPD3-205ENST00000563455 PCP2Q8IVA1 136 aa9.63□□□□□ -0.87
SMPD3-205ENST00000563455 SNHG12Q9BXW3 62 aa9.63□□□□□ -0.87
SMPD3-205ENST00000563455 A0A0J9YY99 117 aa9.62□□□□□ -0.87
SMPD3-205ENST00000563455 SFTA2Q6UW10 78 aa9.62□□□□□ -0.87
SMPD3-205ENST00000563455 C2orf91Q6ZV80 131 aa9.62□□□□□ -0.87
SMPD3-205ENST00000563455 LINC01561Q8N1V8 128 aa9.62□□□□□ -0.87
SMPD3-205ENST00000563455 LINC00469Q8N7U9 141 aa9.62□□□□□ -0.87
SMPD3-205ENST00000563455 C15orf53Q8NAA6 179 aa9.62□□□□□ -0.87
SMPD3-205ENST00000563455 TRAV10A0A0B4J240 114 aa9.61□□□□□ -0.87
SMPD3-205ENST00000563455 A0A0J9YWU9 116 aa9.61□□□□□ -0.87
SMPD3-205ENST00000563455 TMEM262E9PQX1 116 aa9.61□□□□□ -0.87
SMPD3-205ENST00000563455 HTN3P15516 51 aa9.61□□□□□ -0.87
SMPD3-205ENST00000563455 GAGE6Q13070 117 aa9.61□□□□□ -0.87
SMPD3-205ENST00000563455 LINC00242Q5T6M2 205 aa9.61□□□□□ -0.87
SMPD3-205ENST00000563455 A6NDN8 102 aa9.6□□□□□ -0.87
SMPD3-205ENST00000563455 ZNF815PA8K554 130 aa9.6□□□□□ -0.87
SMPD3-205ENST00000563455 SS18Q15532 418 aa9.6□□□□□ -0.87
SMPD3-205ENST00000563455 SCGB1D4Q6XE38 83 aa9.6□□□□□ -0.87
SMPD3-205ENST00000563455 DEFB131BA0A096LNP1 70 aa9.59□□□□□ -0.87
SMPD3-205ENST00000563455 A0A096LPF7 62 aa9.59□□□□□ -0.87
SMPD3-205ENST00000563455 GCSHP23434 173 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms