RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 RMI2Q96E14 147 aa10.44□□□□□ -0.74
USB1-208ENST00000563207 ALKBH7Q9BT30 221 aaPredicted RBP10.44□□□□□ -0.74
USB1-208ENST00000563207 TM2D2Q9BX73 214 aa10.44□□□□□ -0.74
USB1-208ENST00000563207 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.43□□□□□ -0.74
USB1-208ENST00000563207 LOC389332A0A1B0GUA5 103 aa10.43□□□□□ -0.74
USB1-208ENST00000563207 IGKV2-29A2NJV5 120 aaPredicted RBP10.43□□□□□ -0.74
USB1-208ENST00000563207 CRPP02741 224 aa10.43□□□□□ -0.74
USB1-208ENST00000563207 FGF6P10767 208 aa10.43□□□□□ -0.74
USB1-208ENST00000563207 TMEM101Q96IK0 257 aa10.43□□□□□ -0.74
USB1-208ENST00000563207 PRR34Q9NV39 138 aa10.43□□□□□ -0.74
USB1-208ENST00000563207 CSDC2Q9Y534 153 aaKnown RBP10.43□□□□□ -0.74
USB1-208ENST00000563207 EREGO14944 169 aa10.42□□□□□ -0.74
USB1-208ENST00000563207 S100A1P23297 94 aa10.42□□□□□ -0.74
USB1-208ENST00000563207 G0S2P27469 103 aa10.42□□□□□ -0.74
USB1-208ENST00000563207 MIAQ16674 131 aa10.42□□□□□ -0.74
USB1-208ENST00000563207 ORMDL2Q53FV1 153 aa10.42□□□□□ -0.74
USB1-208ENST00000563207 C20orf203Q8NBC4 194 aa10.42□□□□□ -0.74
USB1-208ENST00000563207 UBE2WQ96B02 151 aa10.42□□□□□ -0.74
USB1-208ENST00000563207 TIMM21Q9BVV7 248 aa10.42□□□□□ -0.74
USB1-208ENST00000563207 IGLV4-60A0A075B6I1 120 aa10.41□□□□□ -0.74
USB1-208ENST00000563207 RNASEKQ6P5S7 137 aaKnown RBP10.41□□□□□ -0.74
USB1-208ENST00000563207 Q9HAA7 133 aa10.41□□□□□ -0.74
USB1-208ENST00000563207 HERC1Q15751 4861 aa10.4□□□□□ -0.74
USB1-208ENST00000563207 TRAV8-4A0A0B4J246 113 aa10.4□□□□□ -0.74
USB1-208ENST00000563207 LRCOL1A6NCL2 159 aa10.4□□□□□ -0.74
USB1-208ENST00000563207 EPM2AB3EWF7 344 aa10.4□□□□□ -0.74
USB1-208ENST00000563207 SMR3BP02814 79 aaPredicted RBP10.4□□□□□ -0.74
USB1-208ENST00000563207 IFI27P40305 119 aaPredicted RBP10.4□□□□□ -0.74
USB1-208ENST00000563207 DGAT2L7PQ6IED9 249 aa10.4□□□□□ -0.74
USB1-208ENST00000563207 ENHOQ6UWT2 76 aa10.4□□□□□ -0.74
USB1-208ENST00000563207 LINC00269Q8N2A0 174 aa10.4□□□□□ -0.74
USB1-208ENST00000563207 OR5A1Q8NGJ0 315 aa10.4□□□□□ -0.74
USB1-208ENST00000563207 PRSS3P2Q8NHM4 247 aa10.4□□□□□ -0.74
USB1-208ENST00000563207 PSCAO43653 123 aa10.39□□□□□ -0.75
USB1-208ENST00000563207 REG3AQ06141 175 aa10.39□□□□□ -0.75
USB1-208ENST00000563207 CDPF1Q6NVV7 123 aa10.39□□□□□ -0.75
USB1-208ENST00000563207 LINC01546A6NGU7 62 aa10.38□□□□□ -0.75
USB1-208ENST00000563207 COLCA2A8K830 154 aa10.38□□□□□ -0.75
USB1-208ENST00000563207 C1orf43Q9BWL3 253 aa10.38□□□□□ -0.75
USB1-208ENST00000563207 SPANXA1Q9NS26 97 aa10.38□□□□□ -0.75
USB1-208ENST00000563207 UBE2D4Q9Y2X8 147 aa10.38□□□□□ -0.75
USB1-208ENST00000563207 LINC01549A6NIU2 74 aa10.37□□□□□ -0.75
USB1-208ENST00000563207 GCSHP23434 173 aa10.37□□□□□ -0.75
USB1-208ENST00000563207 WFDC2Q14508 124 aa10.37□□□□□ -0.75
USB1-208ENST00000563207 ZNF664Q8N3J9 261 aa10.37□□□□□ -0.75
USB1-208ENST00000563207 CDC42SE2Q9NRR3 84 aa10.37□□□□□ -0.75
USB1-208ENST00000563207 DNAH8Q96JB1 4490 aa10.36□□□□□ -0.75
USB1-208ENST00000563207 VPS13BQ7Z7G8 4022 aa10.36□□□□□ -0.75
USB1-208ENST00000563207 IGKV2D-24A0A075B6R9 120 aa10.36□□□□□ -0.75
USB1-208ENST00000563207 Q5VSD8 79 aa10.36□□□□□ -0.75
USB1-208ENST00000563207 CYSLTR1Q9Y271 337 aa10.36□□□□□ -0.75
USB1-208ENST00000563207 PYGO1Q9Y3Y4 419 aa10.36□□□□□ -0.75
USB1-208ENST00000563207 CCL25O15444 150 aa10.35□□□□□ -0.75
USB1-208ENST00000563207 NPSP0C0P6 89 aa10.35□□□□□ -0.75
USB1-208ENST00000563207 RAB5BP61020 215 aa10.35□□□□□ -0.75
USB1-208ENST00000563207 RPL39P62891 51 aaKnown RBP10.35□□□□□ -0.75
USB1-208ENST00000563207 MRPS36P82909 103 aaKnown RBP10.35□□□□□ -0.75
USB1-208ENST00000563207 FA2HQ7L5A8 372 aa10.35□□□□□ -0.75
USB1-208ENST00000563207 C18orf32Q8TCD1 76 aa10.35□□□□□ -0.75
USB1-208ENST00000563207 FAM30AQ9NZY2 134 aa10.35□□□□□ -0.75
USB1-208ENST00000563207 ATP6V1G1O75348 118 aa10.34□□□□□ -0.75
USB1-208ENST00000563207 INAFM2P0DMQ5 153 aa10.34□□□□□ -0.75
USB1-208ENST00000563207 CLPSL2Q6UWE3 100 aa10.34□□□□□ -0.75
USB1-208ENST00000563207 C2orf66Q6UXQ4 117 aa10.34□□□□□ -0.75
USB1-208ENST00000563207 SRRM2Q9UQ35 2752 aaKnown RBP10.34□□□□□ -0.75
USB1-208ENST00000563207 IGLV5-52A0A0A0MRZ9 124 aa10.33□□□□□ -0.76
USB1-208ENST00000563207 SCO1O75880 301 aa10.33□□□□□ -0.76
USB1-208ENST00000563207 TRGC2P03986 189 aa10.33□□□□□ -0.76
USB1-208ENST00000563207 AP5S1Q9NUS5 200 aa10.33□□□□□ -0.76
USB1-208ENST00000563207 LINC00614P0C842 121 aa10.32□□□□□ -0.76
USB1-208ENST00000563207 Q8N814 137 aa10.32□□□□□ -0.76
USB1-208ENST00000563207 LECT2O14960 151 aa10.31□□□□□ -0.76
USB1-208ENST00000563207 SS18Q15532 418 aa10.31□□□□□ -0.76
USB1-208ENST00000563207 PAPPA-AS1Q5QFB9 102 aa10.31□□□□□ -0.76
USB1-208ENST00000563207 TOMM6Q96B49 74 aa10.31□□□□□ -0.76
USB1-208ENST00000563207 MYCBP2O75592 4640 aa10.3□□□□□ -0.76
USB1-208ENST00000563207 LINC00959A0A1B0GUT2 108 aa10.3□□□□□ -0.76
USB1-208ENST00000563207 C1orf196B1AJZ1 125 aa10.3□□□□□ -0.76
USB1-208ENST00000563207 KRTAP26-1Q6PEX3 210 aa10.3□□□□□ -0.76
USB1-208ENST00000563207 IGLV10-54A0A075B6I4 117 aa10.29□□□□□ -0.76
USB1-208ENST00000563207 IGKV3OR2-268A0A0C4DH90 116 aa10.29□□□□□ -0.76
USB1-208ENST00000563207 Q6ZUT4 128 aa10.29□□□□□ -0.76
USB1-208ENST00000563207 CHCHD1Q96BP2 118 aaKnown RBP10.29□□□□□ -0.76
USB1-208ENST00000563207 TMEM141Q96I45 108 aa10.29□□□□□ -0.76
USB1-208ENST00000563207 TIMM17AQ99595 171 aa10.29□□□□□ -0.76
USB1-208ENST00000563207 IGLV4-3A0A075B6K6 122 aa10.28□□□□□ -0.76
USB1-208ENST00000563207 IGIPA6NJ69 53 aa10.28□□□□□ -0.76
USB1-208ENST00000563207 LINC01620Q4KN68 170 aa10.28□□□□□ -0.76
USB1-208ENST00000563207 C14orf177Q52M58 125 aa10.28□□□□□ -0.76
USB1-208ENST00000563207 Q6ZN92 141 aa10.28□□□□□ -0.76
USB1-208ENST00000563207 ERASQ7Z444 233 aa10.28□□□□□ -0.76
USB1-208ENST00000563207 CHCHD10Q8WYQ3 142 aaPredicted RBP10.28□□□□□ -0.76
USB1-208ENST00000563207 FAM104AQ969W3 186 aa10.27□□□□□ -0.77
USB1-208ENST00000563207 URB1-AS1Q96HZ7 61 aa10.27□□□□□ -0.77
USB1-208ENST00000563207 SCGB3A1Q96QR1 104 aa10.27□□□□□ -0.77
USB1-208ENST00000563207 CD164L2Q6UWJ8 174 aa10.26□□□□□ -0.77
USB1-208ENST00000563207 TEX43Q6ZNM6 134 aa10.26□□□□□ -0.77
USB1-208ENST00000563207 BAGE3Q86Y29 109 aa10.26□□□□□ -0.77
USB1-208ENST00000563207 NTN5Q8WTR8 489 aaPredicted RBP10.26□□□□□ -0.77
USB1-208ENST00000563207 BAALCQ8WXS3 180 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 190.8 ms