RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 TRBV27A0A0K0K1C4 114 aa10.33□□□□□ -0.76
GTF3C1-203ENST00000562609 RS1O15537 224 aa10.33□□□□□ -0.76
GTF3C1-203ENST00000562609 Q5XG85 94 aa10.33□□□□□ -0.76
GTF3C1-203ENST00000562609 NDUFA12Q9UI09 145 aa10.33□□□□□ -0.76
GTF3C1-203ENST00000562609 RNF152Q8N8N0 203 aa10.33□□□□□ -0.76
GTF3C1-203ENST00000562609 C20orf173Q96LM9 149 aa10.33□□□□□ -0.76
GTF3C1-203ENST00000562609 MUC4Q99102 2169 aa10.33□□□□□ -0.76
GTF3C1-203ENST00000562609 FAM19A4Q96LR4 140 aa10.32□□□□□ -0.76
GTF3C1-203ENST00000562609 LENEPQ9Y5L5 61 aa10.32□□□□□ -0.76
GTF3C1-203ENST00000562609 SETD2Q9BYW2 2564 aaPredicted RBP10.32□□□□□ -0.76
GTF3C1-203ENST00000562609 MED14OSP0DP75 135 aa10.32□□□□□ -0.76
GTF3C1-203ENST00000562609 DAND5Q8N907 189 aa10.32□□□□□ -0.76
GTF3C1-203ENST00000562609 NF1P21359 2839 aa10.31□□□□□ -0.76
GTF3C1-203ENST00000562609 A8MZ25 164 aa10.31□□□□□ -0.76
GTF3C1-203ENST00000562609 B4DSR2 109 aa10.31□□□□□ -0.76
GTF3C1-203ENST00000562609 TIRAPP58753 221 aa10.31□□□□□ -0.76
GTF3C1-203ENST00000562609 RPL18AQ02543 176 aaKnown RBP10.31□□□□□ -0.76
GTF3C1-203ENST00000562609 FAM74A4Q5TZK3 123 aa10.31□□□□□ -0.76
GTF3C1-203ENST00000562609 UNQ9165/PRO28630Q6UXU0 137 aa10.3□□□□□ -0.76
GTF3C1-203ENST00000562609 LINC00477Q96M19 166 aa10.3□□□□□ -0.76
GTF3C1-203ENST00000562609 IGLV4-3A0A075B6K6 122 aa10.3□□□□□ -0.76
GTF3C1-203ENST00000562609 SORL1Q92673 2214 aa10.3□□□□□ -0.76
GTF3C1-203ENST00000562609 IGKV3-7A0A075B6H7 116 aa10.29□□□□□ -0.76
GTF3C1-203ENST00000562609 ACANP16112 2415 aa10.29□□□□□ -0.76
GTF3C1-203ENST00000562609 IGHV4-59P01825 116 aa10.29□□□□□ -0.76
GTF3C1-203ENST00000562609 BAALC-AS2P0C853 105 aa10.29□□□□□ -0.76
GTF3C1-203ENST00000562609 MRAPQ8TCY5 172 aa10.29□□□□□ -0.76
GTF3C1-203ENST00000562609 ITPR3Q14573 2671 aa10.29□□□□□ -0.76
GTF3C1-203ENST00000562609 NXPH4O95158 308 aa10.29□□□□□ -0.76
GTF3C1-203ENST00000562609 RPL11P62913 178 aaKnown RBP10.29□□□□□ -0.76
GTF3C1-203ENST00000562609 NACAE9PAV3 2078 aa10.28□□□□□ -0.76
GTF3C1-203ENST00000562609 A6NDX4 124 aa10.28□□□□□ -0.76
GTF3C1-203ENST00000562609 C10orf99Q6UWK7 81 aa10.28□□□□□ -0.76
GTF3C1-203ENST00000562609 SERP2Q8N6R1 65 aa10.28□□□□□ -0.76
GTF3C1-203ENST00000562609 C20orf203Q8NBC4 194 aa10.28□□□□□ -0.76
GTF3C1-203ENST00000562609 UPK3BQ9BT76 320 aa10.28□□□□□ -0.76
GTF3C1-203ENST00000562609 HELZ2Q9BYK8 2649 aaKnown RBP10.28□□□□□ -0.76
GTF3C1-203ENST00000562609 IGHV1-58A0A0C4DH39 117 aa10.28□□□□□ -0.76
GTF3C1-203ENST00000562609 COX7A2LO14548 114 aa10.28□□□□□ -0.76
GTF3C1-203ENST00000562609 DEFB112Q30KQ8 113 aa10.28□□□□□ -0.76
GTF3C1-203ENST00000562609 C19orf54Q5BKX5 351 aa10.28□□□□□ -0.76
GTF3C1-203ENST00000562609 PYGO1Q9Y3Y4 419 aa10.27□□□□□ -0.77
GTF3C1-203ENST00000562609 FLNAP21333 2647 aaKnown RBP10.27□□□□□ -0.77
GTF3C1-203ENST00000562609 TRBV6-5A0A0K0K1A5 114 aa10.27□□□□□ -0.77
GTF3C1-203ENST00000562609 F6UB75 175 aa10.27□□□□□ -0.77
GTF3C1-203ENST00000562609 C9orf139Q6ZV77 190 aa10.27□□□□□ -0.77
GTF3C1-203ENST00000562609 ITPR2Q14571 2701 aa10.27□□□□□ -0.77
GTF3C1-203ENST00000562609 IGHG2P01859 326 aa10.26□□□□□ -0.77
GTF3C1-203ENST00000562609 IGKV3D-7A0A0C4DH55 119 aa10.26□□□□□ -0.77
GTF3C1-203ENST00000562609 HIST2H2BCQ6DN03 193 aa10.26□□□□□ -0.77
GTF3C1-203ENST00000562609 EDN2P20800 178 aa10.25□□□□□ -0.77
GTF3C1-203ENST00000562609 RNASE13Q5GAN3 156 aaKnown RBP10.25□□□□□ -0.77
GTF3C1-203ENST00000562609 C22orf24Q9Y442 160 aa10.25□□□□□ -0.77
GTF3C1-203ENST00000562609 A0A087WVE0 104 aa10.25□□□□□ -0.77
GTF3C1-203ENST00000562609 VSIG2Q96IQ7 327 aa10.25□□□□□ -0.77
GTF3C1-203ENST00000562609 INAFM2P0DMQ5 153 aa10.25□□□□□ -0.77
GTF3C1-203ENST00000562609 CD28P10747 220 aa10.25□□□□□ -0.77
GTF3C1-203ENST00000562609 KLK9Q2XQG4 91 aa10.25□□□□□ -0.77
GTF3C1-203ENST00000562609 LINC01356Q8N9X3 169 aa10.25□□□□□ -0.77
GTF3C1-203ENST00000562609 KLK9Q9UKQ9 250 aa10.25□□□□□ -0.77
GTF3C1-203ENST00000562609 A0A096LNT2 108 aa10.24□□□□□ -0.77
GTF3C1-203ENST00000562609 MTORP42345 2549 aa10.24□□□□□ -0.77
GTF3C1-203ENST00000562609 FAM223BA6NKX1 122 aa10.24□□□□□ -0.77
GTF3C1-203ENST00000562609 MRPS36P82909 103 aaKnown RBP10.24□□□□□ -0.77
GTF3C1-203ENST00000562609 BEAN1Q3B7T3 259 aa10.24□□□□□ -0.77
GTF3C1-203ENST00000562609 FAM223AQ8IWN6 122 aa10.24□□□□□ -0.77
GTF3C1-203ENST00000562609 Q8N2B8 174 aa10.24□□□□□ -0.77
GTF3C1-203ENST00000562609 CR1P17927 2039 aa10.24□□□□□ -0.77
GTF3C1-203ENST00000562609 M0QY20 66 aa10.23□□□□□ -0.77
GTF3C1-203ENST00000562609 U3KQE9 123 aa10.23□□□□□ -0.77
GTF3C1-203ENST00000562609 SYNJ2BPP57105 145 aa10.23□□□□□ -0.77
GTF3C1-203ENST00000562609 DSCR9P59020 149 aa10.22□□□□□ -0.77
GTF3C1-203ENST00000562609 A0A0U1RRA0 63 aa10.21□□□□□ -0.77
GTF3C1-203ENST00000562609 USP17L23D6RBM5 183 aa10.21□□□□□ -0.78
GTF3C1-203ENST00000562609 FAM218AQ96MZ4 157 aa10.21□□□□□ -0.78
GTF3C1-203ENST00000562609 Q9HAA7 133 aa10.2□□□□□ -0.78
GTF3C1-203ENST00000562609 DNAL4O96015 105 aa10.2□□□□□ -0.78
GTF3C1-203ENST00000562609 FAM104AQ969W3 186 aa10.2□□□□□ -0.78
GTF3C1-203ENST00000562609 TIMM17BO60830 172 aa10.2□□□□□ -0.78
GTF3C1-203ENST00000562609 HIST2H2BDQ6DRA6 164 aa10.2□□□□□ -0.78
GTF3C1-203ENST00000562609 LINC01561Q8N1V8 128 aa10.2□□□□□ -0.78
GTF3C1-203ENST00000562609 LINC00308Q8TCZ7 52 aa10.2□□□□□ -0.78
GTF3C1-203ENST00000562609 FHL2Q14192 279 aa10.19□□□□□ -0.78
GTF3C1-203ENST00000562609 FAM222AQ5U5X8 452 aa10.19□□□□□ -0.78
GTF3C1-203ENST00000562609 APRG1Q8IVJ8 170 aa10.19□□□□□ -0.78
GTF3C1-203ENST00000562609 WNK1Q9H4A3 2382 aa10.19□□□□□ -0.78
GTF3C1-203ENST00000562609 IGLV1-40P01703 118 aa10.19□□□□□ -0.78
GTF3C1-203ENST00000562609 NOTCH2Q04721 2471 aa10.19□□□□□ -0.78
GTF3C1-203ENST00000562609 IGHV4-31P0DP07 118 aa10.18□□□□□ -0.78
GTF3C1-203ENST00000562609 Q96MF0 132 aa10.18□□□□□ -0.78
GTF3C1-203ENST00000562609 NDUFA4O00483 81 aa10.18□□□□□ -0.78
GTF3C1-203ENST00000562609 MALP21145 153 aa10.18□□□□□ -0.78
GTF3C1-203ENST00000562609 PFN2P35080 140 aa10.18□□□□□ -0.78
GTF3C1-203ENST00000562609 CIRBPQ14011 172 aaKnown RBP10.18□□□□□ -0.78
GTF3C1-203ENST00000562609 PRIMA1Q86XR5 153 aa10.18□□□□□ -0.78
GTF3C1-203ENST00000562609 ZNF625Q96I27 306 aaPredicted RBP10.18□□□□□ -0.78
GTF3C1-203ENST00000562609 USMG5Q96IX5 58 aa10.18□□□□□ -0.78
GTF3C1-203ENST00000562609 J3QLI3 93 aa10.17□□□□□ -0.78
GTF3C1-203ENST00000562609 DEFB113Q30KQ7 82 aa10.17□□□□□ -0.78
GTF3C1-203ENST00000562609 Q6JHZ5 121 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 1757.6 ms