RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 TMEM191AQ9H0A3 160 aa-0.62□□□□□ -2.51
DENND4A-205ENST00000562540 HYDINQ4G0P3 5121 aa-0.63□□□□□ -2.51
DENND4A-205ENST00000562540 HIVEP1P15822 2718 aa-0.63□□□□□ -2.51
DENND4A-205ENST00000562540 DOCK2Q92608 1830 aa-0.63□□□□□ -2.51
DENND4A-205ENST00000562540 RBM3P98179 157 aaKnown RBP-0.63□□□□□ -2.51
DENND4A-205ENST00000562540 SMIM21Q3B7S5 101 aa-0.63□□□□□ -2.51
DENND4A-205ENST00000562540 TMEM170BQ5T4T1 132 aa-0.63□□□□□ -2.51
DENND4A-205ENST00000562540 AGPAT4-IT1Q9H0P7 198 aa-0.63□□□□□ -2.51
DENND4A-205ENST00000562540 CCDC167Q9P0B6 97 aa-0.63□□□□□ -2.51
DENND4A-205ENST00000562540 COL6A3P12111 3177 aa-0.63□□□□□ -2.51
DENND4A-205ENST00000562540 NBEAL1Q6ZS30 2694 aa-0.63□□□□□ -2.51
DENND4A-205ENST00000562540 LRP6O75581 1613 aa-0.64□□□□□ -2.51
DENND4A-205ENST00000562540 DOCK1Q14185 1865 aa-0.64□□□□□ -2.51
DENND4A-205ENST00000562540 TRBV6-1A0A0K0K1D8 114 aa-0.64□□□□□ -2.51
DENND4A-205ENST00000562540 HIST1H1DP16402 221 aaKnown RBP-0.64□□□□□ -2.51
DENND4A-205ENST00000562540 TTC9CQ8N5M4 171 aa-0.64□□□□□ -2.51
DENND4A-205ENST00000562540 ZNF236Q9UL36 1845 aa-0.64□□□□□ -2.51
DENND4A-205ENST00000562540 PXDNQ92626 1479 aa-0.65□□□□□ -2.51
DENND4A-205ENST00000562540 PATJQ8NI35 1801 aa-0.65□□□□□ -2.51
DENND4A-205ENST00000562540 SPAARA0A1B0GVQ0 90 aa-0.65□□□□□ -2.51
DENND4A-205ENST00000562540 K7EQZ3 153 aa-0.65□□□□□ -2.51
DENND4A-205ENST00000562540 PIGYQ3MUY2 71 aa-0.65□□□□□ -2.51
DENND4A-205ENST00000562540 LENEPQ9Y5L5 61 aa-0.65□□□□□ -2.51
DENND4A-205ENST00000562540 V9GYH0 126 aa-0.65□□□□□ -2.51
DENND4A-205ENST00000562540 ABCA13Q86UQ4 5058 aa-0.65□□□□□ -2.51
DENND4A-205ENST00000562540 MRC1P22897 1456 aa-0.66□□□□□ -2.51
DENND4A-205ENST00000562540 BCL9LQ86UU0 1499 aa-0.66□□□□□ -2.51
DENND4A-205ENST00000562540 LRRC37A2A6NM11 1700 aa-0.66□□□□□ -2.51
DENND4A-205ENST00000562540 I3L2K1 104 aa-0.66□□□□□ -2.52
DENND4A-205ENST00000562540 COPS9Q8WXC6 57 aa-0.66□□□□□ -2.52
DENND4A-205ENST00000562540 MAP1AP78559 2803 aaPredicted RBP-0.66□□□□□ -2.52
DENND4A-205ENST00000562540 LAMC1P11047 1609 aa-0.67□□□□□ -2.52
DENND4A-205ENST00000562540 FAT1Q14517 4588 aa-0.67□□□□□ -2.52
DENND4A-205ENST00000562540 COX17Q14061 63 aa-0.67□□□□□ -2.52
DENND4A-205ENST00000562540 KRTAP20-2Q3LI61 65 aa-0.67□□□□□ -2.52
DENND4A-205ENST00000562540 Q6JHZ5 121 aa-0.67□□□□□ -2.52
DENND4A-205ENST00000562540 BAGE2Q86Y30 109 aa-0.67□□□□□ -2.52
DENND4A-205ENST00000562540 PDCD10Q9BUL8 212 aa-0.67□□□□□ -2.52
DENND4A-205ENST00000562540 HERC1Q15751 4861 aa-0.67□□□□□ -2.52
DENND4A-205ENST00000562540 SBF2Q86WG5 1849 aa-0.68□□□□□ -2.52
DENND4A-205ENST00000562540 C12orf73Q69YU5 71 aa-0.68□□□□□ -2.52
DENND4A-205ENST00000562540 PFDN5Q99471 154 aa-0.68□□□□□ -2.52
DENND4A-205ENST00000562540 TSC2P49815 1807 aa-0.68□□□□□ -2.52
DENND4A-205ENST00000562540 CEP152O94986 1710 aa-0.69□□□□□ -2.52
DENND4A-205ENST00000562540 ARAP2Q8WZ64 1704 aa-0.69□□□□□ -2.52
DENND4A-205ENST00000562540 PPIP5K1Q6PFW1 1433 aa-0.69□□□□□ -2.52
DENND4A-205ENST00000562540 TNFP01375 233 aa-0.69□□□□□ -2.52
DENND4A-205ENST00000562540 KRTAP19-8Q3LI54 63 aa-0.69□□□□□ -2.52
DENND4A-205ENST00000562540 AMELXQ99217 191 aa-0.69□□□□□ -2.52
DENND4A-205ENST00000562540 LOC730098B7Z3J9 87 aa-0.7□□□□□ -2.52
DENND4A-205ENST00000562540 F8VRH5 84 aa-0.7□□□□□ -2.52
DENND4A-205ENST00000562540 UQCR11O14957 56 aa-0.7□□□□□ -2.52
DENND4A-205ENST00000562540 APOC3P02656 99 aa-0.7□□□□□ -2.52
DENND4A-205ENST00000562540 COX6B1P14854 86 aa-0.7□□□□□ -2.52
DENND4A-205ENST00000562540 SPRR1BP22528 89 aa-0.7□□□□□ -2.52
DENND4A-205ENST00000562540 SPRR2BP35325 72 aa-0.7□□□□□ -2.52
DENND4A-205ENST00000562540 MT4P47944 62 aa-0.7□□□□□ -2.52
DENND4A-205ENST00000562540 ARPC4P59998 168 aa-0.7□□□□□ -2.52
DENND4A-205ENST00000562540 Q8N8P6 123 aa-0.7□□□□□ -2.52
DENND4A-205ENST00000562540 LINC00472Q9H8W2 130 aa-0.7□□□□□ -2.52
DENND4A-205ENST00000562540 SETD2Q9BYW2 2564 aaPredicted RBP-0.71□□□□□ -2.52
DENND4A-205ENST00000562540 TPPP2P59282 170 aa-0.71□□□□□ -2.52
DENND4A-205ENST00000562540 MYH7P12883 1935 aa-0.72□□□□□ -2.52
DENND4A-205ENST00000562540 LOC105371267A0A1B0GV96 52 aa-0.72□□□□□ -2.52
DENND4A-205ENST00000562540 KRTAP20-1Q3LI63 56 aa-0.72□□□□□ -2.52
DENND4A-205ENST00000562540 Q6AWC8 147 aa-0.72□□□□□ -2.52
DENND4A-205ENST00000562540 RERGLQ9H628 205 aa-0.72□□□□□ -2.52
DENND4A-205ENST00000562540 DYNLRB1Q9NP97 96 aa-0.72□□□□□ -2.52
DENND4A-205ENST00000562540 PAIP2BQ9ULR5 123 aaKnown RBP-0.72□□□□□ -2.52
DENND4A-205ENST00000562540 SERP1Q9Y6X1 66 aa-0.72□□□□□ -2.52
DENND4A-205ENST00000562540 TEP1Q99973 2627 aaKnown RBP-0.72□□□□□ -2.53
DENND4A-205ENST00000562540 LRP1BQ9NZR2 4599 aa-0.73□□□□□ -2.53
DENND4A-205ENST00000562540 PAPPAQ13219 1627 aa-0.73□□□□□ -2.53
DENND4A-205ENST00000562540 IGLC7A0M8Q6 106 aa-0.73□□□□□ -2.53
DENND4A-205ENST00000562540 LSM10Q969L4 123 aaKnown RBP-0.73□□□□□ -2.53
DENND4A-205ENST00000562540 MGST2Q99735 147 aa-0.73□□□□□ -2.53
DENND4A-205ENST00000562540 NDUFA4L2Q9NRX3 87 aa-0.73□□□□□ -2.53
DENND4A-205ENST00000562540 LINC01558Q9Y6Z2 57 aa-0.73□□□□□ -2.53
DENND4A-205ENST00000562540 PSME4Q14997 1843 aa-0.73□□□□□ -2.53
DENND4A-205ENST00000562540 WDR7Q9Y4E6 1490 aa-0.73□□□□□ -2.53
DENND4A-205ENST00000562540 STARD9Q9P2P6 4700 aa-0.74□□□□□ -2.53
DENND4A-205ENST00000562540 TRBV7-3A0A075B6L6 115 aa-0.74□□□□□ -2.53
DENND4A-205ENST00000562540 FAT3Q8TDW7 4589 aa-0.74□□□□□ -2.53
DENND4A-205ENST00000562540 KIF21AQ7Z4S6 1674 aa-0.75□□□□□ -2.53
DENND4A-205ENST00000562540 SONP18583 2426 aaKnown RBP-0.75□□□□□ -2.53
DENND4A-205ENST00000562540 SPINK4O60575 86 aa-0.75□□□□□ -2.53
DENND4A-205ENST00000562540 SELENOWP63302 87 aa-0.75□□□□□ -2.53
DENND4A-205ENST00000562540 PPP3R2Q96LZ3 170 aa-0.75□□□□□ -2.53
DENND4A-205ENST00000562540 SNRNP25Q9BV90 132 aaKnown RBP-0.75□□□□□ -2.53
DENND4A-205ENST00000562540 CFTRP13569 1480 aa-0.75□□□□□ -2.53
DENND4A-205ENST00000562540 GRIN2AQ12879 1464 aa-0.75□□□□□ -2.53
DENND4A-205ENST00000562540 TCHHQ07283 1943 aa-0.76□□□□□ -2.53
DENND4A-205ENST00000562540 TGP01266 2768 aa-0.76□□□□□ -2.53
DENND4A-205ENST00000562540 LOC285095A0A1B0GVY8 99 aa-0.76□□□□□ -2.53
DENND4A-205ENST00000562540 FAM25AB3EWG3 89 aa-0.76□□□□□ -2.53
DENND4A-205ENST00000562540 FAM25CB3EWG5 89 aa-0.76□□□□□ -2.53
DENND4A-205ENST00000562540 FAM25GB3EWG6 89 aa-0.76□□□□□ -2.53
DENND4A-205ENST00000562540 MEIG1Q5JSS6 88 aa-0.76□□□□□ -2.53
DENND4A-205ENST00000562540 TSLPQ969D9 159 aa-0.76□□□□□ -2.53
DENND4A-205ENST00000562540 NAA60Q9H7X0 242 aa-0.76□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms