RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 DPM3Q9P2X0 92 aa13.74□□□□□ -0.21
RAB40C-206ENST00000561781 ZFAND2AQ8N6M9 145 aa13.73□□□□□ -0.21
RAB40C-206ENST00000561781 GNRH2O43555 120 aa13.73□□□□□ -0.21
RAB40C-206ENST00000561781 FHL2Q14192 279 aa13.73□□□□□ -0.21
RAB40C-206ENST00000561781 EPM2AB3EWF7 344 aa13.72□□□□□ -0.21
RAB40C-206ENST00000561781 RNASE3P12724 160 aaKnown RBP13.72□□□□□ -0.21
RAB40C-206ENST00000561781 ZNF415Q09FC8 603 aa13.72□□□□□ -0.21
RAB40C-206ENST00000561781 TMEM86BQ8N661 226 aa13.72□□□□□ -0.21
RAB40C-206ENST00000561781 NACAE9PAV3 2078 aa13.72□□□□□ -0.21
RAB40C-206ENST00000561781 OTOGQ6ZRI0 2925 aa13.72□□□□□ -0.21
RAB40C-206ENST00000561781 TRAV12-2A0A075B6T6 113 aa13.72□□□□□ -0.21
RAB40C-206ENST00000561781 DNAL4O96015 105 aa13.72□□□□□ -0.21
RAB40C-206ENST00000561781 PRIMA1Q86XR5 153 aa13.72□□□□□ -0.21
RAB40C-206ENST00000561781 C16orf92Q96LL3 132 aa13.72□□□□□ -0.21
RAB40C-206ENST00000561781 LYNX1G3V0Z9 82 aa13.71□□□□□ -0.21
RAB40C-206ENST00000561781 LYNX1P0DP58 116 aa13.71□□□□□ -0.21
RAB40C-206ENST00000561781 C22orf24Q9Y442 160 aa13.71□□□□□ -0.21
RAB40C-206ENST00000561781 LINC01561Q8N1V8 128 aa13.71□□□□□ -0.22
RAB40C-206ENST00000561781 C20orf173Q96LM9 149 aa13.71□□□□□ -0.22
RAB40C-206ENST00000561781 CCL19Q99731 98 aa13.71□□□□□ -0.22
RAB40C-206ENST00000561781 PKIGQ9Y2B9 76 aa13.71□□□□□ -0.22
RAB40C-206ENST00000561781 SERP1Q9Y6X1 66 aa13.71□□□□□ -0.22
RAB40C-206ENST00000561781 ZANQ9Y493 2812 aa13.71□□□□□ -0.22
RAB40C-206ENST00000561781 IGKV3D-7A0A0C4DH55 119 aa13.7□□□□□ -0.22
RAB40C-206ENST00000561781 MUC4Q99102 2169 aa13.7□□□□□ -0.22
RAB40C-206ENST00000561781 MYO9AB2RTY4 2548 aa13.7□□□□□ -0.22
RAB40C-206ENST00000561781 IGLV4-3A0A075B6K6 122 aa13.7□□□□□ -0.22
RAB40C-206ENST00000561781 F5H697 171 aa13.7□□□□□ -0.22
RAB40C-206ENST00000561781 RS1O15537 224 aa13.7□□□□□ -0.22
RAB40C-206ENST00000561781 C11orf71Q6IPW1 123 aa13.7□□□□□ -0.22
RAB40C-206ENST00000561781 FAM236DA0A1B0GTK5 79 aa13.69□□□□□ -0.22
RAB40C-206ENST00000561781 FAM236CP0DP71 79 aa13.69□□□□□ -0.22
RAB40C-206ENST00000561781 RNASE4P34096 147 aaKnown RBP13.69□□□□□ -0.22
RAB40C-206ENST00000561781 MRPS36P82909 103 aaKnown RBP13.69□□□□□ -0.22
RAB40C-206ENST00000561781 VMO1Q7Z5L0 202 aa13.69□□□□□ -0.22
RAB40C-206ENST00000561781 C20orf203Q8NBC4 194 aa13.69□□□□□ -0.22
RAB40C-206ENST00000561781 V9GYY9 64 aa13.69□□□□□ -0.22
RAB40C-206ENST00000561781 CLEC19AQ6UXS0 136 aa13.68□□□□□ -0.22
RAB40C-206ENST00000561781 A0A087WVE0 104 aa13.68□□□□□ -0.22
RAB40C-206ENST00000561781 DEFB1P60022 68 aa13.68□□□□□ -0.22
RAB40C-206ENST00000561781 VSIG2Q96IQ7 327 aa13.68□□□□□ -0.22
RAB40C-206ENST00000561781 TMEM243Q9BU79 118 aa13.68□□□□□ -0.22
RAB40C-206ENST00000561781 A0A087WWL8 130 aa13.67□□□□□ -0.22
RAB40C-206ENST00000561781 IGHV7-81A0A0B4J1V7 117 aa13.66□□□□□ -0.22
RAB40C-206ENST00000561781 C9orf139Q6ZV77 190 aa13.66□□□□□ -0.22
RAB40C-206ENST00000561781 CCDC140Q96MF4 163 aa13.66□□□□□ -0.22
RAB40C-206ENST00000561781 MED13LQ71F56 2210 aa13.65□□□□□ -0.22
RAB40C-206ENST00000561781 CIRBPQ14011 172 aaKnown RBP13.65□□□□□ -0.22
RAB40C-206ENST00000561781 MAST4O15021 2626 aa13.64□□□□□ -0.23
RAB40C-206ENST00000561781 FAM223BA6NKX1 122 aa13.64□□□□□ -0.23
RAB40C-206ENST00000561781 COPS9Q8WXC6 57 aa13.64□□□□□ -0.23
RAB40C-206ENST00000561781 ECSCRQ19T08 205 aa13.64□□□□□ -0.23
RAB40C-206ENST00000561781 LY6G5BQ8NDX9 201 aa13.64□□□□□ -0.23
RAB40C-206ENST00000561781 UBE2D4Q9Y2X8 147 aa13.64□□□□□ -0.23
RAB40C-206ENST00000561781 ITPR3Q14573 2671 aa13.64□□□□□ -0.23
RAB40C-206ENST00000561781 IGHG2P01859 326 aa13.63□□□□□ -0.23
RAB40C-206ENST00000561781 RPL11P62913 178 aaKnown RBP13.63□□□□□ -0.23
RAB40C-206ENST00000561781 FAM223AQ8IWN6 122 aa13.62□□□□□ -0.23
RAB40C-206ENST00000561781 U3KQE9 123 aa13.62□□□□□ -0.23
RAB40C-206ENST00000561781 Q8N6K4 173 aa13.62□□□□□ -0.23
RAB40C-206ENST00000561781 RBMY1BA6NDE4 496 aaKnown RBP13.61□□□□□ -0.23
RAB40C-206ENST00000561781 RBMY1EA6NEQ0 496 aaKnown RBP13.61□□□□□ -0.23
RAB40C-206ENST00000561781 RBMY1DP0C7P1 496 aaKnown RBP13.61□□□□□ -0.23
RAB40C-206ENST00000561781 RBMY1A1P0DJD3 496 aaKnown RBP13.61□□□□□ -0.23
RAB40C-206ENST00000561781 RBMY1CP0DJD4 496 aa13.61□□□□□ -0.23
RAB40C-206ENST00000561781 RBMY1FQ15415 496 aaKnown RBP13.61□□□□□ -0.23
RAB40C-206ENST00000561781 Q8N2B8 174 aa13.61□□□□□ -0.23
RAB40C-206ENST00000561781 FAM110DQ8TAY7 271 aaPredicted RBP13.61□□□□□ -0.23
RAB40C-206ENST00000561781 LINC00308Q8TCZ7 52 aa13.61□□□□□ -0.23
RAB40C-206ENST00000561781 LINC00846Q9NV44 126 aa13.61□□□□□ -0.23
RAB40C-206ENST00000561781 FLNAP21333 2647 aaKnown RBP13.61□□□□□ -0.23
RAB40C-206ENST00000561781 CD28P10747 220 aa13.61□□□□□ -0.23
RAB40C-206ENST00000561781 ACANP16112 2415 aa13.61□□□□□ -0.23
RAB40C-206ENST00000561781 ODF3BA8MYP8 253 aa13.6□□□□□ -0.23
RAB40C-206ENST00000561781 FAM74A4Q5TZK3 123 aa13.6□□□□□ -0.23
RAB40C-206ENST00000561781 APRG1Q8IVJ8 170 aa13.6□□□□□ -0.23
RAB40C-206ENST00000561781 ZFHX3Q15911 3703 aa13.6□□□□□ -0.23
RAB40C-206ENST00000561781 SMIM26A0A096LP01 95 aa13.6□□□□□ -0.23
RAB40C-206ENST00000561781 GHRHP01286 108 aa13.6□□□□□ -0.23
RAB40C-206ENST00000561781 F6UB75 175 aa13.59□□□□□ -0.23
RAB40C-206ENST00000561781 CREBBPQ92793 2442 aa13.59□□□□□ -0.23
RAB40C-206ENST00000561781 NDUFA1O15239 70 aa13.59□□□□□ -0.23
RAB40C-206ENST00000561781 C1orf195Q5TG92 126 aa13.59□□□□□ -0.23
RAB40C-206ENST00000561781 FAM218AQ96MZ4 157 aa13.59□□□□□ -0.23
RAB40C-206ENST00000561781 C16orf95Q9H693 158 aa13.59□□□□□ -0.23
RAB40C-206ENST00000561781 M0QY20 66 aa13.58□□□□□ -0.24
RAB40C-206ENST00000561781 OVOL2Q9BRP0 275 aa13.58□□□□□ -0.24
RAB40C-206ENST00000561781 DEFB113Q30KQ7 82 aa13.58□□□□□ -0.24
RAB40C-206ENST00000561781 Q8N9W7 124 aa13.58□□□□□ -0.24
RAB40C-206ENST00000561781 A8MZ25 164 aa13.57□□□□□ -0.24
RAB40C-206ENST00000561781 EDN2P20800 178 aa13.57□□□□□ -0.24
RAB40C-206ENST00000561781 MAPK1IP1LQ8NDC0 245 aa13.57□□□□□ -0.24
RAB40C-206ENST00000561781 TLN2Q9Y4G6 2542 aa13.57□□□□□ -0.24
RAB40C-206ENST00000561781 ATP6V0E1O15342 81 aa13.56□□□□□ -0.24
RAB40C-206ENST00000561781 C14orf132Q9NPU4 83 aa13.56□□□□□ -0.24
RAB40C-206ENST00000561781 KNCNA6PVL3 124 aa13.56□□□□□ -0.24
RAB40C-206ENST00000561781 XCL1P47992 114 aa13.56□□□□□ -0.24
RAB40C-206ENST00000561781 C20orf197Q8N268 126 aa13.56□□□□□ -0.24
RAB40C-206ENST00000561781 XCL2Q9UBD3 114 aa13.56□□□□□ -0.24
RAB40C-206ENST00000561781 G3V318 75 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms