RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 GAGE12JA6NER3 117 aa11.86□□□□□ -0.51
COMMD4-204ENST00000561662 RPL36AP83881 106 aaKnown RBP11.86□□□□□ -0.51
COMMD4-204ENST00000561662 GAGE1Q13065 139 aa11.86□□□□□ -0.51
COMMD4-204ENST00000561662 GAGE4Q13068 117 aa11.86□□□□□ -0.51
COMMD4-204ENST00000561662 GAGE5Q13069 117 aa11.86□□□□□ -0.51
COMMD4-204ENST00000561662 GAGE13Q4V321 117 aa11.86□□□□□ -0.51
COMMD4-204ENST00000561662 C18orf32Q8TCD1 76 aa11.86□□□□□ -0.51
COMMD4-204ENST00000561662 RPL36ALQ969Q0 106 aaKnown RBP11.86□□□□□ -0.51
COMMD4-204ENST00000561662 ST20Q9HBF5 79 aa11.86□□□□□ -0.51
COMMD4-204ENST00000561662 TRAV8-3A0A0A6YYJ7 113 aa11.85□□□□□ -0.51
COMMD4-204ENST00000561662 SDHAF1A6NFY7 115 aa11.85□□□□□ -0.51
COMMD4-204ENST00000561662 GTSF1LQ9H1H1 148 aa11.85□□□□□ -0.51
COMMD4-204ENST00000561662 TRBV27A0A0K0K1C4 114 aa11.84□□□□□ -0.51
COMMD4-204ENST00000561662 HIST1H2BKO60814 126 aa11.84□□□□□ -0.51
COMMD4-204ENST00000561662 HIST1H2BJP06899 126 aa11.84□□□□□ -0.51
COMMD4-204ENST00000561662 HIST1H2BOP23527 126 aa11.84□□□□□ -0.51
COMMD4-204ENST00000561662 HIST1H2BBP33778 126 aa11.84□□□□□ -0.51
COMMD4-204ENST00000561662 HIST1H2BDP58876 126 aa11.84□□□□□ -0.51
COMMD4-204ENST00000561662 HIST1H2BCP62807 126 aa11.84□□□□□ -0.51
COMMD4-204ENST00000561662 HIST2H2BEQ16778 126 aa11.84□□□□□ -0.51
COMMD4-204ENST00000561662 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.84□□□□□ -0.51
COMMD4-204ENST00000561662 ATP6V0E2Q8NHE4 81 aa11.84□□□□□ -0.51
COMMD4-204ENST00000561662 HIST1H2BHQ93079 126 aa11.84□□□□□ -0.51
COMMD4-204ENST00000561662 HIST1H2BNQ99877 126 aa11.84□□□□□ -0.51
COMMD4-204ENST00000561662 HIST1H2BMQ99879 126 aa11.84□□□□□ -0.51
COMMD4-204ENST00000561662 SMIM2Q9BVW6 85 aa11.84□□□□□ -0.51
COMMD4-204ENST00000561662 C1orf196B1AJZ1 125 aa11.83□□□□□ -0.52
COMMD4-204ENST00000561662 Q0VG73 95 aa11.83□□□□□ -0.52
COMMD4-204ENST00000561662 IQCJQ1A5X6 159 aa11.83□□□□□ -0.52
COMMD4-204ENST00000561662 Q8N976 141 aa11.83□□□□□ -0.52
COMMD4-204ENST00000561662 URB1-AS1Q96HZ7 61 aa11.83□□□□□ -0.52
COMMD4-204ENST00000561662 MAP1LC3AQ9H492 121 aa11.83□□□□□ -0.52
COMMD4-204ENST00000561662 IGKV2D-24A0A075B6R9 120 aa11.82□□□□□ -0.52
COMMD4-204ENST00000561662 LINC01546A6NGU7 62 aa11.82□□□□□ -0.52
COMMD4-204ENST00000561662 VCYO14598 125 aa11.82□□□□□ -0.52
COMMD4-204ENST00000561662 LOC389332A0A1B0GUA5 103 aa11.81□□□□□ -0.52
COMMD4-204ENST00000561662 IFI27P40305 119 aaPredicted RBP11.81□□□□□ -0.52
COMMD4-204ENST00000561662 Q8N8P6 123 aa11.81□□□□□ -0.52
COMMD4-204ENST00000561662 I3L3M4 83 aa11.8□□□□□ -0.52
COMMD4-204ENST00000561662 TSHBP01222 138 aa11.8□□□□□ -0.52
COMMD4-204ENST00000561662 LINC00310P59036 64 aa11.8□□□□□ -0.52
COMMD4-204ENST00000561662 ODF1Q14990 250 aa11.8□□□□□ -0.52
COMMD4-204ENST00000561662 NTM-AS1Q6ZSK4 140 aa11.79□□□□□ -0.52
COMMD4-204ENST00000561662 NXT2Q9NPJ8 142 aaKnown RBP11.79□□□□□ -0.52
COMMD4-204ENST00000561662 PMCHP20382 165 aa11.78□□□□□ -0.52
COMMD4-204ENST00000561662 COA6Q5JTJ3 125 aaKnown RBP11.78□□□□□ -0.52
COMMD4-204ENST00000561662 NIT1Q86X76 327 aa11.78□□□□□ -0.52
COMMD4-204ENST00000561662 RAB5BP61020 215 aa11.77□□□□□ -0.53
COMMD4-204ENST00000561662 PRSS3P2Q8NHM4 247 aa11.77□□□□□ -0.53
COMMD4-204ENST00000561662 COX11Q9Y6N1 276 aa11.77□□□□□ -0.53
COMMD4-204ENST00000561662 K7EMI3 77 aa11.76□□□□□ -0.53
COMMD4-204ENST00000561662 LINC00614P0C842 121 aa11.76□□□□□ -0.53
COMMD4-204ENST00000561662 RMI2Q96E14 147 aa11.76□□□□□ -0.53
COMMD4-204ENST00000561662 TCAPO15273 167 aa11.75□□□□□ -0.53
COMMD4-204ENST00000561662 NUPR1O60356 82 aa11.75□□□□□ -0.53
COMMD4-204ENST00000561662 ESDP10768 282 aa11.75□□□□□ -0.53
COMMD4-204ENST00000561662 UBE2WQ96B02 151 aa11.75□□□□□ -0.53
COMMD4-204ENST00000561662 KIR2DL4Q99706 377 aa11.75□□□□□ -0.53
COMMD4-204ENST00000561662 CHCHD7Q9BUK0 85 aa11.75□□□□□ -0.53
COMMD4-204ENST00000561662 KLK12Q9UKR0 248 aa11.75□□□□□ -0.53
COMMD4-204ENST00000561662 TRBV6-8A0A0A6YYG3 113 aa11.74□□□□□ -0.53
COMMD4-204ENST00000561662 COTL1Q14019 142 aa11.74□□□□□ -0.53
COMMD4-204ENST00000561662 TMEM97Q5BJF2 176 aa11.74□□□□□ -0.53
COMMD4-204ENST00000561662 BAGE3Q86Y29 109 aa11.74□□□□□ -0.53
COMMD4-204ENST00000561662 CHCHD1Q96BP2 118 aaKnown RBP11.74□□□□□ -0.53
COMMD4-204ENST00000561662 SERF1AO75920 110 aa11.73□□□□□ -0.53
COMMD4-204ENST00000561662 FA2HQ7L5A8 372 aa11.73□□□□□ -0.53
COMMD4-204ENST00000561662 A0A096LNJ9 63 aa11.72□□□□□ -0.53
COMMD4-204ENST00000561662 PANO1I0J062 215 aa11.72□□□□□ -0.53
COMMD4-204ENST00000561662 AP5S1Q9NUS5 200 aa11.72□□□□□ -0.53
COMMD4-204ENST00000561662 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.72□□□□□ -0.53
COMMD4-204ENST00000561662 IGHV1-24A0A0C4DH33 117 aa11.71□□□□□ -0.53
COMMD4-204ENST00000561662 FCER1GP30273 86 aa11.71□□□□□ -0.53
COMMD4-204ENST00000561662 NDUFA6P56556 154 aa11.71□□□□□ -0.53
COMMD4-204ENST00000561662 ORMDL2Q53FV1 153 aa11.71□□□□□ -0.53
COMMD4-204ENST00000561662 RNASEKQ6P5S7 137 aaKnown RBP11.71□□□□□ -0.53
COMMD4-204ENST00000561662 Q6ZRU5 148 aa11.71□□□□□ -0.53
COMMD4-204ENST00000561662 AMTP48728 403 aa11.7□□□□□ -0.54
COMMD4-204ENST00000561662 C20orf203Q8NBC4 194 aa11.7□□□□□ -0.54
COMMD4-204ENST00000561662 TRBV25-1A0A075B6N4 114 aa11.69□□□□□ -0.54
COMMD4-204ENST00000561662 TMEM243Q9BU79 118 aa11.68□□□□□ -0.54
COMMD4-204ENST00000561662 PMCHL1Q16048 86 aa11.67□□□□□ -0.54
COMMD4-204ENST00000561662 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.66□□□□□ -0.54
COMMD4-204ENST00000561662 IGKV2-29A2NJV5 120 aaPredicted RBP11.66□□□□□ -0.54
COMMD4-204ENST00000561662 H7C423 109 aa11.66□□□□□ -0.54
COMMD4-204ENST00000561662 PDZD11Q5EBL8 140 aa11.66□□□□□ -0.54
COMMD4-204ENST00000561662 TOMM6Q96B49 74 aa11.66□□□□□ -0.54
COMMD4-204ENST00000561662 C5orf52A6NGY3 159 aa11.65□□□□□ -0.54
COMMD4-204ENST00000561662 USP17L23D6RBM5 183 aa11.65□□□□□ -0.54
COMMD4-204ENST00000561662 HSBP1O75506 76 aa11.65□□□□□ -0.54
COMMD4-204ENST00000561662 RPL39P62891 51 aaKnown RBP11.65□□□□□ -0.54
COMMD4-204ENST00000561662 C14orf177Q52M58 125 aa11.65□□□□□ -0.54
COMMD4-204ENST00000561662 C2orf66Q6UXQ4 117 aa11.65□□□□□ -0.54
COMMD4-204ENST00000561662 MRPL52Q86TS9 123 aaKnown RBP11.65□□□□□ -0.54
COMMD4-204ENST00000561662 FAM19A2Q8N3H0 131 aa11.65□□□□□ -0.54
COMMD4-204ENST00000561662 FAM104AQ969W3 186 aa11.65□□□□□ -0.54
COMMD4-204ENST00000561662 A0A087WX48 190 aa11.64□□□□□ -0.55
COMMD4-204ENST00000561662 IGIPA6NJ69 53 aa11.64□□□□□ -0.55
COMMD4-204ENST00000561662 HBDP02042 147 aa11.64□□□□□ -0.55
COMMD4-204ENST00000561662 PRSS1P07477 247 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms