RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 M0QY20 66 aa7.63□□□□□ -1.19
GTF3C1-202ENST00000561623 URB1-AS1Q96HZ7 61 aa7.63□□□□□ -1.19
GTF3C1-202ENST00000561623 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.63□□□□□ -1.19
GTF3C1-202ENST00000561623 LINC00269Q8N2A0 174 aa7.63□□□□□ -1.19
GTF3C1-202ENST00000561623 IGHV4-30-4P0DP06 118 aa7.63□□□□□ -1.19
GTF3C1-202ENST00000561623 IGHV4-31P0DP07 118 aa7.63□□□□□ -1.19
GTF3C1-202ENST00000561623 UFSP1Q6NVU6 142 aa7.62□□□□□ -1.19
GTF3C1-202ENST00000561623 ODF3BA8MYP8 253 aa7.62□□□□□ -1.19
GTF3C1-202ENST00000561623 USP17L23D6RBM5 183 aa7.62□□□□□ -1.19
GTF3C1-202ENST00000561623 PLA2G1BP04054 148 aaKnown RBP7.62□□□□□ -1.19
GTF3C1-202ENST00000561623 SERP2Q8N6R1 65 aa7.62□□□□□ -1.19
GTF3C1-202ENST00000561623 CACNA1AO00555 2505 aa7.62□□□□□ -1.19
GTF3C1-202ENST00000561623 H7C423 109 aa7.62□□□□□ -1.19
GTF3C1-202ENST00000561623 C11orf21Q9P2W6 132 aa7.62□□□□□ -1.19
GTF3C1-202ENST00000561623 PCNX3Q9H6A9 2034 aa7.62□□□□□ -1.19
GTF3C1-202ENST00000561623 DEFB131BA0A096LNP1 70 aa7.62□□□□□ -1.19
GTF3C1-202ENST00000561623 FAM240AA0A1B0GVK7 77 aa7.62□□□□□ -1.19
GTF3C1-202ENST00000561623 M0QXV9 152 aa7.62□□□□□ -1.19
GTF3C1-202ENST00000561623 TRBV10-1A0A0K0K1A3 114 aa7.62□□□□□ -1.19
GTF3C1-202ENST00000561623 C22orf34Q6ZV56 151 aa7.61□□□□□ -1.19
GTF3C1-202ENST00000561623 SRCAPQ6ZRS2 3230 aa7.61□□□□□ -1.19
GTF3C1-202ENST00000561623 J3QL48 77 aa7.61□□□□□ -1.19
GTF3C1-202ENST00000561623 DCANP1Q8TF63 244 aa7.61□□□□□ -1.19
GTF3C1-202ENST00000561623 C4orf3Q8WVX3 66 aa7.61□□□□□ -1.19
GTF3C1-202ENST00000561623 ZFAND3Q9H8U3 227 aa7.61□□□□□ -1.19
GTF3C1-202ENST00000561623 TANC2Q9HCD6 1990 aa7.61□□□□□ -1.19
GTF3C1-202ENST00000561623 KIAA1549Q9HCM3 1950 aa7.61□□□□□ -1.19
GTF3C1-202ENST00000561623 A6NDX4 124 aa7.61□□□□□ -1.19
GTF3C1-202ENST00000561623 LST1O00453 97 aa7.61□□□□□ -1.19
GTF3C1-202ENST00000561623 PRR9Q5T870 116 aa7.61□□□□□ -1.19
GTF3C1-202ENST00000561623 V9GYY9 64 aa7.61□□□□□ -1.19
GTF3C1-202ENST00000561623 MED12LQ86YW9 2145 aa7.61□□□□□ -1.19
GTF3C1-202ENST00000561623 C19orf84I3L1E1 186 aa7.61□□□□□ -1.19
GTF3C1-202ENST00000561623 COX7CP15954 63 aa7.61□□□□□ -1.19
GTF3C1-202ENST00000561623 ATP5EP2Q5VTU8 51 aa7.6□□□□□ -1.19
GTF3C1-202ENST00000561623 NUP210LQ5VU65 1888 aa7.6□□□□□ -1.19
GTF3C1-202ENST00000561623 TMEM131Q92545 1883 aa7.6□□□□□ -1.19
GTF3C1-202ENST00000561623 DAZAP2Q15038 168 aaPredicted RBP7.6□□□□□ -1.19
GTF3C1-202ENST00000561623 C14orf177Q52M58 125 aa7.6□□□□□ -1.19
GTF3C1-202ENST00000561623 LRRC75A-AS1Q8N1F1 130 aa7.6□□□□□ -1.19
GTF3C1-202ENST00000561623 SPRY4Q9C004 299 aa7.6□□□□□ -1.19
GTF3C1-202ENST00000561623 TSHBP01222 138 aa7.59□□□□□ -1.19
GTF3C1-202ENST00000561623 REG3AQ06141 175 aa7.59□□□□□ -1.19
GTF3C1-202ENST00000561623 CHCHD10Q8WYQ3 142 aaPredicted RBP7.59□□□□□ -1.19
GTF3C1-202ENST00000561623 PRO0255Q9UI72 69 aa7.59□□□□□ -1.19
GTF3C1-202ENST00000561623 UBE2D3P61077 147 aa7.59□□□□□ -1.19
GTF3C1-202ENST00000561623 A0A087WZ39 114 aa7.58□□□□□ -1.2
GTF3C1-202ENST00000561623 CRIP2P52943 208 aaPredicted RBP7.58□□□□□ -1.2
GTF3C1-202ENST00000561623 IMUPQ9GZP8 106 aa7.58□□□□□ -1.2
GTF3C1-202ENST00000561623 C6orf99Q4VX62 202 aa7.58□□□□□ -1.2
GTF3C1-202ENST00000561623 HRCT1Q6UXD1 115 aa7.58□□□□□ -1.2
GTF3C1-202ENST00000561623 TRBV27A0A0K0K1C4 114 aa7.58□□□□□ -1.2
GTF3C1-202ENST00000561623 C3orf84H3BNL1 204 aa7.58□□□□□ -1.2
GTF3C1-202ENST00000561623 RNASE3P12724 160 aaKnown RBP7.58□□□□□ -1.2
GTF3C1-202ENST00000561623 ODF3Q96PU9 254 aa7.58□□□□□ -1.2
GTF3C1-202ENST00000561623 K7EQG2 157 aa7.58□□□□□ -1.2
GTF3C1-202ENST00000561623 OXLD1Q5BKU9 147 aa7.58□□□□□ -1.2
GTF3C1-202ENST00000561623 PRR15LQ9BU68 103 aa7.58□□□□□ -1.2
GTF3C1-202ENST00000561623 PLXNB1O43157 2135 aa7.57□□□□□ -1.2
GTF3C1-202ENST00000561623 IBA57-AS1B1ANH7 110 aa7.57□□□□□ -1.2
GTF3C1-202ENST00000561623 XAGE1AQ9HD64 81 aa7.57□□□□□ -1.2
GTF3C1-202ENST00000561623 WFDC10BQ8IUB3 73 aa7.57□□□□□ -1.2
GTF3C1-202ENST00000561623 PCDH15Q96QU1 1955 aa7.57□□□□□ -1.2
GTF3C1-202ENST00000561623 TRBV6-5A0A0K0K1A5 114 aa7.57□□□□□ -1.2
GTF3C1-202ENST00000561623 TMEM89A2RUT3 159 aa7.56□□□□□ -1.2
GTF3C1-202ENST00000561623 TIMM17BO60830 172 aa7.56□□□□□ -1.2
GTF3C1-202ENST00000561623 TECTAO75443 2155 aa7.56□□□□□ -1.2
GTF3C1-202ENST00000561623 PRM2P04554 102 aa7.56□□□□□ -1.2
GTF3C1-202ENST00000561623 SMIM11BQ8TCY0 68 aa7.56□□□□□ -1.2
GTF3C1-202ENST00000561623 ZNF462Q96JM2 2506 aa7.56□□□□□ -1.2
GTF3C1-202ENST00000561623 LY6LH3BQJ8 138 aa7.56□□□□□ -1.2
GTF3C1-202ENST00000561623 Q6ZSV7 163 aa7.56□□□□□ -1.2
GTF3C1-202ENST00000561623 HIGD2AQ9BW72 106 aa7.55□□□□□ -1.2
GTF3C1-202ENST00000561623 PRR14LQ5THK1 2151 aa7.55□□□□□ -1.2
GTF3C1-202ENST00000561623 CCKP06307 115 aa7.55□□□□□ -1.2
GTF3C1-202ENST00000561623 POM121L12Q8N7R1 296 aa7.55□□□□□ -1.2
GTF3C1-202ENST00000561623 PRRC2AP48634 2157 aaKnown RBP7.55□□□□□ -1.2
GTF3C1-202ENST00000561623 C1orf158Q8N1D5 194 aa7.55□□□□□ -1.2
GTF3C1-202ENST00000561623 C10orf99Q6UWK7 81 aa7.55□□□□□ -1.2
GTF3C1-202ENST00000561623 Q8NA96 180 aa7.55□□□□□ -1.2
GTF3C1-202ENST00000561623 LINC00482Q8N8I6 264 aa7.55□□□□□ -1.2
GTF3C1-202ENST00000561623 KIR2DL5BQ8NHK3 375 aa7.54□□□□□ -1.2
GTF3C1-202ENST00000561623 C9orf85Q96MD7 179 aa7.54□□□□□ -1.2
GTF3C1-202ENST00000561623 PYGO1Q9Y3Y4 419 aa7.54□□□□□ -1.2
GTF3C1-202ENST00000561623 CRYGDP07320 174 aa7.54□□□□□ -1.2
GTF3C1-202ENST00000561623 A6NED7 52 aa7.54□□□□□ -1.2
GTF3C1-202ENST00000561623 LMO4P61968 165 aa7.54□□□□□ -1.2
GTF3C1-202ENST00000561623 LINC00526Q96FQ7 95 aa7.54□□□□□ -1.2
GTF3C1-202ENST00000561623 A0A087WVE0 104 aa7.53□□□□□ -1.2
GTF3C1-202ENST00000561623 B9D2Q9BPU9 175 aa7.53□□□□□ -1.2
GTF3C1-202ENST00000561623 POLR2KP53803 58 aaKnown RBP7.53□□□□□ -1.2
GTF3C1-202ENST00000561623 IGF2-ASQ6U949 168 aa7.53□□□□□ -1.2
GTF3C1-202ENST00000561623 X6R8D5 127 aa7.53□□□□□ -1.2
GTF3C1-202ENST00000561623 Q6Q795 121 aa7.53□□□□□ -1.2
GTF3C1-202ENST00000561623 Q6ZQY7 126 aa7.53□□□□□ -1.2
GTF3C1-202ENST00000561623 TRBV6-8A0A0A6YYG3 113 aa7.52□□□□□ -1.2
GTF3C1-202ENST00000561623 C1orf195Q5TG92 126 aa7.52□□□□□ -1.2
GTF3C1-202ENST00000561623 COL4A4P53420 1690 aaPredicted RBP7.52□□□□□ -1.21
GTF3C1-202ENST00000561623 FAM222AQ5U5X8 452 aa7.52□□□□□ -1.21
GTF3C1-202ENST00000561623 SERP1Q9Y6X1 66 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms