RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 TRAV13-1A0A0B4J241 112 aa7.2□□□□□ -1.26
TPM1-229ENST00000561242 IFITM10A6NMD0 228 aa7.2□□□□□ -1.26
TPM1-229ENST00000561242 LINC00614P0C842 121 aa7.2□□□□□ -1.26
TPM1-229ENST00000561242 NDUFA6P56556 154 aa7.2□□□□□ -1.26
TPM1-229ENST00000561242 SEC11AP67812 179 aa7.2□□□□□ -1.26
TPM1-229ENST00000561242 TNP2Q05952 138 aa7.2□□□□□ -1.26
TPM1-229ENST00000561242 ENHOQ6UWT2 76 aa7.2□□□□□ -1.26
TPM1-229ENST00000561242 C2orf66Q6UXQ4 117 aa7.2□□□□□ -1.26
TPM1-229ENST00000561242 BAALCQ8WXS3 180 aa7.2□□□□□ -1.26
TPM1-229ENST00000561242 KRTAP1-5Q9BYS1 174 aa7.2□□□□□ -1.26
TPM1-229ENST00000561242 IGLV5-52A0A0A0MRZ9 124 aa7.19□□□□□ -1.26
TPM1-229ENST00000561242 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.19□□□□□ -1.26
TPM1-229ENST00000561242 GAGE12HA6NDE8 117 aa7.19□□□□□ -1.26
TPM1-229ENST00000561242 C16orf90A8MZG2 172 aa7.19□□□□□ -1.26
TPM1-229ENST00000561242 XCL1P47992 114 aa7.19□□□□□ -1.26
TPM1-229ENST00000561242 SPATA12Q7Z6I5 190 aa7.19□□□□□ -1.26
TPM1-229ENST00000561242 Q8N3U1 123 aa7.19□□□□□ -1.26
TPM1-229ENST00000561242 NTN5Q8WTR8 489 aaPredicted RBP7.19□□□□□ -1.26
TPM1-229ENST00000561242 TMEM141Q96I45 108 aa7.19□□□□□ -1.26
TPM1-229ENST00000561242 CDC42SE2Q9NRR3 84 aa7.19□□□□□ -1.26
TPM1-229ENST00000561242 PRR34Q9NV39 138 aa7.19□□□□□ -1.26
TPM1-229ENST00000561242 UBE2D4Q9Y2X8 147 aa7.19□□□□□ -1.26
TPM1-229ENST00000561242 A0A087WTM6 91 aa7.18□□□□□ -1.26
TPM1-229ENST00000561242 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.18□□□□□ -1.26
TPM1-229ENST00000561242 HSBP1O75506 76 aa7.18□□□□□ -1.26
TPM1-229ENST00000561242 CDPF1Q6NVV7 123 aa7.18□□□□□ -1.26
TPM1-229ENST00000561242 CHCHD10Q8WYQ3 142 aaPredicted RBP7.18□□□□□ -1.26
TPM1-229ENST00000561242 GEMIN7Q9H840 131 aaKnown RBP7.18□□□□□ -1.26
TPM1-229ENST00000561242 PKIGQ9Y2B9 76 aa7.18□□□□□ -1.26
TPM1-229ENST00000561242 PYGO1Q9Y3Y4 419 aa7.18□□□□□ -1.26
TPM1-229ENST00000561242 LINC00959A0A1B0GUT2 108 aa7.17□□□□□ -1.26
TPM1-229ENST00000561242 ZNF561-AS1K7EIQ3 104 aa7.17□□□□□ -1.26
TPM1-229ENST00000561242 LECT2O14960 151 aa7.17□□□□□ -1.26
TPM1-229ENST00000561242 NPSP0C0P6 89 aa7.17□□□□□ -1.26
TPM1-229ENST00000561242 RPL39P62891 51 aaKnown RBP7.17□□□□□ -1.26
TPM1-229ENST00000561242 MRPS36P82909 103 aaKnown RBP7.17□□□□□ -1.26
TPM1-229ENST00000561242 DPH3Q96FX2 82 aa7.17□□□□□ -1.26
TPM1-229ENST00000561242 hDV102S1A0JD36 115 aa7.16□□□□□ -1.26
TPM1-229ENST00000561242 COX7A2LO14548 114 aa7.16□□□□□ -1.26
TPM1-229ENST00000561242 ATP5LO75964 103 aa7.16□□□□□ -1.26
TPM1-229ENST00000561242 TRGC2P03986 189 aa7.16□□□□□ -1.26
TPM1-229ENST00000561242 CD164L2Q6UWJ8 174 aa7.16□□□□□ -1.26
TPM1-229ENST00000561242 ERASQ7Z444 233 aa7.16□□□□□ -1.26
TPM1-229ENST00000561242 Q8N814 137 aa7.16□□□□□ -1.26
TPM1-229ENST00000561242 CHCHD1Q96BP2 118 aaKnown RBP7.16□□□□□ -1.26
TPM1-229ENST00000561242 PACRGQ96M98 296 aaPredicted RBP7.16□□□□□ -1.26
TPM1-229ENST00000561242 TENM2Q9NT68 2774 aa7.16□□□□□ -1.26
TPM1-229ENST00000561242 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.15□□□□□ -1.26
TPM1-229ENST00000561242 HBDP02042 147 aa7.15□□□□□ -1.26
TPM1-229ENST00000561242 PRSS1P07477 247 aa7.15□□□□□ -1.26
TPM1-229ENST00000561242 RNASE13Q5GAN3 156 aaKnown RBP7.15□□□□□ -1.26
TPM1-229ENST00000561242 TOMM6Q96B49 74 aa7.15□□□□□ -1.26
TPM1-229ENST00000561242 IGHV1-58A0A0C4DH39 117 aa7.14□□□□□ -1.27
TPM1-229ENST00000561242 USP17L23D6RBM5 183 aa7.14□□□□□ -1.27
TPM1-229ENST00000561242 PRSS2P07478 247 aa7.14□□□□□ -1.27
TPM1-229ENST00000561242 Q6ZUT4 128 aa7.14□□□□□ -1.27
TPM1-229ENST00000561242 C18orf32Q8TCD1 76 aa7.14□□□□□ -1.27
TPM1-229ENST00000561242 TIMM17AQ99595 171 aa7.14□□□□□ -1.27
TPM1-229ENST00000561242 GCSHP23434 173 aa7.13□□□□□ -1.27
TPM1-229ENST00000561242 Q6ZRN7 208 aaPredicted RBP7.13□□□□□ -1.27
TPM1-229ENST00000561242 H3BRM9 83 aa7.12□□□□□ -1.27
TPM1-229ENST00000561242 ATP6V1G1O75348 118 aa7.12□□□□□ -1.27
TPM1-229ENST00000561242 HERVK_113P63121 156 aa7.12□□□□□ -1.27
TPM1-229ENST00000561242 HSPB8Q9UJY1 196 aa7.12□□□□□ -1.27
TPM1-229ENST00000561242 DNAH7Q8WXX0 4024 aa7.12□□□□□ -1.27
TPM1-229ENST00000561242 IGLV4-3A0A075B6K6 122 aa7.11□□□□□ -1.27
TPM1-229ENST00000561242 COLCA2A8K830 154 aa7.11□□□□□ -1.27
TPM1-229ENST00000561242 SCO1O75880 301 aa7.11□□□□□ -1.27
TPM1-229ENST00000561242 PMVKQ15126 192 aa7.11□□□□□ -1.27
TPM1-229ENST00000561242 C5orf38Q86SI9 138 aa7.11□□□□□ -1.27
TPM1-229ENST00000561242 OPRPNQ99935 248 aaPredicted RBP7.11□□□□□ -1.27
TPM1-229ENST00000561242 LRCOL1A6NCL2 159 aa7.09□□□□□ -1.27
TPM1-229ENST00000561242 LEPROTL1O95214 131 aa7.09□□□□□ -1.27
TPM1-229ENST00000561242 S100A6P06703 90 aa7.09□□□□□ -1.27
TPM1-229ENST00000561242 CKS1BP61024 79 aa7.09□□□□□ -1.27
TPM1-229ENST00000561242 HIGD2BQ4VC39 106 aa7.09□□□□□ -1.27
TPM1-229ENST00000561242 LINC00469Q8N7U9 141 aa7.09□□□□□ -1.27
TPM1-229ENST00000561242 YPEL4Q96NS1 127 aa7.09□□□□□ -1.27
TPM1-229ENST00000561242 IGHV3-64A0A075B6Q5 118 aa7.08□□□□□ -1.28
TPM1-229ENST00000561242 LINC01546A6NGU7 62 aa7.08□□□□□ -1.28
TPM1-229ENST00000561242 IGIPA6NJ69 53 aa7.08□□□□□ -1.28
TPM1-229ENST00000561242 H0Y8G0 127 aa7.08□□□□□ -1.28
TPM1-229ENST00000561242 FOXI1Q12951 378 aa7.08□□□□□ -1.28
TPM1-229ENST00000561242 PMCHL1Q16048 86 aa7.08□□□□□ -1.28
TPM1-229ENST00000561242 C6orf226Q5I0X4 101 aa7.08□□□□□ -1.28
TPM1-229ENST00000561242 ORAOV1Q8WV07 137 aa7.08□□□□□ -1.28
TPM1-229ENST00000561242 CAMK2N2Q96S95 79 aa7.08□□□□□ -1.28
TPM1-229ENST00000561242 TOMM7Q9P0U1 55 aa7.08□□□□□ -1.28
TPM1-229ENST00000561242 F8WDY8 70 aa7.07□□□□□ -1.28
TPM1-229ENST00000561242 SPAG11BQ08648 103 aa7.07□□□□□ -1.28
TPM1-229ENST00000561242 OR10D4PQ8NGN7 298 aa7.07□□□□□ -1.28
TPM1-229ENST00000561242 IFI27L1Q96BM0 104 aa7.07□□□□□ -1.28
TPM1-229ENST00000561242 MAP1LC3CQ9BXW4 147 aa7.07□□□□□ -1.28
TPM1-229ENST00000561242 CST9LQ9H4G1 147 aa7.07□□□□□ -1.28
TPM1-229ENST00000561242 TINCRA0A1B0GVN0 87 aa7.06□□□□□ -1.28
TPM1-229ENST00000561242 NDUFA1O15239 70 aa7.06□□□□□ -1.28
TPM1-229ENST00000561242 FABP4P15090 132 aa7.06□□□□□ -1.28
TPM1-229ENST00000561242 UBE2D1P51668 147 aa7.06□□□□□ -1.28
TPM1-229ENST00000561242 SYCNQ0VAF6 134 aa7.06□□□□□ -1.28
TPM1-229ENST00000561242 TMEM170BQ5T4T1 132 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms