RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 TRAV8-4A0A0B4J246 113 aa6.63□□□□□ -1.35
CDC42BPB-207ENST00000560492 IGKV3OR2-268A0A0C4DH90 116 aa6.63□□□□□ -1.35
CDC42BPB-207ENST00000560492 XKRY2A2RUG3 117 aa6.63□□□□□ -1.35
CDC42BPB-207ENST00000560492 UBE2L6O14933 153 aa6.63□□□□□ -1.35
CDC42BPB-207ENST00000560492 COX6A2Q02221 97 aa6.63□□□□□ -1.35
CDC42BPB-207ENST00000560492 NUDT10Q8NFP7 164 aa6.63□□□□□ -1.35
CDC42BPB-207ENST00000560492 NUDT11Q96G61 164 aa6.63□□□□□ -1.35
CDC42BPB-207ENST00000560492 LINC01600Q96MT4 127 aa6.63□□□□□ -1.35
CDC42BPB-207ENST00000560492 AP1S3Q96PC3 154 aa6.63□□□□□ -1.35
CDC42BPB-207ENST00000560492 HIGD2BQ4VC39 106 aa6.62□□□□□ -1.35
CDC42BPB-207ENST00000560492 REG3GQ6UW15 175 aa6.62□□□□□ -1.35
CDC42BPB-207ENST00000560492 COX8CQ7Z4L0 72 aa6.62□□□□□ -1.35
CDC42BPB-207ENST00000560492 STPG4Q8N801 248 aa6.62□□□□□ -1.35
CDC42BPB-207ENST00000560492 OR2D3Q8NGH3 330 aa6.62□□□□□ -1.35
CDC42BPB-207ENST00000560492 BTF3L4Q96K17 158 aa6.62□□□□□ -1.35
CDC42BPB-207ENST00000560492 IMMP2LQ96T52 175 aa6.62□□□□□ -1.35
CDC42BPB-207ENST00000560492 TMEM243Q9BU79 118 aa6.62□□□□□ -1.35
CDC42BPB-207ENST00000560492 TPPP3Q9BW30 176 aa6.62□□□□□ -1.35
CDC42BPB-207ENST00000560492 PLAC8Q9NZF1 115 aa6.62□□□□□ -1.35
CDC42BPB-207ENST00000560492 V9GYV3 84 aa6.62□□□□□ -1.35
CDC42BPB-207ENST00000560492 C19orf71A6NCJ1 209 aa6.61□□□□□ -1.35
CDC42BPB-207ENST00000560492 A8MWL6 223 aa6.61□□□□□ -1.35
CDC42BPB-207ENST00000560492 H7C1H1 209 aa6.61□□□□□ -1.35
CDC42BPB-207ENST00000560492 GAS8-AS1O95177 125 aa6.61□□□□□ -1.35
CDC42BPB-207ENST00000560492 RPS20P60866 119 aaKnown RBP6.61□□□□□ -1.35
CDC42BPB-207ENST00000560492 PRR3P79522 188 aaKnown RBP6.61□□□□□ -1.35
CDC42BPB-207ENST00000560492 IQCJQ1A5X6 159 aa6.61□□□□□ -1.35
CDC42BPB-207ENST00000560492 CT83Q5H943 113 aa6.61□□□□□ -1.35
CDC42BPB-207ENST00000560492 CFAP161Q6P656 301 aa6.61□□□□□ -1.35
CDC42BPB-207ENST00000560492 C20orf203Q8NBC4 194 aa6.61□□□□□ -1.35
CDC42BPB-207ENST00000560492 IGLV4-60A0A075B6I1 120 aa6.6□□□□□ -1.35
CDC42BPB-207ENST00000560492 GAGE12HA6NDE8 117 aa6.6□□□□□ -1.35
CDC42BPB-207ENST00000560492 H3BS24 57 aa6.6□□□□□ -1.35
CDC42BPB-207ENST00000560492 SLPIP03973 132 aa6.6□□□□□ -1.35
CDC42BPB-207ENST00000560492 GZMBP10144 247 aa6.6□□□□□ -1.35
CDC42BPB-207ENST00000560492 RPS10P46783 165 aaKnown RBP6.6□□□□□ -1.35
CDC42BPB-207ENST00000560492 PRSS3P2Q8NHM4 247 aa6.6□□□□□ -1.35
CDC42BPB-207ENST00000560492 TSKUQ8WUA8 353 aa6.6□□□□□ -1.35
CDC42BPB-207ENST00000560492 BORCS7Q96B45 105 aa6.6□□□□□ -1.35
CDC42BPB-207ENST00000560492 NAT8BQ9UHF3 227 aa6.6□□□□□ -1.35
CDC42BPB-207ENST00000560492 TRAV9-1A0A075B6T8 112 aa6.59□□□□□ -1.35
CDC42BPB-207ENST00000560492 TGIF2-C20orf24A0A0A6YYL0 155 aa6.59□□□□□ -1.35
CDC42BPB-207ENST00000560492 A0A0J9YXV3 536 aa6.59□□□□□ -1.35
CDC42BPB-207ENST00000560492 SNAI2O43623 268 aa6.59□□□□□ -1.35
CDC42BPB-207ENST00000560492 CXCL1P09341 107 aa6.59□□□□□ -1.35
CDC42BPB-207ENST00000560492 OR5AL1P0C617 328 aa6.59□□□□□ -1.35
CDC42BPB-207ENST00000560492 GFRA4Q9GZZ7 299 aa6.59□□□□□ -1.35
CDC42BPB-207ENST00000560492 TNXBP22105 4242 aa6.59□□□□□ -1.35
CDC42BPB-207ENST00000560492 SMIM27A0A1W2PRY6 76 aa6.58□□□□□ -1.36
CDC42BPB-207ENST00000560492 HIGD1CA8MV81 97 aa6.58□□□□□ -1.36
CDC42BPB-207ENST00000560492 AMTP48728 403 aa6.58□□□□□ -1.36
CDC42BPB-207ENST00000560492 LCE5AQ5TCM9 118 aa6.58□□□□□ -1.36
CDC42BPB-207ENST00000560492 SUMO4Q6EEV6 95 aa6.58□□□□□ -1.36
CDC42BPB-207ENST00000560492 C15orf56Q8N910 161 aa6.58□□□□□ -1.36
CDC42BPB-207ENST00000560492 TRBV24-1A0A075B6N3 115 aa6.57□□□□□ -1.36
CDC42BPB-207ENST00000560492 A0A1B0GUV1 79 aa6.57□□□□□ -1.36
CDC42BPB-207ENST00000560492 FAM231BA6NCW3 169 aa6.57□□□□□ -1.36
CDC42BPB-207ENST00000560492 COLCA2A8K830 154 aa6.57□□□□□ -1.36
CDC42BPB-207ENST00000560492 RAB5AP20339 215 aa6.57□□□□□ -1.36
CDC42BPB-207ENST00000560492 COTL1Q14019 142 aa6.57□□□□□ -1.36
CDC42BPB-207ENST00000560492 AMMECR1LQ6DCA0 310 aa6.57□□□□□ -1.36
CDC42BPB-207ENST00000560492 SPINK6Q6UWN8 80 aa6.57□□□□□ -1.36
CDC42BPB-207ENST00000560492 FER1L6-AS1Q8NA97 138 aa6.57□□□□□ -1.36
CDC42BPB-207ENST00000560492 PGLYRP4Q96LB8 373 aa6.57□□□□□ -1.36
CDC42BPB-207ENST00000560492 A0A096LNI7 61 aa6.56□□□□□ -1.36
CDC42BPB-207ENST00000560492 M0QY20 66 aa6.56□□□□□ -1.36
CDC42BPB-207ENST00000560492 MRPL54Q6P161 138 aaKnown RBP6.56□□□□□ -1.36
CDC42BPB-207ENST00000560492 RNASEKQ6P5S7 137 aaKnown RBP6.56□□□□□ -1.36
CDC42BPB-207ENST00000560492 RASL11AQ6T310 242 aa6.56□□□□□ -1.36
CDC42BPB-207ENST00000560492 NUP35Q8NFH5 326 aa6.56□□□□□ -1.36
CDC42BPB-207ENST00000560492 YPEL4Q96NS1 127 aa6.56□□□□□ -1.36
CDC42BPB-207ENST00000560492 A0A1B0GUT8 65 aa6.55□□□□□ -1.36
CDC42BPB-207ENST00000560492 S100A8P05109 93 aa6.55□□□□□ -1.36
CDC42BPB-207ENST00000560492 RIGQ13278 110 aa6.55□□□□□ -1.36
CDC42BPB-207ENST00000560492 COX19Q49B96 90 aa6.55□□□□□ -1.36
CDC42BPB-207ENST00000560492 ATP5L2Q7Z4Y8 100 aa6.55□□□□□ -1.36
CDC42BPB-207ENST00000560492 CHCHD10Q8WYQ3 142 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPB-207ENST00000560492 LINC00474Q9P2X8 69 aa6.55□□□□□ -1.36
CDC42BPB-207ENST00000560492 PKIGQ9Y2B9 76 aa6.55□□□□□ -1.36
CDC42BPB-207ENST00000560492 TMA7Q9Y2S6 64 aaKnown RBP6.55□□□□□ -1.36
CDC42BPB-207ENST00000560492 C1orf196B1AJZ1 125 aa6.54□□□□□ -1.36
CDC42BPB-207ENST00000560492 F2Z2F3 143 aa6.54□□□□□ -1.36
CDC42BPB-207ENST00000560492 TRGC1P0CF51 173 aa6.54□□□□□ -1.36
CDC42BPB-207ENST00000560492 CTRLP40313 264 aa6.54□□□□□ -1.36
CDC42BPB-207ENST00000560492 CAMPP49913 170 aa6.54□□□□□ -1.36
CDC42BPB-207ENST00000560492 HBBP68871 147 aa6.54□□□□□ -1.36
CDC42BPB-207ENST00000560492 LYZL1Q6UWQ5 148 aa6.54□□□□□ -1.36
CDC42BPB-207ENST00000560492 Q6ZRP5 223 aa6.54□□□□□ -1.36
CDC42BPB-207ENST00000560492 NIT2Q9NQR4 276 aa6.54□□□□□ -1.36
CDC42BPB-207ENST00000560492 A0A1B0GW15 77 aa6.53□□□□□ -1.36
CDC42BPB-207ENST00000560492 MT-ND6P03923 174 aa6.53□□□□□ -1.36
CDC42BPB-207ENST00000560492 KRTAP10-8P60410 259 aa6.53□□□□□ -1.36
CDC42BPB-207ENST00000560492 CACNG7P62955 275 aa6.53□□□□□ -1.36
CDC42BPB-207ENST00000560492 TWIST1Q15672 202 aa6.53□□□□□ -1.36
CDC42BPB-207ENST00000560492 TRAPPC1Q9Y5R8 145 aa6.53□□□□□ -1.36
CDC42BPB-207ENST00000560492 IGLC6P0CF74 106 aa6.52□□□□□ -1.37
CDC42BPB-207ENST00000560492 FOXA3P55318 350 aaPredicted RBP6.52□□□□□ -1.37
CDC42BPB-207ENST00000560492 RAB5BP61020 215 aa6.52□□□□□ -1.37
CDC42BPB-207ENST00000560492 SMIM15Q7Z3B0 74 aa6.52□□□□□ -1.37
CDC42BPB-207ENST00000560492 LINC00526Q96FQ7 95 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms