RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 CITED1Q99966 193 aa10.1□□□□□ -0.79
CARMIL3-203ENST00000560349 ANK2Q01484 3957 aa10.1□□□□□ -0.79
CARMIL3-203ENST00000560349 ZNF815PA8K554 130 aa10.1□□□□□ -0.79
CARMIL3-203ENST00000560349 RS1O15537 224 aa10.1□□□□□ -0.79
CARMIL3-203ENST00000560349 SH2D6Q7Z4S9 175 aa10.1□□□□□ -0.79
CARMIL3-203ENST00000560349 IL17DQ8TAD2 202 aa10.1□□□□□ -0.79
CARMIL3-203ENST00000560349 COL6A5A8TX70 2615 aa10.09□□□□□ -0.79
CARMIL3-203ENST00000560349 INSL3P51460 131 aa10.09□□□□□ -0.79
CARMIL3-203ENST00000560349 ZNRF2Q8NHG8 242 aa10.09□□□□□ -0.79
CARMIL3-203ENST00000560349 PMVKQ15126 192 aa10.09□□□□□ -0.79
CARMIL3-203ENST00000560349 TRGV2A0A075B6R0 118 aa10.08□□□□□ -0.8
CARMIL3-203ENST00000560349 PRO0461Q9UI25 63 aa10.08□□□□□ -0.8
CARMIL3-203ENST00000560349 IGHV3-64A0A075B6Q5 118 aa10.08□□□□□ -0.8
CARMIL3-203ENST00000560349 RHODO00212 210 aa10.08□□□□□ -0.8
CARMIL3-203ENST00000560349 SPINK8P0C7L1 97 aa10.08□□□□□ -0.8
CARMIL3-203ENST00000560349 RHOHQ15669 191 aa10.08□□□□□ -0.8
CARMIL3-203ENST00000560349 ETDBQ3ZM63 59 aa10.08□□□□□ -0.8
CARMIL3-203ENST00000560349 TMEM170BQ5T4T1 132 aa10.08□□□□□ -0.8
CARMIL3-203ENST00000560349 LOC100131303A0A0U1RQF7 123 aa10.07□□□□□ -0.8
CARMIL3-203ENST00000560349 TIMM17AQ99595 171 aa10.07□□□□□ -0.8
CARMIL3-203ENST00000560349 CYSRT1A8MQ03 144 aa10.07□□□□□ -0.8
CARMIL3-203ENST00000560349 GAGE13Q4V321 117 aa10.07□□□□□ -0.8
CARMIL3-203ENST00000560349 SCGB1D4Q6XE38 83 aa10.07□□□□□ -0.8
CARMIL3-203ENST00000560349 NOTCH1P46531 2555 aa10.07□□□□□ -0.8
CARMIL3-203ENST00000560349 IGLV4-3A0A075B6K6 122 aa10.06□□□□□ -0.8
CARMIL3-203ENST00000560349 GAGE12JA6NER3 117 aa10.06□□□□□ -0.8
CARMIL3-203ENST00000560349 DEFB4AO15263 64 aa10.06□□□□□ -0.8
CARMIL3-203ENST00000560349 CMC4P56277 68 aaPredicted RBP10.06□□□□□ -0.8
CARMIL3-203ENST00000560349 GAGE4Q13068 117 aa10.06□□□□□ -0.8
CARMIL3-203ENST00000560349 SLC25A29Q8N8R3 303 aa10.06□□□□□ -0.8
CARMIL3-203ENST00000560349 MT-ATP8P03928 68 aa10.06□□□□□ -0.8
CARMIL3-203ENST00000560349 TMEM141Q96I45 108 aa10.06□□□□□ -0.8
CARMIL3-203ENST00000560349 DEFB130BP0DP73 79 aa10.05□□□□□ -0.8
CARMIL3-203ENST00000560349 DEFB130AP0DP74 79 aa10.05□□□□□ -0.8
CARMIL3-203ENST00000560349 SRSF9Q13242 221 aaKnown RBP eCLIP10.05□□□□□ -0.8
CARMIL3-203ENST00000560349 FAM104AQ969W3 186 aa10.05□□□□□ -0.8
CARMIL3-203ENST00000560349 CHCHD7Q9BUK0 85 aa10.05□□□□□ -0.8
CARMIL3-203ENST00000560349 A0A0J9YXV3 536 aa10.05□□□□□ -0.8
CARMIL3-203ENST00000560349 LINC01549A6NIU2 74 aa10.05□□□□□ -0.8
CARMIL3-203ENST00000560349 C16orf74Q96GX8 76 aa10.05□□□□□ -0.8
CARMIL3-203ENST00000560349 ANAPC13Q9BS18 74 aa10.05□□□□□ -0.8
CARMIL3-203ENST00000560349 C1QTNF4Q9BXJ3 329 aa10.05□□□□□ -0.8
CARMIL3-203ENST00000560349 UBE2D1P51668 147 aa10.04□□□□□ -0.8
CARMIL3-203ENST00000560349 PIK3CD-AS1Q5SR53 167 aa10.04□□□□□ -0.8
CARMIL3-203ENST00000560349 TSPEAR-AS2P59090 65 aa10.04□□□□□ -0.8
CARMIL3-203ENST00000560349 C9orf66Q5T8R8 295 aa10.04□□□□□ -0.8
CARMIL3-203ENST00000560349 PTH2Q96A98 100 aa10.04□□□□□ -0.8
CARMIL3-203ENST00000560349 EDA2RQ9HAV5 297 aa10.04□□□□□ -0.8
CARMIL3-203ENST00000560349 A0A0J9YY99 117 aa10.03□□□□□ -0.8
CARMIL3-203ENST00000560349 DEFB135Q30KP9 77 aa10.03□□□□□ -0.8
CARMIL3-203ENST00000560349 SFTA2Q6UW10 78 aa10.03□□□□□ -0.8
CARMIL3-203ENST00000560349 CDIP1Q9H305 208 aa10.03□□□□□ -0.8
CARMIL3-203ENST00000560349 VCX2Q9H322 139 aa10.03□□□□□ -0.8
CARMIL3-203ENST00000560349 K7EQD1 137 aa10.03□□□□□ -0.8
CARMIL3-203ENST00000560349 Q6ZUT4 128 aa10.03□□□□□ -0.8
CARMIL3-203ENST00000560349 TRAV4A0A0B4J268 109 aa10.02□□□□□ -0.8
CARMIL3-203ENST00000560349 LINC00694P0DN24 101 aa10.02□□□□□ -0.81
CARMIL3-203ENST00000560349 DAZ2Q13117 558 aaKnown RBP10.02□□□□□ -0.81
CARMIL3-203ENST00000560349 PAPPA-AS1Q5QFB9 102 aa10.02□□□□□ -0.81
CARMIL3-203ENST00000560349 APOMO95445 188 aa10.01□□□□□ -0.81
CARMIL3-203ENST00000560349 SMCPP49901 116 aaPredicted RBP10.01□□□□□ -0.81
CARMIL3-203ENST00000560349 XGP55808 180 aa10.01□□□□□ -0.81
CARMIL3-203ENST00000560349 HERVK_113P61574 105 aa10.01□□□□□ -0.81
CARMIL3-203ENST00000560349 UBE2D4Q9Y2X8 147 aa10.01□□□□□ -0.81
CARMIL3-203ENST00000560349 AMELXQ99217 191 aa10□□□□□ -0.81
CARMIL3-203ENST00000560349 TRGV4A0A0C4DH28 118 aa10□□□□□ -0.81
CARMIL3-203ENST00000560349 NTM-AS1Q6ZSK4 140 aa10□□□□□ -0.81
CARMIL3-203ENST00000560349 RPL36AP83881 106 aaKnown RBP10□□□□□ -0.81
CARMIL3-203ENST00000560349 KRTAP24-1Q3LI83 254 aa10□□□□□ -0.81
CARMIL3-203ENST00000560349 RPL36ALQ969Q0 106 aaKnown RBP10□□□□□ -0.81
CARMIL3-203ENST00000560349 CMYA5Q8N3K9 4069 aa9.99□□□□□ -0.81
CARMIL3-203ENST00000560349 LOC107984156A0A0G2JMH3 177 aa9.99□□□□□ -0.81
CARMIL3-203ENST00000560349 IGHV3-30P01768 117 aa9.99□□□□□ -0.81
CARMIL3-203ENST00000560349 IGHV3-30-5P0DP03 117 aa9.99□□□□□ -0.81
CARMIL3-203ENST00000560349 OXLD1Q5BKU9 147 aa9.99□□□□□ -0.81
CARMIL3-203ENST00000560349 ARL17AQ8IVW1 177 aa9.99□□□□□ -0.81
CARMIL3-203ENST00000560349 NHLRC4P0CG21 123 aaPredicted RBP9.99□□□□□ -0.81
CARMIL3-203ENST00000560349 PSMB2P49721 201 aa9.99□□□□□ -0.81
CARMIL3-203ENST00000560349 UBE2D3P61077 147 aa9.99□□□□□ -0.81
CARMIL3-203ENST00000560349 UBE2D2P62837 147 aa9.99□□□□□ -0.81
CARMIL3-203ENST00000560349 X6R8D5 127 aa9.99□□□□□ -0.81
CARMIL3-203ENST00000560349 CFC1BP0CG36 223 aa9.98□□□□□ -0.81
CARMIL3-203ENST00000560349 CFC1P0CG37 223 aa9.98□□□□□ -0.81
CARMIL3-203ENST00000560349 ZNF22P17026 224 aaPredicted RBP9.98□□□□□ -0.81
CARMIL3-203ENST00000560349 DNAJC30Q96LL9 226 aa9.98□□□□□ -0.81
CARMIL3-203ENST00000560349 A8MZ25 164 aa9.98□□□□□ -0.81
CARMIL3-203ENST00000560349 M0QXV9 152 aa9.98□□□□□ -0.81
CARMIL3-203ENST00000560349 TRAV8-3A0A0A6YYJ7 113 aa9.97□□□□□ -0.81
CARMIL3-203ENST00000560349 J3QQQ9 107 aa9.97□□□□□ -0.81
CARMIL3-203ENST00000560349 NBEAL1Q6ZS30 2694 aa9.97□□□□□ -0.81
CARMIL3-203ENST00000560349 NFE4Q86UQ8 179 aa9.97□□□□□ -0.81
CARMIL3-203ENST00000560349 A0A096LPF7 62 aa9.96□□□□□ -0.81
CARMIL3-203ENST00000560349 DGAT2L7PQ6IED9 249 aa9.96□□□□□ -0.81
CARMIL3-203ENST00000560349 OVOL2Q9BRP0 275 aa9.96□□□□□ -0.81
CARMIL3-203ENST00000560349 PPDPFQ9H3Y8 114 aa9.96□□□□□ -0.81
CARMIL3-203ENST00000560349 TENM3Q9P273 2699 aa9.96□□□□□ -0.82
CARMIL3-203ENST00000560349 FOXI1Q12951 378 aa9.96□□□□□ -0.82
CARMIL3-203ENST00000560349 PYGO1Q9Y3Y4 419 aa9.96□□□□□ -0.82
CARMIL3-203ENST00000560349 FHL2Q14192 279 aa9.95□□□□□ -0.82
CARMIL3-203ENST00000560349 TMEM223A0PJW6 202 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms