RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 Q8N8P6 123 aa13.42□□□□□ -0.26
TSPAN3-207ENST00000559494 BAALCQ8WXS3 180 aa13.42□□□□□ -0.26
TSPAN3-207ENST00000559494 TRAPPC1Q9Y5R8 145 aa13.42□□□□□ -0.26
TSPAN3-207ENST00000559494 FUSP35637 526 aaKnown RBP eCLIP13.41□□□□□ -0.263e-6■□□□□ 10.8
TSPAN3-207ENST00000559494 TMEM101Q96IK0 257 aa13.41□□□□□ -0.26
TSPAN3-207ENST00000559494 LRP1BQ9NZR2 4599 aa13.41□□□□□ -0.26
TSPAN3-207ENST00000559494 IGLV10-54A0A075B6I4 117 aa13.4□□□□□ -0.26
TSPAN3-207ENST00000559494 LECT2O14960 151 aa13.4□□□□□ -0.26
TSPAN3-207ENST00000559494 RAB5AP20339 215 aa13.4□□□□□ -0.26
TSPAN3-207ENST00000559494 RPL39P62891 51 aaKnown RBP13.4□□□□□ -0.26
TSPAN3-207ENST00000559494 OR5A1Q8NGJ0 315 aa13.4□□□□□ -0.26
TSPAN3-207ENST00000559494 ALKBH7Q9BT30 221 aaPredicted RBP13.4□□□□□ -0.26
TSPAN3-207ENST00000559494 CDC42SE2Q9NRR3 84 aa13.4□□□□□ -0.26
TSPAN3-207ENST00000559494 UBE2D4Q9Y2X8 147 aa13.4□□□□□ -0.26
TSPAN3-207ENST00000559494 TRAV8-4A0A0B4J246 113 aa13.39□□□□□ -0.27
TSPAN3-207ENST00000559494 IGKV3OR2-268A0A0C4DH90 116 aa13.39□□□□□ -0.27
TSPAN3-207ENST00000559494 TMEM18Q96B42 140 aa13.39□□□□□ -0.27
TSPAN3-207ENST00000559494 TIMM21Q9BVV7 248 aa13.39□□□□□ -0.27
TSPAN3-207ENST00000559494 PGPEP1Q9NXJ5 209 aa13.39□□□□□ -0.27
TSPAN3-207ENST00000559494 CSDC2Q9Y534 153 aaKnown RBP13.39□□□□□ -0.27
TSPAN3-207ENST00000559494 COLCA2A8K830 154 aa13.38□□□□□ -0.27
TSPAN3-207ENST00000559494 IFI27P40305 119 aaPredicted RBP13.38□□□□□ -0.27
TSPAN3-207ENST00000559494 DGAT2L7PQ6IED9 249 aa13.38□□□□□ -0.27
TSPAN3-207ENST00000559494 ZNF664Q8N3J9 261 aa13.38□□□□□ -0.27
TSPAN3-207ENST00000559494 NXT2Q9NPJ8 142 aaKnown RBP13.38□□□□□ -0.27
TSPAN3-207ENST00000559494 C16orf90A8MZG2 172 aa13.37□□□□□ -0.27
TSPAN3-207ENST00000559494 S100A1P23297 94 aa13.37□□□□□ -0.27
TSPAN3-207ENST00000559494 SMAGPQ0VAQ4 97 aa13.37□□□□□ -0.27
TSPAN3-207ENST00000559494 Q8N814 137 aa13.37□□□□□ -0.27
TSPAN3-207ENST00000559494 FAM104AQ969W3 186 aa13.36□□□□□ -0.27
TSPAN3-207ENST00000559494 LINC00959A0A1B0GUT2 108 aa13.34□□□□□ -0.27
TSPAN3-207ENST00000559494 RNASE13Q5GAN3 156 aaKnown RBP13.34□□□□□ -0.27
TSPAN3-207ENST00000559494 K7EMI3 77 aa13.33□□□□□ -0.28
TSPAN3-207ENST00000559494 Q6ZUT4 128 aa13.33□□□□□ -0.28
TSPAN3-207ENST00000559494 PRSS3P2Q8NHM4 247 aa13.33□□□□□ -0.28
TSPAN3-207ENST00000559494 CHCHD10Q8WYQ3 142 aaPredicted RBP13.33□□□□□ -0.28
TSPAN3-207ENST00000559494 OPRPNQ99935 248 aaPredicted RBP13.33□□□□□ -0.28
TSPAN3-207ENST00000559494 KRTAP17-1Q9BYP8 105 aa13.33□□□□□ -0.28
TSPAN3-207ENST00000559494 SPANXA1Q9NS26 97 aa13.33□□□□□ -0.28
TSPAN3-207ENST00000559494 GAGE12HA6NDE8 117 aa13.32□□□□□ -0.28
TSPAN3-207ENST00000559494 USP17L23D6RBM5 183 aa13.32□□□□□ -0.28
TSPAN3-207ENST00000559494 ORMDL2Q53FV1 153 aa13.32□□□□□ -0.28
TSPAN3-207ENST00000559494 CDPF1Q6NVV7 123 aa13.32□□□□□ -0.28
TSPAN3-207ENST00000559494 TRGC2P03986 189 aa13.3□□□□□ -0.28
TSPAN3-207ENST00000559494 MRPS36P82909 103 aaKnown RBP13.3□□□□□ -0.28
TSPAN3-207ENST00000559494 C2orf66Q6UXQ4 117 aa13.3□□□□□ -0.28
TSPAN3-207ENST00000559494 NTN5Q8WTR8 489 aaPredicted RBP13.3□□□□□ -0.28
TSPAN3-207ENST00000559494 PYGO1Q9Y3Y4 419 aa13.3□□□□□ -0.28
TSPAN3-207ENST00000559494 KIAA1109Q2LD37 5005 aa13.29□□□□□ -0.28
TSPAN3-207ENST00000559494 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.29□□□□□ -0.28
TSPAN3-207ENST00000559494 LINC01546A6NGU7 62 aa13.29□□□□□ -0.28
TSPAN3-207ENST00000559494 SS18Q15532 418 aa13.29□□□□□ -0.28
TSPAN3-207ENST00000559494 C18orf32Q8TCD1 76 aa13.29□□□□□ -0.28
TSPAN3-207ENST00000559494 CYSLTR1Q9Y271 337 aa13.29□□□□□ -0.28
TSPAN3-207ENST00000559494 IGLV5-52A0A0A0MRZ9 124 aa13.28□□□□□ -0.28
TSPAN3-207ENST00000559494 CCL25O15444 150 aa13.28□□□□□ -0.28
TSPAN3-207ENST00000559494 PRSS1P07477 247 aa13.27□□□□□ -0.29
TSPAN3-207ENST00000559494 XCL1P47992 114 aa13.27□□□□□ -0.29
TSPAN3-207ENST00000559494 FOXI1Q12951 378 aa13.27□□□□□ -0.29
TSPAN3-207ENST00000559494 C14orf177Q52M58 125 aa13.27□□□□□ -0.29
TSPAN3-207ENST00000559494 APOBP04114 4563 aaKnown RBP13.26□□□□□ -0.29
TSPAN3-207ENST00000559494 IGLV4-3A0A075B6K6 122 aa13.26□□□□□ -0.29
TSPAN3-207ENST00000559494 TRAV13-1A0A0B4J241 112 aa13.26□□□□□ -0.29
TSPAN3-207ENST00000559494 IGIPA6NJ69 53 aa13.25□□□□□ -0.29
TSPAN3-207ENST00000559494 C1orf196B1AJZ1 125 aa13.25□□□□□ -0.29
TSPAN3-207ENST00000559494 GCSHP23434 173 aa13.25□□□□□ -0.29
TSPAN3-207ENST00000559494 KRTAP10-1P60331 282 aa13.25□□□□□ -0.29
TSPAN3-207ENST00000559494 FA2HQ7L5A8 372 aa13.25□□□□□ -0.29
TSPAN3-207ENST00000559494 URB1-AS1Q96HZ7 61 aa13.25□□□□□ -0.29
TSPAN3-207ENST00000559494 DNAH8Q96JB1 4490 aa13.24□□□□□ -0.29
TSPAN3-207ENST00000559494 G0S2P27469 103 aa13.24□□□□□ -0.29
TSPAN3-207ENST00000559494 CD164L2Q6UWJ8 174 aa13.24□□□□□ -0.29
TSPAN3-207ENST00000559494 TOMM6Q96B49 74 aa13.24□□□□□ -0.29
TSPAN3-207ENST00000559494 TMEM141Q96I45 108 aa13.23□□□□□ -0.29
TSPAN3-207ENST00000559494 RYR1P21817 5038 aa13.23□□□□□ -0.29
TSPAN3-207ENST00000559494 C15orf56Q8N910 161 aa13.22□□□□□ -0.29
TSPAN3-207ENST00000559494 LINC00614P0C842 121 aa13.21□□□□□ -0.29
TSPAN3-207ENST00000559494 ZC2HC1BQ5TFG8 222 aa13.21□□□□□ -0.29
TSPAN3-207ENST00000559494 CFAP161Q6P656 301 aa13.21□□□□□ -0.29
TSPAN3-207ENST00000559494 IFITM10A6NMD0 228 aa13.2□□□□□ -0.3
TSPAN3-207ENST00000559494 NPSP0C0P6 89 aa13.2□□□□□ -0.3
TSPAN3-207ENST00000559494 HSPG2P98160 4391 aa13.2□□□□□ -0.3
TSPAN3-207ENST00000559494 LINC01620Q4KN68 170 aa13.19□□□□□ -0.3
TSPAN3-207ENST00000559494 LINC00173Q6ZV60 143 aa13.19□□□□□ -0.3
TSPAN3-207ENST00000559494 AMELXQ99217 191 aa13.19□□□□□ -0.3
TSPAN3-207ENST00000559494 TIMM17AQ99595 171 aa13.19□□□□□ -0.3
TSPAN3-207ENST00000559494 AP5S1Q9NUS5 200 aa13.19□□□□□ -0.3
TSPAN3-207ENST00000559494 hDV102S1A0JD36 115 aa13.18□□□□□ -0.3
TSPAN3-207ENST00000559494 SLPIP03973 132 aa13.18□□□□□ -0.3
TSPAN3-207ENST00000559494 TEX43Q6ZNM6 134 aa13.18□□□□□ -0.3
TSPAN3-207ENST00000559494 ERASQ7Z444 233 aa13.18□□□□□ -0.3
TSPAN3-207ENST00000559494 SCGB3A1Q96QR1 104 aa13.18□□□□□ -0.3
TSPAN3-207ENST00000559494 VCX2Q9H322 139 aa13.18□□□□□ -0.3
TSPAN3-207ENST00000559494 HERC2O95714 4834 aa13.18□□□□□ -0.3
TSPAN3-207ENST00000559494 A0A096LNJ9 63 aa13.16□□□□□ -0.3
TSPAN3-207ENST00000559494 RAB5BP61020 215 aa13.16□□□□□ -0.3
TSPAN3-207ENST00000559494 HIGD2BQ4VC39 106 aa13.16□□□□□ -0.3
TSPAN3-207ENST00000559494 Q6ZN92 141 aa13.16□□□□□ -0.3
TSPAN3-207ENST00000559494 C5orf38Q86SI9 138 aa13.16□□□□□ -0.3
TSPAN3-207ENST00000559494 IGHV3OR16-9A0A0B4J2B5 98 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms