RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 DGAT2L7PQ6IED9 249 aa14.44□□□□□ -0.1
SNX1-206ENST00000559389 Q6ZUT4 128 aa14.44□□□□□ -0.1
SNX1-206ENST00000559389 CDC42SE2Q9NRR3 84 aa14.44□□□□□ -0.1
SNX1-206ENST00000559389 CYSLTR1Q9Y271 337 aa14.44□□□□□ -0.1
SNX1-206ENST00000559389 COX11Q9Y6N1 276 aa14.44□□□□□ -0.1
SNX1-206ENST00000559389 PSCAO43653 123 aa14.43□□□□□ -0.1
SNX1-206ENST00000559389 C2orf66Q6UXQ4 117 aa14.43□□□□□ -0.1
SNX1-206ENST00000559389 FA2HQ7L5A8 372 aa14.43□□□□□ -0.1
SNX1-206ENST00000559389 ZNF664Q8N3J9 261 aa14.42□□□□□ -0.1
SNX1-206ENST00000559389 TRAV8-4A0A0B4J246 113 aa14.41□□□□□ -0.1
SNX1-206ENST00000559389 URB1-AS1Q96HZ7 61 aa14.41□□□□□ -0.1
SNX1-206ENST00000559389 A0A1B0GVY2 172 aa14.4□□□□□ -0.1
SNX1-206ENST00000559389 MRPS36P82909 103 aaKnown RBP14.4□□□□□ -0.1
SNX1-206ENST00000559389 KRTAP26-1Q6PEX3 210 aa14.4□□□□□ -0.1
SNX1-206ENST00000559389 FAM104AQ969W3 186 aa14.4□□□□□ -0.1
SNX1-206ENST00000559389 PYGO1Q9Y3Y4 419 aa14.4□□□□□ -0.1
SNX1-206ENST00000559389 IGLV10-54A0A075B6I4 117 aa14.39□□□□□ -0.11
SNX1-206ENST00000559389 IGKV3OR2-268A0A0C4DH90 116 aa14.39□□□□□ -0.11
SNX1-206ENST00000559389 G0S2P27469 103 aa14.39□□□□□ -0.11
SNX1-206ENST00000559389 MAPKAPK5-AS1Q8N8E1 139 aa14.39□□□□□ -0.11
SNX1-206ENST00000559389 AP5S1Q9NUS5 200 aa14.39□□□□□ -0.11
SNX1-206ENST00000559389 A0A087WTM6 91 aa14.38□□□□□ -0.11
SNX1-206ENST00000559389 LRCOL1A6NCL2 159 aa14.38□□□□□ -0.11
SNX1-206ENST00000559389 RNASE13Q5GAN3 156 aaKnown RBP14.38□□□□□ -0.11
SNX1-206ENST00000559389 TOMM6Q96B49 74 aa14.38□□□□□ -0.11
SNX1-206ENST00000559389 DNAH2Q9P225 4427 aa14.38□□□□□ -0.11
SNX1-206ENST00000559389 LINC00614P0C842 121 aa14.37□□□□□ -0.11
SNX1-206ENST00000559389 OPRPNQ99935 248 aaPredicted RBP14.37□□□□□ -0.11
SNX1-206ENST00000559389 IGLV4-3A0A075B6K6 122 aa14.36□□□□□ -0.11
SNX1-206ENST00000559389 LINC00959A0A1B0GUT2 108 aa14.36□□□□□ -0.11
SNX1-206ENST00000559389 RAB5BP61020 215 aa14.36□□□□□ -0.11
SNX1-206ENST00000559389 FRAS1Q86XX4 4008 aa14.36□□□□□ -0.11
SNX1-206ENST00000559389 DNAH10Q8IVF4 4471 aa14.35□□□□□ -0.11
SNX1-206ENST00000559389 IGIPA6NJ69 53 aa14.35□□□□□ -0.11
SNX1-206ENST00000559389 NPSP0C0P6 89 aa14.35□□□□□ -0.11
SNX1-206ENST00000559389 WFDC2Q14508 124 aa14.35□□□□□ -0.11
SNX1-206ENST00000559389 A0A096LNJ9 63 aa14.34□□□□□ -0.11
SNX1-206ENST00000559389 LINC01549A6NIU2 74 aa14.34□□□□□ -0.11
SNX1-206ENST00000559389 CHCHD10Q8WYQ3 142 aaPredicted RBP14.34□□□□□ -0.11
SNX1-206ENST00000559389 TMEM141Q96I45 108 aa14.34□□□□□ -0.11
SNX1-206ENST00000559389 BAALCQ8WXS3 180 aa14.33□□□□□ -0.12
SNX1-206ENST00000559389 TIMM17AQ99595 171 aa14.33□□□□□ -0.12
SNX1-206ENST00000559389 SS18Q15532 418 aa14.32□□□□□ -0.12
SNX1-206ENST00000559389 CHCHD1Q96BP2 118 aaKnown RBP14.32□□□□□ -0.12
SNX1-206ENST00000559389 DNAH17Q9UFH2 4485 aa14.32□□□□□ -0.12
SNX1-206ENST00000559389 GAGE12HA6NDE8 117 aa14.31□□□□□ -0.12
SNX1-206ENST00000559389 EREGO14944 169 aa14.31□□□□□ -0.12
SNX1-206ENST00000559389 CCL25O15444 150 aa14.31□□□□□ -0.12
SNX1-206ENST00000559389 ERASQ7Z444 233 aa14.31□□□□□ -0.12
SNX1-206ENST00000559389 TRAV13-1A0A0B4J241 112 aa14.3□□□□□ -0.12
SNX1-206ENST00000559389 IFITM10A6NMD0 228 aa14.3□□□□□ -0.12
SNX1-206ENST00000559389 LECT2O14960 151 aa14.3□□□□□ -0.12
SNX1-206ENST00000559389 HBDP02042 147 aa14.3□□□□□ -0.12
SNX1-206ENST00000559389 Q6ZN92 141 aa14.3□□□□□ -0.12
SNX1-206ENST00000559389 LINC00173Q6ZV60 143 aa14.3□□□□□ -0.12
SNX1-206ENST00000559389 BAGE3Q86Y29 109 aa14.3□□□□□ -0.12
SNX1-206ENST00000559389 SCGB3A1Q96QR1 104 aa14.3□□□□□ -0.12
SNX1-206ENST00000559389 FAT2Q9NYQ8 4349 aa14.29□□□□□ -0.12
SNX1-206ENST00000559389 XCL1P47992 114 aa14.29□□□□□ -0.12
SNX1-206ENST00000559389 FOXI1Q12951 378 aa14.29□□□□□ -0.12
SNX1-206ENST00000559389 PMCHL1Q16048 86 aa14.29□□□□□ -0.12
SNX1-206ENST00000559389 TEX43Q6ZNM6 134 aa14.29□□□□□ -0.12
SNX1-206ENST00000559389 Q8N814 137 aa14.29□□□□□ -0.12
SNX1-206ENST00000559389 AMELXQ99217 191 aa14.29□□□□□ -0.12
SNX1-206ENST00000559389 C1orf196B1AJZ1 125 aa14.28□□□□□ -0.12
SNX1-206ENST00000559389 LINC00310P59036 64 aa14.28□□□□□ -0.12
SNX1-206ENST00000559389 USP17L23D6RBM5 183 aa14.27□□□□□ -0.13
SNX1-206ENST00000559389 PAPPA-AS1Q5QFB9 102 aa14.27□□□□□ -0.13
SNX1-206ENST00000559389 SPATA12Q7Z6I5 190 aa14.27□□□□□ -0.13
SNX1-206ENST00000559389 C2orf88Q9BSF0 95 aa14.27□□□□□ -0.13
SNX1-206ENST00000559389 HIST1H2BKO60814 126 aa14.26□□□□□ -0.13
SNX1-206ENST00000559389 HIST1H2BJP06899 126 aa14.26□□□□□ -0.13
SNX1-206ENST00000559389 HIST1H2BOP23527 126 aa14.26□□□□□ -0.13
SNX1-206ENST00000559389 HIST1H2BBP33778 126 aa14.26□□□□□ -0.13
SNX1-206ENST00000559389 HIST1H2BDP58876 126 aa14.26□□□□□ -0.13
SNX1-206ENST00000559389 KRTAP10-2P60368 255 aa14.26□□□□□ -0.13
SNX1-206ENST00000559389 HIST1H2BCP62807 126 aa14.26□□□□□ -0.13
SNX1-206ENST00000559389 HIST2H2BEQ16778 126 aa14.26□□□□□ -0.13
SNX1-206ENST00000559389 PDZD11Q5EBL8 140 aa14.26□□□□□ -0.13
SNX1-206ENST00000559389 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.26□□□□□ -0.13
SNX1-206ENST00000559389 ZC2HC1BQ5TFG8 222 aa14.26□□□□□ -0.13
SNX1-206ENST00000559389 CD164L2Q6UWJ8 174 aa14.26□□□□□ -0.13
SNX1-206ENST00000559389 HIST1H2BHQ93079 126 aa14.26□□□□□ -0.13
SNX1-206ENST00000559389 HIST1H2BNQ99877 126 aa14.26□□□□□ -0.13
SNX1-206ENST00000559389 HIST1H2BMQ99879 126 aa14.26□□□□□ -0.13
SNX1-206ENST00000559389 HSBP1O75506 76 aa14.25□□□□□ -0.13
SNX1-206ENST00000559389 SERF1AO75920 110 aa14.25□□□□□ -0.13
SNX1-206ENST00000559389 VCX2Q9H322 139 aa14.25□□□□□ -0.13
SNX1-206ENST00000559389 UBE2D1P51668 147 aa14.24□□□□□ -0.13
SNX1-206ENST00000559389 C14orf177Q52M58 125 aa14.24□□□□□ -0.13
SNX1-206ENST00000559389 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.22□□□□□ -0.13
SNX1-206ENST00000559389 CDPF1Q6NVV7 123 aa14.22□□□□□ -0.13
SNX1-206ENST00000559389 C15orf56Q8N910 161 aa14.22□□□□□ -0.13
SNX1-206ENST00000559389 NTN5Q8WTR8 489 aaPredicted RBP14.22□□□□□ -0.13
SNX1-206ENST00000559389 LINC00242Q5T6M2 205 aa14.21□□□□□ -0.13
SNX1-206ENST00000559389 ATP5LO75964 103 aa14.2□□□□□ -0.14
SNX1-206ENST00000559389 FUSP35637 526 aaKnown RBP eCLIP14.2□□□□□ -0.14
SNX1-206ENST00000559389 FAM19A3Q7Z5A8 133 aa14.2□□□□□ -0.14
SNX1-206ENST00000559389 PGPEP1Q9NXJ5 209 aa14.2□□□□□ -0.14
SNX1-206ENST00000559389 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 283.6 ms