RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 SMDT1Q9H4I9 107 aa7.85□□□□□ -1.15
TPM1-216ENST00000558910 VPS13BQ7Z7G8 4022 aa7.84□□□□□ -1.15
TPM1-216ENST00000558910 I3L3M4 83 aa7.84□□□□□ -1.15
TPM1-216ENST00000558910 NDUFS6O75380 124 aaKnown RBP7.84□□□□□ -1.15
TPM1-216ENST00000558910 PRSS1P07477 247 aa7.84□□□□□ -1.15
TPM1-216ENST00000558910 KRTAP3-1Q9BYR8 98 aa7.84□□□□□ -1.15
TPM1-216ENST00000558910 PRR34Q9NV39 138 aa7.84□□□□□ -1.15
TPM1-216ENST00000558910 hDV102S1A0JD36 115 aa7.83□□□□□ -1.16
TPM1-216ENST00000558910 GAGE12HA6NDE8 117 aa7.83□□□□□ -1.16
TPM1-216ENST00000558910 TSHBP01222 138 aa7.83□□□□□ -1.16
TPM1-216ENST00000558910 FGF6P10767 208 aa7.83□□□□□ -1.16
TPM1-216ENST00000558910 MRPL51Q4U2R6 128 aaKnown RBP7.83□□□□□ -1.16
TPM1-216ENST00000558910 C14orf177Q52M58 125 aa7.83□□□□□ -1.16
TPM1-216ENST00000558910 TMEM70Q9BUB7 260 aa7.83□□□□□ -1.16
TPM1-216ENST00000558910 A0A1B0GUV1 79 aa7.82□□□□□ -1.16
TPM1-216ENST00000558910 SMIM27A0A1W2PRY6 76 aa7.82□□□□□ -1.16
TPM1-216ENST00000558910 FAM231BA6NCW3 169 aa7.82□□□□□ -1.16
TPM1-216ENST00000558910 FCER1GP30273 86 aa7.82□□□□□ -1.16
TPM1-216ENST00000558910 KRTAP26-1Q6PEX3 210 aa7.82□□□□□ -1.16
TPM1-216ENST00000558910 MRAP2Q96G30 205 aa7.82□□□□□ -1.16
TPM1-216ENST00000558910 INAFM2P0DMQ5 153 aa7.81□□□□□ -1.16
TPM1-216ENST00000558910 CKS2P33552 79 aa7.81□□□□□ -1.16
TPM1-216ENST00000558910 HIGD2BQ4VC39 106 aa7.81□□□□□ -1.16
TPM1-216ENST00000558910 RNASE13Q5GAN3 156 aaKnown RBP7.81□□□□□ -1.16
TPM1-216ENST00000558910 FAM104BQ5XKR9 115 aa7.81□□□□□ -1.16
TPM1-216ENST00000558910 TMEM101Q96IK0 257 aa7.81□□□□□ -1.16
TPM1-216ENST00000558910 BTF3L4Q96K17 158 aa7.81□□□□□ -1.16
TPM1-216ENST00000558910 TRBV6-5A0A0K0K1A5 114 aa7.8□□□□□ -1.16
TPM1-216ENST00000558910 SCXQ7RTU7 201 aa7.8□□□□□ -1.16
TPM1-216ENST00000558910 OR5A1Q8NGJ0 315 aa7.8□□□□□ -1.16
TPM1-216ENST00000558910 CHCHD10Q8WYQ3 142 aaPredicted RBP7.8□□□□□ -1.16
TPM1-216ENST00000558910 TRAV8-4A0A0B4J246 113 aa7.79□□□□□ -1.16
TPM1-216ENST00000558910 XCL1P47992 114 aa7.79□□□□□ -1.16
TPM1-216ENST00000558910 POLR2KP53803 58 aaKnown RBP7.79□□□□□ -1.16
TPM1-216ENST00000558910 HBBP68871 147 aa7.79□□□□□ -1.16
TPM1-216ENST00000558910 DGAT2L7PQ6IED9 249 aa7.79□□□□□ -1.16
TPM1-216ENST00000558910 NRACQ8N912 160 aa7.79□□□□□ -1.16
TPM1-216ENST00000558910 SRRM2Q9UQ35 2752 aaKnown RBP7.79□□□□□ -1.16
TPM1-216ENST00000558910 C7orf77A4D0Y5 90 aa7.78□□□□□ -1.16
TPM1-216ENST00000558910 D6R8Y8 96 aa7.78□□□□□ -1.16
TPM1-216ENST00000558910 VCYO14598 125 aa7.78□□□□□ -1.16
TPM1-216ENST00000558910 SUMO2P61956 95 aaKnown RBP7.78□□□□□ -1.16
TPM1-216ENST00000558910 DPH3Q96FX2 82 aa7.78□□□□□ -1.16
TPM1-216ENST00000558910 CCL25O15444 150 aa7.77□□□□□ -1.17
TPM1-216ENST00000558910 CLRN3Q8NCR9 226 aa7.77□□□□□ -1.17
TPM1-216ENST00000558910 LINC00526Q96FQ7 95 aa7.77□□□□□ -1.17
TPM1-216ENST00000558910 KIR2DL4Q99706 377 aa7.77□□□□□ -1.17
TPM1-216ENST00000558910 TRBV27A0A0K0K1C4 114 aa7.76□□□□□ -1.17
TPM1-216ENST00000558910 F8W036 122 aa7.76□□□□□ -1.17
TPM1-216ENST00000558910 TCAPO15273 167 aa7.76□□□□□ -1.17
TPM1-216ENST00000558910 TNFRSF6BO95407 300 aa7.76□□□□□ -1.17
TPM1-216ENST00000558910 NPYP01303 97 aa7.76□□□□□ -1.17
TPM1-216ENST00000558910 ESDP10768 282 aa7.76□□□□□ -1.17
TPM1-216ENST00000558910 IFITM2Q01629 132 aa7.76□□□□□ -1.17
TPM1-216ENST00000558910 CLLU1Q5K131 121 aa7.76□□□□□ -1.17
TPM1-216ENST00000558910 CIRBP-AS1Q8TBR5 109 aa7.76□□□□□ -1.17
TPM1-216ENST00000558910 LOC389332A0A1B0GUA5 103 aa7.75□□□□□ -1.17
TPM1-216ENST00000558910 A0A1B0GW15 77 aa7.75□□□□□ -1.17
TPM1-216ENST00000558910 H7C423 109 aa7.75□□□□□ -1.17
TPM1-216ENST00000558910 PPP1R2P9O14990 202 aa7.75□□□□□ -1.17
TPM1-216ENST00000558910 MT-ND4LP03901 98 aa7.75□□□□□ -1.17
TPM1-216ENST00000558910 S100A8P05109 93 aa7.75□□□□□ -1.17
TPM1-216ENST00000558910 RPL39P62891 51 aaKnown RBP7.75□□□□□ -1.17
TPM1-216ENST00000558910 Q6ZSA8 131 aa7.75□□□□□ -1.17
TPM1-216ENST00000558910 CHAC1Q9BUX1 264 aa7.75□□□□□ -1.17
TPM1-216ENST00000558910 FLG2Q5D862 2391 aaPredicted RBP7.74□□□□□ -1.17
TPM1-216ENST00000558910 TRAV13-1A0A0B4J241 112 aa7.74□□□□□ -1.17
TPM1-216ENST00000558910 LINC00959A0A1B0GUT2 108 aa7.74□□□□□ -1.17
TPM1-216ENST00000558910 A0A1B0GXF2 115 aa7.74□□□□□ -1.17
TPM1-216ENST00000558910 PANO1I0J062 215 aa7.74□□□□□ -1.17
TPM1-216ENST00000558910 PPP1R17O96001 155 aa7.74□□□□□ -1.17
TPM1-216ENST00000558910 SLPIP03973 132 aa7.74□□□□□ -1.17
TPM1-216ENST00000558910 CHTF8P0CG12 524 aa7.74□□□□□ -1.17
TPM1-216ENST00000558910 ZNF25P17030 456 aaPredicted RBP7.74□□□□□ -1.17
TPM1-216ENST00000558910 ODF1Q14990 250 aa7.74□□□□□ -1.17
TPM1-216ENST00000558910 SS18Q15532 418 aa7.74□□□□□ -1.17
TPM1-216ENST00000558910 ZNF664Q8N3J9 261 aa7.74□□□□□ -1.17
TPM1-216ENST00000558910 C15orf56Q8N910 161 aa7.74□□□□□ -1.17
TPM1-216ENST00000558910 CDC42SE2Q9NRR3 84 aa7.74□□□□□ -1.17
TPM1-216ENST00000558910 LINC00862A6NCI5 91 aa7.73□□□□□ -1.17
TPM1-216ENST00000558910 FOXI1Q12951 378 aa7.73□□□□□ -1.17
TPM1-216ENST00000558910 CFAP161Q6P656 301 aa7.73□□□□□ -1.17
TPM1-216ENST00000558910 UQCC3Q6UW78 93 aa7.73□□□□□ -1.17
TPM1-216ENST00000558910 TMEM136Q6ZRR5 245 aa7.73□□□□□ -1.17
TPM1-216ENST00000558910 Q6ZUT4 128 aa7.73□□□□□ -1.17
TPM1-216ENST00000558910 C9orf163Q8N9P6 203 aa7.73□□□□□ -1.17
TPM1-216ENST00000558910 PRELID3AQ96N28 172 aa7.73□□□□□ -1.17
TPM1-216ENST00000558910 OPRPNQ99935 248 aaPredicted RBP7.73□□□□□ -1.17
TPM1-216ENST00000558910 IGHV3-64A0A075B6Q5 118 aa7.72□□□□□ -1.17
TPM1-216ENST00000558910 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.72□□□□□ -1.17
TPM1-216ENST00000558910 ZNF561-AS1K7EIQ3 104 aa7.72□□□□□ -1.17
TPM1-216ENST00000558910 ADCYAP1P18509 176 aa7.72□□□□□ -1.17
TPM1-216ENST00000558910 PNRC1Q12796 327 aaPredicted RBP7.72□□□□□ -1.17
TPM1-216ENST00000558910 COMMD7Q86VX2 200 aa7.72□□□□□ -1.17
TPM1-216ENST00000558910 SMIM2Q9BVW6 85 aa7.72□□□□□ -1.17
TPM1-216ENST00000558910 UBE2D4Q9Y2X8 147 aa7.72□□□□□ -1.17
TPM1-216ENST00000558910 MYCBP2O75592 4640 aa7.71□□□□□ -1.17
TPM1-216ENST00000558910 HERC1Q15751 4861 aa7.71□□□□□ -1.17
TPM1-216ENST00000558910 IGKV2-24A0A0C4DH68 120 aa7.71□□□□□ -1.18
TPM1-216ENST00000558910 C5orf38Q86SI9 138 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms