RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 ALKBH7Q9BT30 221 aaPredicted RBP10.28□□□□□ -0.76
LINC01220-201ENST00000558575 MRPL18Q9H0U6 180 aaKnown RBP10.28□□□□□ -0.76
LINC01220-201ENST00000558575 A0A087WTM6 91 aa10.27□□□□□ -0.77
LINC01220-201ENST00000558575 MT-ND6P03923 174 aa10.27□□□□□ -0.77
LINC01220-201ENST00000558575 Q0VG73 95 aa10.27□□□□□ -0.77
LINC01220-201ENST00000558575 FABP9Q0Z7S8 132 aa10.27□□□□□ -0.77
LINC01220-201ENST00000558575 RNASEKQ6P5S7 137 aaKnown RBP10.27□□□□□ -0.77
LINC01220-201ENST00000558575 MRPL52Q86TS9 123 aaKnown RBP10.27□□□□□ -0.77
LINC01220-201ENST00000558575 Q8N8P6 123 aa10.27□□□□□ -0.77
LINC01220-201ENST00000558575 MAP1LC3AQ9H492 121 aa10.27□□□□□ -0.77
LINC01220-201ENST00000558575 SMCO4Q9NRQ5 59 aa10.27□□□□□ -0.77
LINC01220-201ENST00000558575 IGKV2D-24A0A075B6R9 120 aa10.26□□□□□ -0.77
LINC01220-201ENST00000558575 REG3AQ06141 175 aa10.26□□□□□ -0.77
LINC01220-201ENST00000558575 WFDC2Q14508 124 aa10.26□□□□□ -0.77
LINC01220-201ENST00000558575 AMMECR1LQ6DCA0 310 aa10.26□□□□□ -0.77
LINC01220-201ENST00000558575 FAM104AQ969W3 186 aa10.26□□□□□ -0.77
LINC01220-201ENST00000558575 TM2D2Q9BX73 214 aa10.26□□□□□ -0.77
LINC01220-201ENST00000558575 HMCN2Q8NDA2 5059 aa10.25□□□□□ -0.77
LINC01220-201ENST00000558575 IFI27P40305 119 aaPredicted RBP10.25□□□□□ -0.77
LINC01220-201ENST00000558575 RPL39P62891 51 aaKnown RBP10.25□□□□□ -0.77
LINC01220-201ENST00000558575 MIAQ16674 131 aa10.25□□□□□ -0.77
LINC01220-201ENST00000558575 UBE2D4Q9Y2X8 147 aa10.25□□□□□ -0.77
LINC01220-201ENST00000558575 TRAPPC1Q9Y5R8 145 aa10.25□□□□□ -0.77
LINC01220-201ENST00000558575 CRPP02741 224 aa10.24□□□□□ -0.77
LINC01220-201ENST00000558575 ZNF25P17030 456 aaPredicted RBP10.24□□□□□ -0.77
LINC01220-201ENST00000558575 CDC42SE2Q9NRR3 84 aa10.24□□□□□ -0.77
LINC01220-201ENST00000558575 PSCAO43653 123 aa10.23□□□□□ -0.77
LINC01220-201ENST00000558575 XGP55808 180 aa10.23□□□□□ -0.77
LINC01220-201ENST00000558575 BAALCQ8WXS3 180 aa10.23□□□□□ -0.77
LINC01220-201ENST00000558575 RMI2Q96E14 147 aa10.23□□□□□ -0.77
LINC01220-201ENST00000558575 CSDC2Q9Y534 153 aaKnown RBP10.23□□□□□ -0.77
LINC01220-201ENST00000558575 IGLV10-54A0A075B6I4 117 aa10.22□□□□□ -0.77
LINC01220-201ENST00000558575 RAB5AP20339 215 aa10.22□□□□□ -0.77
LINC01220-201ENST00000558575 FUSP35637 526 aaKnown RBP eCLIP10.22□□□□□ -0.77
LINC01220-201ENST00000558575 ZNF664Q8N3J9 261 aa10.22□□□□□ -0.77
LINC01220-201ENST00000558575 OR5A1Q8NGJ0 315 aa10.22□□□□□ -0.77
LINC01220-201ENST00000558575 TIMM21Q9BVV7 248 aa10.22□□□□□ -0.77
LINC01220-201ENST00000558575 C1orf43Q9BWL3 253 aa10.22□□□□□ -0.77
LINC01220-201ENST00000558575 COX11Q9Y6N1 276 aa10.22□□□□□ -0.77
LINC01220-201ENST00000558575 TMEM101Q96IK0 257 aa10.21□□□□□ -0.77
LINC01220-201ENST00000558575 OPRPNQ99935 248 aaPredicted RBP10.21□□□□□ -0.77
LINC01220-201ENST00000558575 NXT2Q9NPJ8 142 aaKnown RBP10.21□□□□□ -0.77
LINC01220-201ENST00000558575 TRAV8-4A0A0B4J246 113 aa10.2□□□□□ -0.78
LINC01220-201ENST00000558575 IGKV3OR2-268A0A0C4DH90 116 aa10.2□□□□□ -0.78
LINC01220-201ENST00000558575 LINC01546A6NGU7 62 aa10.2□□□□□ -0.78
LINC01220-201ENST00000558575 COLCA2A8K830 154 aa10.2□□□□□ -0.78
LINC01220-201ENST00000558575 J3QL48 77 aa10.2□□□□□ -0.78
LINC01220-201ENST00000558575 LECT2O14960 151 aa10.2□□□□□ -0.78
LINC01220-201ENST00000558575 SCO1O75880 301 aa10.2□□□□□ -0.78
LINC01220-201ENST00000558575 RNASE13Q5GAN3 156 aaKnown RBP10.19□□□□□ -0.78
LINC01220-201ENST00000558575 DGAT2L7PQ6IED9 249 aa10.19□□□□□ -0.78
LINC01220-201ENST00000558575 Q6ZUT4 128 aa10.19□□□□□ -0.78
LINC01220-201ENST00000558575 TMEM18Q96B42 140 aa10.19□□□□□ -0.78
LINC01220-201ENST00000558575 URB1-AS1Q96HZ7 61 aa10.19□□□□□ -0.78
LINC01220-201ENST00000558575 LINC00959A0A1B0GUT2 108 aa10.18□□□□□ -0.78
LINC01220-201ENST00000558575 K7EMI3 77 aa10.18□□□□□ -0.78
LINC01220-201ENST00000558575 PRSS3P2Q8NHM4 247 aa10.18□□□□□ -0.78
LINC01220-201ENST00000558575 C18orf32Q8TCD1 76 aa10.18□□□□□ -0.78
LINC01220-201ENST00000558575 ORMDL2Q53FV1 153 aa10.17□□□□□ -0.78
LINC01220-201ENST00000558575 C2orf66Q6UXQ4 117 aa10.17□□□□□ -0.78
LINC01220-201ENST00000558575 Q8N814 137 aa10.17□□□□□ -0.78
LINC01220-201ENST00000558575 CHCHD10Q8WYQ3 142 aaPredicted RBP10.17□□□□□ -0.78
LINC01220-201ENST00000558575 SPANXA1Q9NS26 97 aa10.17□□□□□ -0.78
LINC01220-201ENST00000558575 PYGO1Q9Y3Y4 419 aa10.17□□□□□ -0.78
LINC01220-201ENST00000558575 GAGE12HA6NDE8 117 aa10.16□□□□□ -0.78
LINC01220-201ENST00000558575 EREGO14944 169 aa10.16□□□□□ -0.78
LINC01220-201ENST00000558575 MRPS36P82909 103 aaKnown RBP10.16□□□□□ -0.78
LINC01220-201ENST00000558575 SMAGPQ0VAQ4 97 aa10.16□□□□□ -0.78
LINC01220-201ENST00000558575 PGPEP1Q9NXJ5 209 aa10.16□□□□□ -0.78
LINC01220-201ENST00000558575 IGIPA6NJ69 53 aa10.15□□□□□ -0.78
LINC01220-201ENST00000558575 CYSLTR1Q9Y271 337 aa10.15□□□□□ -0.78
LINC01220-201ENST00000558575 IGLV4-3A0A075B6K6 122 aa10.14□□□□□ -0.79
LINC01220-201ENST00000558575 USP17L23D6RBM5 183 aa10.14□□□□□ -0.79
LINC01220-201ENST00000558575 SMR3BP02814 79 aaPredicted RBP10.14□□□□□ -0.79
LINC01220-201ENST00000558575 TRGC2P03986 189 aa10.14□□□□□ -0.79
LINC01220-201ENST00000558575 FOXI1Q12951 378 aa10.14□□□□□ -0.79
LINC01220-201ENST00000558575 CCL25O15444 150 aa10.13□□□□□ -0.79
LINC01220-201ENST00000558575 ZC2HC1BQ5TFG8 222 aa10.13□□□□□ -0.79
LINC01220-201ENST00000558575 TOMM6Q96B49 74 aa10.13□□□□□ -0.79
LINC01220-201ENST00000558575 TRAV13-1A0A0B4J241 112 aa10.12□□□□□ -0.79
LINC01220-201ENST00000558575 PRSS1P07477 247 aa10.12□□□□□ -0.79
LINC01220-201ENST00000558575 LINC00614P0C842 121 aa10.12□□□□□ -0.79
LINC01220-201ENST00000558575 XCL1P47992 114 aa10.12□□□□□ -0.79
LINC01220-201ENST00000558575 SS18Q15532 418 aa10.12□□□□□ -0.79
LINC01220-201ENST00000558575 FA2HQ7L5A8 372 aa10.12□□□□□ -0.79
LINC01220-201ENST00000558575 NTN5Q8WTR8 489 aaPredicted RBP10.12□□□□□ -0.79
LINC01220-201ENST00000558575 A0A096LNJ9 63 aa10.11□□□□□ -0.79
LINC01220-201ENST00000558575 LINC00173Q6ZV60 143 aa10.11□□□□□ -0.79
LINC01220-201ENST00000558575 DNAH8Q96JB1 4490 aa10.1□□□□□ -0.79
LINC01220-201ENST00000558575 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.1□□□□□ -0.79
LINC01220-201ENST00000558575 C1orf196B1AJZ1 125 aa10.1□□□□□ -0.79
LINC01220-201ENST00000558575 CD164L2Q6UWJ8 174 aa10.1□□□□□ -0.79
LINC01220-201ENST00000558575 C15orf56Q8N910 161 aa10.1□□□□□ -0.79
LINC01220-201ENST00000558575 TMEM141Q96I45 108 aa10.1□□□□□ -0.79
LINC01220-201ENST00000558575 AMELXQ99217 191 aa10.1□□□□□ -0.79
LINC01220-201ENST00000558575 ATP6V1G1O75348 118 aa10.09□□□□□ -0.79
LINC01220-201ENST00000558575 G0S2P27469 103 aa10.09□□□□□ -0.79
LINC01220-201ENST00000558575 KRTAP10-1P60331 282 aa10.09□□□□□ -0.79
LINC01220-201ENST00000558575 CDPF1Q6NVV7 123 aa10.09□□□□□ -0.79
LINC01220-201ENST00000558575 AP5S1Q9NUS5 200 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms