RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 PRR34Q9NV39 138 aa7.04□□□□□ -1.28
LRRC28-204ENST00000558172 CYSLTR1Q9Y271 337 aa7.04□□□□□ -1.28
LRRC28-204ENST00000558172 UBE2D4Q9Y2X8 147 aa7.04□□□□□ -1.28
LRRC28-204ENST00000558172 TRAV8-4A0A0B4J246 113 aa7.03□□□□□ -1.28
LRRC28-204ENST00000558172 RPL39P62891 51 aaKnown RBP7.03□□□□□ -1.28
LRRC28-204ENST00000558172 REG3AQ06141 175 aa7.03□□□□□ -1.28
LRRC28-204ENST00000558172 ENHOQ6UWT2 76 aa7.03□□□□□ -1.28
LRRC28-204ENST00000558172 C2orf66Q6UXQ4 117 aa7.03□□□□□ -1.28
LRRC28-204ENST00000558172 LINC00336Q6ZUF6 198 aa7.03□□□□□ -1.28
LRRC28-204ENST00000558172 ZNF664Q8N3J9 261 aa7.03□□□□□ -1.28
LRRC28-204ENST00000558172 Q9HAA7 133 aa7.03□□□□□ -1.28
LRRC28-204ENST00000558172 AP5S1Q9NUS5 200 aa7.03□□□□□ -1.28
LRRC28-204ENST00000558172 PYGO1Q9Y3Y4 419 aa7.03□□□□□ -1.28
LRRC28-204ENST00000558172 FRAS1Q86XX4 4008 aa7.03□□□□□ -1.28
LRRC28-204ENST00000558172 NPSP0C0P6 89 aa7.02□□□□□ -1.29
LRRC28-204ENST00000558172 MRPS36P82909 103 aaKnown RBP7.02□□□□□ -1.29
LRRC28-204ENST00000558172 CHCHD1Q96BP2 118 aaKnown RBP7.02□□□□□ -1.29
LRRC28-204ENST00000558172 RTL8CO15255 209 aa7.01□□□□□ -1.29
LRRC28-204ENST00000558172 CCL25O15444 150 aa7.01□□□□□ -1.29
LRRC28-204ENST00000558172 PSCAO43653 123 aa7.01□□□□□ -1.29
LRRC28-204ENST00000558172 Q6ZRN7 208 aaPredicted RBP7.01□□□□□ -1.29
LRRC28-204ENST00000558172 BAGE3Q86Y29 109 aa7.01□□□□□ -1.29
LRRC28-204ENST00000558172 TOMM6Q96B49 74 aa7.01□□□□□ -1.29
LRRC28-204ENST00000558172 URB1-AS1Q96HZ7 61 aa7.01□□□□□ -1.29
LRRC28-204ENST00000558172 C1orf43Q9BWL3 253 aa7.01□□□□□ -1.29
LRRC28-204ENST00000558172 IGKV2D-24A0A075B6R9 120 aa7□□□□□ -1.29
LRRC28-204ENST00000558172 PAPPA-AS1Q5QFB9 102 aa7□□□□□ -1.29
LRRC28-204ENST00000558172 CLPSL2Q6UWE3 100 aa7□□□□□ -1.29
LRRC28-204ENST00000558172 HBDP02042 147 aa6.99□□□□□ -1.29
LRRC28-204ENST00000558172 SS18Q15532 418 aa6.99□□□□□ -1.29
LRRC28-204ENST00000558172 Q6ZN92 141 aa6.99□□□□□ -1.29
LRRC28-204ENST00000558172 ERASQ7Z444 233 aa6.99□□□□□ -1.29
LRRC28-204ENST00000558172 TMEM141Q96I45 108 aa6.99□□□□□ -1.29
LRRC28-204ENST00000558172 TIMM17AQ99595 171 aa6.99□□□□□ -1.29
LRRC28-204ENST00000558172 FAT2Q9NYQ8 4349 aa6.99□□□□□ -1.29
LRRC28-204ENST00000558172 IGLV4-3A0A075B6K6 122 aa6.98□□□□□ -1.29
LRRC28-204ENST00000558172 IGKV3OR2-268A0A0C4DH90 116 aa6.98□□□□□ -1.29
LRRC28-204ENST00000558172 PRSS29PA6NIE9 313 aa6.98□□□□□ -1.29
LRRC28-204ENST00000558172 IGIPA6NJ69 53 aa6.98□□□□□ -1.29
LRRC28-204ENST00000558172 HSBP1O75506 76 aa6.98□□□□□ -1.29
LRRC28-204ENST00000558172 Q6ZUT4 128 aa6.98□□□□□ -1.29
LRRC28-204ENST00000558172 SCGB3A1Q96QR1 104 aa6.98□□□□□ -1.29
LRRC28-204ENST00000558172 LINC00959A0A1B0GUT2 108 aa6.97□□□□□ -1.29
LRRC28-204ENST00000558172 C1orf196B1AJZ1 125 aa6.97□□□□□ -1.29
LRRC28-204ENST00000558172 EREGO14944 169 aa6.97□□□□□ -1.29
LRRC28-204ENST00000558172 HIST1H2BKO60814 126 aa6.97□□□□□ -1.29
LRRC28-204ENST00000558172 HIST1H2BJP06899 126 aa6.97□□□□□ -1.29
LRRC28-204ENST00000558172 HIST1H2BOP23527 126 aa6.97□□□□□ -1.29
LRRC28-204ENST00000558172 HIST1H2BBP33778 126 aa6.97□□□□□ -1.29
LRRC28-204ENST00000558172 HIST1H2BDP58876 126 aa6.97□□□□□ -1.29
LRRC28-204ENST00000558172 HIST1H2BCP62807 126 aa6.97□□□□□ -1.29
LRRC28-204ENST00000558172 HIST2H2BEQ16778 126 aa6.97□□□□□ -1.29
LRRC28-204ENST00000558172 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.97□□□□□ -1.29
LRRC28-204ENST00000558172 TEX43Q6ZNM6 134 aa6.97□□□□□ -1.29
LRRC28-204ENST00000558172 HIST1H2BHQ93079 126 aa6.97□□□□□ -1.29
LRRC28-204ENST00000558172 FAM104AQ969W3 186 aa6.97□□□□□ -1.29
LRRC28-204ENST00000558172 HIST1H2BNQ99877 126 aa6.97□□□□□ -1.29
LRRC28-204ENST00000558172 HIST1H2BMQ99879 126 aa6.97□□□□□ -1.29
LRRC28-204ENST00000558172 OPRPNQ99935 248 aaPredicted RBP6.97□□□□□ -1.29
LRRC28-204ENST00000558172 C2orf88Q9BSF0 95 aa6.97□□□□□ -1.29
LRRC28-204ENST00000558172 VCX2Q9H322 139 aa6.97□□□□□ -1.29
LRRC28-204ENST00000558172 IGLV10-54A0A075B6I4 117 aa6.96□□□□□ -1.3
LRRC28-204ENST00000558172 A0A096LNJ9 63 aa6.96□□□□□ -1.3
LRRC28-204ENST00000558172 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.96□□□□□ -1.3
LRRC28-204ENST00000558172 TNP2Q05952 138 aa6.96□□□□□ -1.3
LRRC28-204ENST00000558172 RNASE13Q5GAN3 156 aaKnown RBP6.96□□□□□ -1.3
LRRC28-204ENST00000558172 KRTAP26-1Q6PEX3 210 aa6.96□□□□□ -1.3
LRRC28-204ENST00000558172 CHCHD10Q8WYQ3 142 aaPredicted RBP6.96□□□□□ -1.3
LRRC28-204ENST00000558172 AMELXQ99217 191 aa6.96□□□□□ -1.3
LRRC28-204ENST00000558172 TRAV13-1A0A0B4J241 112 aa6.95□□□□□ -1.3
LRRC28-204ENST00000558172 IFITM10A6NMD0 228 aa6.95□□□□□ -1.3
LRRC28-204ENST00000558172 SERF1AO75920 110 aa6.95□□□□□ -1.3
LRRC28-204ENST00000558172 ATP5LO75964 103 aa6.95□□□□□ -1.3
LRRC28-204ENST00000558172 PDZD11Q5EBL8 140 aa6.95□□□□□ -1.3
LRRC28-204ENST00000558172 A0A087WTM6 91 aa6.94□□□□□ -1.3
LRRC28-204ENST00000558172 LRCOL1A6NCL2 159 aa6.94□□□□□ -1.3
LRRC28-204ENST00000558172 GAGE12HA6NDE8 117 aa6.94□□□□□ -1.3
LRRC28-204ENST00000558172 PMCHL1Q16048 86 aa6.94□□□□□ -1.3
LRRC28-204ENST00000558172 CD164L2Q6UWJ8 174 aa6.94□□□□□ -1.3
LRRC28-204ENST00000558172 MAPKAPK5-AS1Q8N8E1 139 aa6.94□□□□□ -1.3
LRRC28-204ENST00000558172 PKD1P98161 4303 aa6.94□□□□□ -1.3
LRRC28-204ENST00000558172 DNAH11Q96DT5 4516 aa6.94□□□□□ -1.3
LRRC28-204ENST00000558172 XCL1P47992 114 aa6.93□□□□□ -1.3
LRRC28-204ENST00000558172 LINC00310P59036 64 aa6.93□□□□□ -1.3
LRRC28-204ENST00000558172 SEC11AP67812 179 aa6.93□□□□□ -1.3
LRRC28-204ENST00000558172 C14orf177Q52M58 125 aa6.93□□□□□ -1.3
LRRC28-204ENST00000558172 CFAP161Q6P656 301 aa6.93□□□□□ -1.3
LRRC28-204ENST00000558172 BAALCQ8WXS3 180 aa6.93□□□□□ -1.3
LRRC28-204ENST00000558172 UBE2D1P51668 147 aa6.92□□□□□ -1.3
LRRC28-204ENST00000558172 FOXI1Q12951 378 aa6.92□□□□□ -1.3
LRRC28-204ENST00000558172 PMVKQ15126 192 aa6.92□□□□□ -1.3
LRRC28-204ENST00000558172 COA6Q5JTJ3 125 aaKnown RBP6.92□□□□□ -1.3
LRRC28-204ENST00000558172 LINC00173Q6ZV60 143 aa6.92□□□□□ -1.3
LRRC28-204ENST00000558172 FAM19A3Q7Z5A8 133 aa6.92□□□□□ -1.3
LRRC28-204ENST00000558172 FAM19A2Q8N3H0 131 aa6.92□□□□□ -1.3
LRRC28-204ENST00000558172 A0A1B0GVY2 172 aa6.91□□□□□ -1.3
LRRC28-204ENST00000558172 NUPR1O60356 82 aa6.91□□□□□ -1.3
LRRC28-204ENST00000558172 LEPROTL1O95214 131 aa6.91□□□□□ -1.3
LRRC28-204ENST00000558172 LINC00242Q5T6M2 205 aa6.91□□□□□ -1.3
LRRC28-204ENST00000558172 Q8N814 137 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms