RNA–Protein interactions for RNA: ENST00000558139.1

LHX4-202, Transcript of LIM homeobox 4, humanhuman

TSL 3

Gene LHX4, Length 721 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4-202ENST00000558139 SPAG11BQ08648 103 aa10.06□□□□□ -0.8
LHX4-202ENST00000558139 GAGE2EQ4V326 116 aa10.06□□□□□ -0.8
LHX4-202ENST00000558139 LCE2CQ5TA81 110 aa10.06□□□□□ -0.8
LHX4-202ENST00000558139 BAGE2Q86Y30 109 aa10.06□□□□□ -0.8
LHX4-202ENST00000558139 CDC42SE2Q9NRR3 84 aa10.06□□□□□ -0.8
LHX4-202ENST00000558139 GAGE2DQ9UEU5 116 aa10.06□□□□□ -0.8
LHX4-202ENST00000558139 TLX1NBP0CAT3 122 aa10.05□□□□□ -0.8
LHX4-202ENST00000558139 FHITP49789 147 aa10.05□□□□□ -0.8
LHX4-202ENST00000558139 CST9LP1Q5W188 147 aa10.05□□□□□ -0.8
LHX4-202ENST00000558139 NUPR1O60356 82 aa10.04□□□□□ -0.8
LHX4-202ENST00000558139 ZNF726P1Q15940 193 aa10.04□□□□□ -0.8
LHX4-202ENST00000558139 F8WDY8 70 aa10.03□□□□□ -0.8
LHX4-202ENST00000558139 IGLC6P0CF74 106 aa10.03□□□□□ -0.8
LHX4-202ENST00000558139 MT1HP80294 61 aa10.03□□□□□ -0.8
LHX4-202ENST00000558139 TMEM241Q24JQ0 296 aa10.03□□□□□ -0.8
LHX4-202ENST00000558139 INMT-MINDY4F8WBC2 141 aa10.02□□□□□ -0.81
LHX4-202ENST00000558139 LORP23490 312 aaPredicted RBP10.02□□□□□ -0.81
LHX4-202ENST00000558139 RPL28P46779 137 aaKnown RBP10.02□□□□□ -0.81
LHX4-202ENST00000558139 KRTAP13-2Q52LG2 175 aa10.02□□□□□ -0.81
LHX4-202ENST00000558139 MZT2BQ6NZ67 158 aa10.02□□□□□ -0.81
LHX4-202ENST00000558139 C5orf38Q86SI9 138 aa10.02□□□□□ -0.81
LHX4-202ENST00000558139 GATD1Q8NB37 220 aa10.02□□□□□ -0.81
LHX4-202ENST00000558139 CTDSP1Q9GZU7 261 aa10.02□□□□□ -0.81
LHX4-202ENST00000558139 ANAPC11Q9NYG5 84 aa10.02□□□□□ -0.81
LHX4-202ENST00000558139 F2Z2F3 143 aa10.01□□□□□ -0.81
LHX4-202ENST00000558139 NDUFA1O15239 70 aa10.01□□□□□ -0.81
LHX4-202ENST00000558139 OR10D4PQ8NGN7 298 aa10.01□□□□□ -0.81
LHX4-202ENST00000558139 SMDT1Q9H4I9 107 aa10.01□□□□□ -0.81
LHX4-202ENST00000558139 ALG5Q9Y673 324 aa10.01□□□□□ -0.81
LHX4-202ENST00000558139 RPS20P60866 119 aaKnown RBP10□□□□□ -0.81
LHX4-202ENST00000558139 MRAP2Q96G30 205 aa10□□□□□ -0.81
LHX4-202ENST00000558139 SDHAF1A6NFY7 115 aa9.99□□□□□ -0.81
LHX4-202ENST00000558139 I3L3M4 83 aa9.99□□□□□ -0.81
LHX4-202ENST00000558139 PMCHP20382 165 aa9.99□□□□□ -0.81
LHX4-202ENST00000558139 FP248Q71RG6 208 aaPredicted RBP9.99□□□□□ -0.81
LHX4-202ENST00000558139 MRPL52Q86TS9 123 aaKnown RBP9.99□□□□□ -0.81
LHX4-202ENST00000558139 RPL39LQ96EH5 51 aaKnown RBP9.99□□□□□ -0.81
LHX4-202ENST00000558139 KRTAP10-6P60371 365 aaPredicted RBP9.98□□□□□ -0.81
LHX4-202ENST00000558139 KRTAP13-3Q3SY46 172 aa9.97□□□□□ -0.81
LHX4-202ENST00000558139 C10orf25Q5T742 122 aa9.97□□□□□ -0.81
LHX4-202ENST00000558139 TRAV13-1A0A0B4J241 112 aa9.96□□□□□ -0.82
LHX4-202ENST00000558139 FAM229BQ4G0N7 80 aa9.96□□□□□ -0.82
LHX4-202ENST00000558139 LYZL1Q6UWQ5 148 aa9.96□□□□□ -0.82
LHX4-202ENST00000558139 C6orf48Q9UBA6 75 aa9.96□□□□□ -0.82
LHX4-202ENST00000558139 IGKV2D-26A0A0A0MRZ7 120 aa9.95□□□□□ -0.82
LHX4-202ENST00000558139 XKRY2A2RUG3 117 aa9.95□□□□□ -0.82
LHX4-202ENST00000558139 DEFA1P59665 94 aa9.95□□□□□ -0.82
LHX4-202ENST00000558139 UNQ6190/PRO20217Q6UXQ8 127 aa9.95□□□□□ -0.82
LHX4-202ENST00000558139 ORAOV1Q8WV07 137 aa9.95□□□□□ -0.82
LHX4-202ENST00000558139 MAP1LC3B2A6NCE7 125 aa9.94□□□□□ -0.82
LHX4-202ENST00000558139 LINC00242Q5T6M2 205 aa9.94□□□□□ -0.82
LHX4-202ENST00000558139 TEX261Q6UWH6 196 aa9.94□□□□□ -0.82
LHX4-202ENST00000558139 FAM210AQ96ND0 272 aa9.94□□□□□ -0.82
LHX4-202ENST00000558139 MAP1LC3BQ9GZQ8 125 aa9.94□□□□□ -0.82
LHX4-202ENST00000558139 BATF3Q9NR55 127 aa9.94□□□□□ -0.82
LHX4-202ENST00000558139 SCO2A0A1W2PP80 73 aa9.93□□□□□ -0.82
LHX4-202ENST00000558139 SSNA1O43805 119 aa9.93□□□□□ -0.82
LHX4-202ENST00000558139 BCE1O60756 84 aa9.93□□□□□ -0.82
LHX4-202ENST00000558139 PAGE4O60829 102 aa9.93□□□□□ -0.82
LHX4-202ENST00000558139 TWIST1Q15672 202 aa9.93□□□□□ -0.82
LHX4-202ENST00000558139 LBHQ53QV2 105 aaPredicted RBP9.93□□□□□ -0.82
LHX4-202ENST00000558139 AKR1C8PQ5T2L2 129 aa9.93□□□□□ -0.82
LHX4-202ENST00000558139 CTRLP40313 264 aa9.92□□□□□ -0.82
LHX4-202ENST00000558139 C9orf129Q5T035 196 aaKnown RBP9.92□□□□□ -0.82
LHX4-202ENST00000558139 CYTL1Q9NRR1 136 aa9.92□□□□□ -0.82
LHX4-202ENST00000558139 IFNA1P01562 189 aa9.91□□□□□ -0.82
LHX4-202ENST00000558139 KRTAP19-2Q3LHN2 52 aa9.91□□□□□ -0.82
LHX4-202ENST00000558139 TMUB2Q71RG4 321 aa9.91□□□□□ -0.82
LHX4-202ENST00000558139 ENKURQ8TC29 256 aa9.91□□□□□ -0.82
LHX4-202ENST00000558139 TMEM242Q9NWH2 141 aa9.91□□□□□ -0.82
LHX4-202ENST00000558139 C7orf77A4D0Y5 90 aa9.9□□□□□ -0.82
LHX4-202ENST00000558139 C9orf62Q8N4C0 152 aa9.9□□□□□ -0.82
LHX4-202ENST00000558139 NDUFA13Q9P0J0 144 aa9.9□□□□□ -0.82
LHX4-202ENST00000558139 C22orf24Q9Y442 160 aa9.9□□□□□ -0.82
LHX4-202ENST00000558139 NDUFC2-KCTD14E9PQ53 114 aa9.89□□□□□ -0.83
LHX4-202ENST00000558139 PFDN1O60925 122 aa9.89□□□□□ -0.83
LHX4-202ENST00000558139 RNASE13Q5GAN3 156 aaKnown RBP9.89□□□□□ -0.83
LHX4-202ENST00000558139 CSDC2Q9Y534 153 aaKnown RBP9.89□□□□□ -0.83
LHX4-202ENST00000558139 BORCS7-ASMTA0A0B4J1R7 106 aa9.88□□□□□ -0.83
LHX4-202ENST00000558139 A0A1B0GVG6 124 aa9.88□□□□□ -0.83
LHX4-202ENST00000558139 SMAGPQ0VAQ4 97 aa9.88□□□□□ -0.83
LHX4-202ENST00000558139 SMIM15Q7Z3B0 74 aa9.88□□□□□ -0.83
LHX4-202ENST00000558139 TRBV6-5A0A0K0K1A5 114 aa9.87□□□□□ -0.83
LHX4-202ENST00000558139 RPL7L1Q6DKI1 246 aaKnown RBP9.87□□□□□ -0.83
LHX4-202ENST00000558139 SPAG11AQ6PDA7 123 aa9.87□□□□□ -0.83
LHX4-202ENST00000558139 RPL35P42766 123 aaKnown RBP9.86□□□□□ -0.83
LHX4-202ENST00000558139 ST20Q9HBF5 79 aa9.86□□□□□ -0.83
LHX4-202ENST00000558139 TRBV30A0A0K0K1B3 111 aa9.85□□□□□ -0.83
LHX4-202ENST00000558139 CNFNQ9BYD5 112 aa9.85□□□□□ -0.83
LHX4-202ENST00000558139 RNASE7Q9H1E1 156 aaKnown RBP9.85□□□□□ -0.83
LHX4-202ENST00000558139 M0R2T5 61 aa9.84□□□□□ -0.83
LHX4-202ENST00000558139 PACRGQ96M98 296 aaPredicted RBP9.84□□□□□ -0.83
LHX4-202ENST00000558139 UBE2D4Q9Y2X8 147 aa9.83□□□□□ -0.84
LHX4-202ENST00000558139 IGHV3OR16-9A0A0B4J2B5 98 aa9.82□□□□□ -0.84
LHX4-202ENST00000558139 FOXA3P55318 350 aaPredicted RBP9.82□□□□□ -0.84
LHX4-202ENST00000558139 TRBV27A0A0K0K1C4 114 aa9.81□□□□□ -0.84
LHX4-202ENST00000558139 UBE2AP49459 152 aa9.81□□□□□ -0.84
LHX4-202ENST00000558139 CENPWQ5EE01 88 aa9.81□□□□□ -0.84
LHX4-202ENST00000558139 MRPL55Q7Z7F7 128 aaKnown RBP9.81□□□□□ -0.84
LHX4-202ENST00000558139 POLR2KP53803 58 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms