RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.31□□□□□ -1.88
RTF1-204ENST00000558117 IGKV1OR2-108A0A075B7D4 117 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 TRAV5A0A0B4J249 113 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 A0A1B0GV72 72 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 OR2T8A6NH00 312 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 I3L2K1 104 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 K7EP13 123 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 APCSP02743 223 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 NMBP08949 121 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 SEC11BP0C7V7 166 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 ZNF688P0C7X2 276 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 LINC00869P0C866 280 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 PSMB3P49720 205 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 EIF5AP63241 154 aaKnown RBP3.31□□□□□ -1.88
RTF1-204ENST00000558117 RRN3P1Q2M238 152 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 Q56UQ5 140 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 AKR1C8PQ5T2L2 129 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 TMEM144Q7Z5S9 345 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 SFT2D1Q8WV19 159 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 SFRP2Q96HF1 295 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 NPCDR1Q9BY65 106 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 NPVFQ9HCQ7 196 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 RPRMQ9NS64 109 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 PXMP4Q9Y6I8 212 aa3.31□□□□□ -1.88
RTF1-204ENST00000558117 IGKV1D-37A0A075B6S9 117 aa3.3□□□□□ -1.88
RTF1-204ENST00000558117 A0A096LPF7 62 aa3.3□□□□□ -1.88
RTF1-204ENST00000558117 C17orf112F2Z3M2 114 aa3.3□□□□□ -1.88
RTF1-204ENST00000558117 H3BMM0 161 aa3.3□□□□□ -1.88
RTF1-204ENST00000558117 H3BNG1 76 aa3.3□□□□□ -1.88
RTF1-204ENST00000558117 K7EIM0 57 aa3.3□□□□□ -1.88
RTF1-204ENST00000558117 ORM2P19652 201 aa3.3□□□□□ -1.88
RTF1-204ENST00000558117 TMEM241Q24JQ0 296 aa3.3□□□□□ -1.88
RTF1-204ENST00000558117 CLLU1Q5K131 121 aa3.3□□□□□ -1.88
RTF1-204ENST00000558117 EIF5AL1Q6IS14 154 aaKnown RBP3.3□□□□□ -1.88
RTF1-204ENST00000558117 CYP2G1PQ6ZSU1 146 aa3.3□□□□□ -1.88
RTF1-204ENST00000558117 ATP5L2Q7Z4Y8 100 aa3.3□□□□□ -1.88
RTF1-204ENST00000558117 TMEM256Q8N2U0 113 aa3.3□□□□□ -1.88
RTF1-204ENST00000558117 LINC00477Q96M19 166 aa3.3□□□□□ -1.88
RTF1-204ENST00000558117 PBDC1Q9BVG4 233 aa3.3□□□□□ -1.88
RTF1-204ENST00000558117 EIF5A2Q9GZV4 153 aaKnown RBP3.3□□□□□ -1.88
RTF1-204ENST00000558117 SLC39A9Q9NUM3 307 aa3.3□□□□□ -1.88
RTF1-204ENST00000558117 PKIGQ9Y2B9 76 aa3.3□□□□□ -1.88
RTF1-204ENST00000558117 LY96Q9Y6Y9 160 aa3.3□□□□□ -1.88
RTF1-204ENST00000558117 KMT2DO14686 5537 aa3.29□□□□□ -1.88
RTF1-204ENST00000558117 LINC00862A6NCI5 91 aa3.29□□□□□ -1.88
RTF1-204ENST00000558117 GNG7O60262 68 aa3.29□□□□□ -1.88
RTF1-204ENST00000558117 SCO1O75880 301 aa3.29□□□□□ -1.88
RTF1-204ENST00000558117 IGKV1-17P01599 117 aa3.29□□□□□ -1.88
RTF1-204ENST00000558117 PRM2P04554 102 aa3.29□□□□□ -1.88
RTF1-204ENST00000558117 FXYD7P58549 80 aa3.29□□□□□ -1.88
RTF1-204ENST00000558117 PATE2Q6UY27 113 aa3.29□□□□□ -1.88
RTF1-204ENST00000558117 MIR17HGQ75NE6 70 aa3.29□□□□□ -1.88
RTF1-204ENST00000558117 LINC00467Q9BRT7 94 aa3.29□□□□□ -1.88
RTF1-204ENST00000558117 GGACTQ9BVM4 153 aa3.29□□□□□ -1.88
RTF1-204ENST00000558117 GTSF1LQ9H1H1 148 aa3.29□□□□□ -1.88
RTF1-204ENST00000558117 C21orf62Q9NYP8 219 aa3.29□□□□□ -1.88
RTF1-204ENST00000558117 RABAC1Q9UI14 185 aa3.29□□□□□ -1.88
RTF1-204ENST00000558117 TRAV8-1A0A0A6YYK1 113 aa3.28□□□□□ -1.88
RTF1-204ENST00000558117 MAP1LC3B2A6NCE7 125 aa3.28□□□□□ -1.88
RTF1-204ENST00000558117 UMAD1C9J7I0 102 aa3.28□□□□□ -1.88
RTF1-204ENST00000558117 CYB5BO43169 146 aa3.28□□□□□ -1.88
RTF1-204ENST00000558117 IFNA1P01562 189 aa3.28□□□□□ -1.88
RTF1-204ENST00000558117 HLA-DQA1P01909 254 aa3.28□□□□□ -1.88
RTF1-204ENST00000558117 IGLC1P0CG04 106 aa3.28□□□□□ -1.88
RTF1-204ENST00000558117 HIST1H1BP16401 226 aaKnown RBP3.28□□□□□ -1.88
RTF1-204ENST00000558117 S100A12P80511 92 aa3.28□□□□□ -1.88
RTF1-204ENST00000558117 SYCNQ0VAF6 134 aa3.28□□□□□ -1.88
RTF1-204ENST00000558117 BORCS7Q96B45 105 aa3.28□□□□□ -1.88
RTF1-204ENST00000558117 NARS2Q96I59 477 aaKnown RBP3.28□□□□□ -1.88
RTF1-204ENST00000558117 PSMG3Q9BT73 122 aaPredicted RBP3.28□□□□□ -1.88
RTF1-204ENST00000558117 CHCHD7Q9BUK0 85 aa3.28□□□□□ -1.88
RTF1-204ENST00000558117 MAP1LC3BQ9GZQ8 125 aa3.28□□□□□ -1.88
RTF1-204ENST00000558117 GNG13Q9P2W3 67 aa3.28□□□□□ -1.88
RTF1-204ENST00000558117 TIMM9Q9Y5J7 89 aa3.28□□□□□ -1.88
RTF1-204ENST00000558117 A8MWL6 223 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 FNDC10F2Z333 226 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 CORTO00230 105 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 LECT2O14960 151 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 HYPMO75409 117 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 LTAP01374 205 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 IL4P05112 153 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 CTSGP08311 255 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 OR10J4P0C629 311 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 NBEAP1P0C6P0 100 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 PYYP10082 97 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 EVI2AP22794 236 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 RAB5CP51148 216 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 RAB4BP61018 213 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 HERVK_113P63121 156 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 MT1HP80294 61 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 SERF2P84101 59 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 TDRG1Q3Y452 100 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 LUZP6Q538Z0 58 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 C10orf113Q5VZT2 155 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 EBLN2Q6P2I7 272 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 TOMM20LQ6UXN7 152 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 OR8A1Q8NGG7 326 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 DCANP1Q8TF63 244 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 MBD3L1Q8WWY6 194 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 TRGV9Q99603 122 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 194.2 ms