RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 NXT2Q9NPJ8 142 aaKnown RBP11.11□□□□□ -0.63
PBX4-202ENST00000557978 PGPEP1Q9NXJ5 209 aa11.11□□□□□ -0.63
PBX4-202ENST00000557978 SMCO4Q9NRQ5 59 aa11.1□□□□□ -0.63
PBX4-202ENST00000557978 UBE2D4Q9Y2X8 147 aa11.1□□□□□ -0.63
PBX4-202ENST00000557978 TRAPPC1Q9Y5R8 145 aa11.1□□□□□ -0.63
PBX4-202ENST00000557978 ZNF664Q8N3J9 261 aa11.09□□□□□ -0.63
PBX4-202ENST00000557978 MAPKAPK5-AS1Q8N8E1 139 aa11.09□□□□□ -0.63
PBX4-202ENST00000557978 TIMM21Q9BVV7 248 aa11.09□□□□□ -0.63
PBX4-202ENST00000557978 CDC42SE2Q9NRR3 84 aa11.09□□□□□ -0.63
PBX4-202ENST00000557978 IGLV10-54A0A075B6I4 117 aa11.09□□□□□ -0.63
PBX4-202ENST00000557978 IGKV3OR2-268A0A0C4DH90 116 aa11.09□□□□□ -0.63
PBX4-202ENST00000557978 ORMDL2Q53FV1 153 aa11.09□□□□□ -0.63
PBX4-202ENST00000557978 CDPF1Q6NVV7 123 aa11.09□□□□□ -0.63
PBX4-202ENST00000557978 Q8N814 137 aa11.09□□□□□ -0.63
PBX4-202ENST00000557978 BAALCQ8WXS3 180 aa11.09□□□□□ -0.63
PBX4-202ENST00000557978 ALKBH7Q9BT30 221 aaPredicted RBP11.09□□□□□ -0.63
PBX4-202ENST00000557978 DNAH5Q8TE73 4624 aa11.08□□□□□ -0.64
PBX4-202ENST00000557978 DYNC1H1Q14204 4646 aaKnown RBP11.07□□□□□ -0.64
PBX4-202ENST00000557978 C16orf90A8MZG2 172 aa11.07□□□□□ -0.64
PBX4-202ENST00000557978 G0S2P27469 103 aa11.07□□□□□ -0.64
PBX4-202ENST00000557978 IFI27P40305 119 aaPredicted RBP11.07□□□□□ -0.64
PBX4-202ENST00000557978 KRTAP10-2P60368 255 aa11.07□□□□□ -0.64
PBX4-202ENST00000557978 RPL39P62891 51 aaKnown RBP11.07□□□□□ -0.64
PBX4-202ENST00000557978 PRSS3P2Q8NHM4 247 aa11.07□□□□□ -0.64
PBX4-202ENST00000557978 C14orf177Q52M58 125 aa11.06□□□□□ -0.64
PBX4-202ENST00000557978 NTN5Q8WTR8 489 aaPredicted RBP11.06□□□□□ -0.64
PBX4-202ENST00000557978 YPEL4Q96NS1 127 aa11.06□□□□□ -0.64
PBX4-202ENST00000557978 SPANXA1Q9NS26 97 aa11.06□□□□□ -0.64
PBX4-202ENST00000557978 LECT2O14960 151 aa11.05□□□□□ -0.64
PBX4-202ENST00000557978 SS18Q15532 418 aa11.05□□□□□ -0.64
PBX4-202ENST00000557978 KRTAP26-1Q6PEX3 210 aa11.05□□□□□ -0.64
PBX4-202ENST00000557978 CBLN2Q8IUK8 224 aa11.05□□□□□ -0.64
PBX4-202ENST00000557978 CCL25O15444 150 aa11.04□□□□□ -0.64
PBX4-202ENST00000557978 WFDC2Q14508 124 aa11.04□□□□□ -0.64
PBX4-202ENST00000557978 CYSLTR1Q9Y271 337 aa11.04□□□□□ -0.64
PBX4-202ENST00000557978 PYGO1Q9Y3Y4 419 aa11.04□□□□□ -0.64
PBX4-202ENST00000557978 LINC00959A0A1B0GUT2 108 aa11.03□□□□□ -0.64
PBX4-202ENST00000557978 CHCHD10Q8WYQ3 142 aaPredicted RBP11.03□□□□□ -0.64
PBX4-202ENST00000557978 IGLV5-52A0A0A0MRZ9 124 aa11.02□□□□□ -0.64
PBX4-202ENST00000557978 C1orf196B1AJZ1 125 aa11.02□□□□□ -0.64
PBX4-202ENST00000557978 MRPS36P82909 103 aaKnown RBP11.02□□□□□ -0.64
PBX4-202ENST00000557978 C2orf66Q6UXQ4 117 aa11.02□□□□□ -0.64
PBX4-202ENST00000557978 GAGE12HA6NDE8 117 aa11.01□□□□□ -0.65
PBX4-202ENST00000557978 USP17L23D6RBM5 183 aa11.01□□□□□ -0.65
PBX4-202ENST00000557978 Q6ZUT4 128 aa11.01□□□□□ -0.65
PBX4-202ENST00000557978 LINC01549A6NIU2 74 aa11.01□□□□□ -0.65
PBX4-202ENST00000557978 FA2HQ7L5A8 372 aa11.01□□□□□ -0.65
PBX4-202ENST00000557978 LRP1BQ9NZR2 4599 aa11□□□□□ -0.65
PBX4-202ENST00000557978 IGLV2-33A0A075B6J2 118 aaPredicted RBP11□□□□□ -0.65
PBX4-202ENST00000557978 LINC01546A6NGU7 62 aa11□□□□□ -0.65
PBX4-202ENST00000557978 XCL1P47992 114 aa11□□□□□ -0.65
PBX4-202ENST00000557978 RNASE13Q5GAN3 156 aaKnown RBP11□□□□□ -0.65
PBX4-202ENST00000557978 CFAP161Q6P656 301 aa11□□□□□ -0.65
PBX4-202ENST00000557978 NPSP0C0P6 89 aa10.99□□□□□ -0.65
PBX4-202ENST00000557978 CD164L2Q6UWJ8 174 aa10.99□□□□□ -0.65
PBX4-202ENST00000557978 C18orf32Q8TCD1 76 aa10.99□□□□□ -0.65
PBX4-202ENST00000557978 TMEM141Q96I45 108 aa10.99□□□□□ -0.65
PBX4-202ENST00000557978 TRAV13-1A0A0B4J241 112 aa10.98□□□□□ -0.65
PBX4-202ENST00000557978 GCSHP23434 173 aa10.98□□□□□ -0.65
PBX4-202ENST00000557978 FUSP35637 526 aaKnown RBP eCLIP10.98□□□□□ -0.65
PBX4-202ENST00000557978 OPRPNQ99935 248 aaPredicted RBP10.98□□□□□ -0.65
PBX4-202ENST00000557978 IGLV4-3A0A075B6K6 122 aa10.97□□□□□ -0.65
PBX4-202ENST00000557978 RAB5BP61020 215 aa10.97□□□□□ -0.65
PBX4-202ENST00000557978 FOXI1Q12951 378 aa10.97□□□□□ -0.65
PBX4-202ENST00000557978 PAPPA-AS1Q5QFB9 102 aa10.97□□□□□ -0.65
PBX4-202ENST00000557978 Q6ZN92 141 aa10.97□□□□□ -0.65
PBX4-202ENST00000557978 FAM104AQ969W3 186 aa10.97□□□□□ -0.65
PBX4-202ENST00000557978 TOMM6Q96B49 74 aa10.97□□□□□ -0.65
PBX4-202ENST00000557978 AP5S1Q9NUS5 200 aa10.97□□□□□ -0.65
PBX4-202ENST00000557978 KIAA1109Q2LD37 5005 aa10.96□□□□□ -0.65
PBX4-202ENST00000557978 IFITM10A6NMD0 228 aa10.96□□□□□ -0.65
PBX4-202ENST00000557978 LINC00614P0C842 121 aa10.96□□□□□ -0.65
PBX4-202ENST00000557978 TEX43Q6ZNM6 134 aa10.96□□□□□ -0.65
PBX4-202ENST00000557978 IGIPA6NJ69 53 aa10.95□□□□□ -0.66
PBX4-202ENST00000557978 PRSS1P07477 247 aa10.95□□□□□ -0.66
PBX4-202ENST00000557978 TIMM17AQ99595 171 aa10.95□□□□□ -0.66
PBX4-202ENST00000557978 VCX2Q9H322 139 aa10.95□□□□□ -0.66
PBX4-202ENST00000557978 hDV102S1A0JD36 115 aa10.94□□□□□ -0.66
PBX4-202ENST00000557978 ERASQ7Z444 233 aa10.94□□□□□ -0.66
PBX4-202ENST00000557978 C2orf88Q9BSF0 95 aa10.94□□□□□ -0.66
PBX4-202ENST00000557978 COLCA2A8K830 154 aa10.93□□□□□ -0.66
PBX4-202ENST00000557978 SCGB3A1Q96QR1 104 aa10.93□□□□□ -0.66
PBX4-202ENST00000557978 COX7A2LO14548 114 aa10.92□□□□□ -0.66
PBX4-202ENST00000557978 TRGC2P03986 189 aa10.92□□□□□ -0.66
PBX4-202ENST00000557978 C15orf56Q8N910 161 aa10.92□□□□□ -0.66
PBX4-202ENST00000557978 AMELXQ99217 191 aa10.92□□□□□ -0.66
PBX4-202ENST00000557978 IGHV1-58A0A0C4DH39 117 aa10.92□□□□□ -0.66
PBX4-202ENST00000557978 MALP21145 153 aa10.92□□□□□ -0.66
PBX4-202ENST00000557978 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.91□□□□□ -0.66
PBX4-202ENST00000557978 CDK2AP2O75956 126 aa10.91□□□□□ -0.66
PBX4-202ENST00000557978 URB1-AS1Q96HZ7 61 aa10.91□□□□□ -0.66
PBX4-202ENST00000557978 RYR1P21817 5038 aa10.9□□□□□ -0.66
PBX4-202ENST00000557978 GVQW2A0A096LPI5 108 aaPredicted RBP10.9□□□□□ -0.66
PBX4-202ENST00000557978 APOMO95445 188 aa10.9□□□□□ -0.66
PBX4-202ENST00000557978 KRTAP10-1P60331 282 aa10.9□□□□□ -0.66
PBX4-202ENST00000557978 SCO1O75880 301 aa10.89□□□□□ -0.67
PBX4-202ENST00000557978 HBDP02042 147 aa10.89□□□□□ -0.67
PBX4-202ENST00000557978 CNBPP62633 177 aaKnown RBP10.89□□□□□ -0.67
PBX4-202ENST00000557978 LINC00173Q6ZV60 143 aa10.89□□□□□ -0.67
PBX4-202ENST00000557978 CHCHD1Q96BP2 118 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms