RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 BAGE3Q86Y29 109 aa14.25□□□□□ -0.13
CASC4-204ENST00000557945 RMI2Q96E14 147 aa14.25□□□□□ -0.13
CASC4-204ENST00000557945 CDC42SE2Q9NRR3 84 aa14.25□□□□□ -0.13
CASC4-204ENST00000557945 CSDC2Q9Y534 153 aaKnown RBP14.25□□□□□ -0.13
CASC4-204ENST00000557945 ZNF664Q8N3J9 261 aa14.24□□□□□ -0.13
CASC4-204ENST00000557945 IGKV2D-24A0A075B6R9 120 aa14.23□□□□□ -0.13
CASC4-204ENST00000557945 MIAQ16674 131 aa14.23□□□□□ -0.13
CASC4-204ENST00000557945 Q6ZUT4 128 aa14.23□□□□□ -0.13
CASC4-204ENST00000557945 PSCAO43653 123 aa14.22□□□□□ -0.13
CASC4-204ENST00000557945 RNASE13Q5GAN3 156 aaKnown RBP14.22□□□□□ -0.13
CASC4-204ENST00000557945 C1orf43Q9BWL3 253 aa14.22□□□□□ -0.13
CASC4-204ENST00000557945 TM2D2Q9BX73 214 aa14.22□□□□□ -0.13
CASC4-204ENST00000557945 DNAH2Q9P225 4427 aa14.22□□□□□ -0.13
CASC4-204ENST00000557945 Q6ZRN7 208 aaPredicted RBP14.22□□□□□ -0.13
CASC4-204ENST00000557945 TOMM6Q96B49 74 aa14.22□□□□□ -0.13
CASC4-204ENST00000557945 OPRPNQ99935 248 aaPredicted RBP14.22□□□□□ -0.13
CASC4-204ENST00000557945 PYGO1Q9Y3Y4 419 aa14.22□□□□□ -0.13
CASC4-204ENST00000557945 IGLV10-54A0A075B6I4 117 aa14.21□□□□□ -0.14
CASC4-204ENST00000557945 CHCHD1Q96BP2 118 aaKnown RBP14.21□□□□□ -0.14
CASC4-204ENST00000557945 PMCHL1Q16048 86 aa14.2□□□□□ -0.14
CASC4-204ENST00000557945 COX11Q9Y6N1 276 aa14.2□□□□□ -0.14
CASC4-204ENST00000557945 TRAV8-4A0A0B4J246 113 aa14.19□□□□□ -0.14
CASC4-204ENST00000557945 MRPS36P82909 103 aaKnown RBP14.19□□□□□ -0.14
CASC4-204ENST00000557945 SCGB3A1Q96QR1 104 aa14.19□□□□□ -0.14
CASC4-204ENST00000557945 IGLV4-3A0A075B6K6 122 aa14.18□□□□□ -0.14
CASC4-204ENST00000557945 HIST1H2BKO60814 126 aa14.18□□□□□ -0.14
CASC4-204ENST00000557945 HIST1H2BJP06899 126 aa14.18□□□□□ -0.14
CASC4-204ENST00000557945 HIST1H2BOP23527 126 aa14.18□□□□□ -0.14
CASC4-204ENST00000557945 HIST1H2BBP33778 126 aa14.18□□□□□ -0.14
CASC4-204ENST00000557945 HIST1H2BDP58876 126 aa14.18□□□□□ -0.14
CASC4-204ENST00000557945 HIST1H2BCP62807 126 aa14.18□□□□□ -0.14
CASC4-204ENST00000557945 HIST2H2BEQ16778 126 aa14.18□□□□□ -0.14
CASC4-204ENST00000557945 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.18□□□□□ -0.14
CASC4-204ENST00000557945 LINC00336Q6ZUF6 198 aa14.18□□□□□ -0.14
CASC4-204ENST00000557945 HIST1H2BHQ93079 126 aa14.18□□□□□ -0.14
CASC4-204ENST00000557945 HIST1H2BNQ99877 126 aa14.18□□□□□ -0.14
CASC4-204ENST00000557945 HIST1H2BMQ99879 126 aa14.18□□□□□ -0.14
CASC4-204ENST00000557945 PRSS29PA6NIE9 313 aa14.17□□□□□ -0.14
CASC4-204ENST00000557945 LINC01549A6NIU2 74 aa14.17□□□□□ -0.14
CASC4-204ENST00000557945 IGIPA6NJ69 53 aa14.17□□□□□ -0.14
CASC4-204ENST00000557945 HBDP02042 147 aa14.17□□□□□ -0.14
CASC4-204ENST00000557945 Q6ZN92 141 aa14.17□□□□□ -0.14
CASC4-204ENST00000557945 FAM104AQ969W3 186 aa14.17□□□□□ -0.14
CASC4-204ENST00000557945 TMEM141Q96I45 108 aa14.17□□□□□ -0.14
CASC4-204ENST00000557945 TRAV13-1A0A0B4J241 112 aa14.16□□□□□ -0.14
CASC4-204ENST00000557945 LINC00959A0A1B0GUT2 108 aa14.16□□□□□ -0.14
CASC4-204ENST00000557945 C1orf196B1AJZ1 125 aa14.16□□□□□ -0.14
CASC4-204ENST00000557945 HSBP1O75506 76 aa14.16□□□□□ -0.14
CASC4-204ENST00000557945 SERF1AO75920 110 aa14.16□□□□□ -0.14
CASC4-204ENST00000557945 TNP2Q05952 138 aa14.16□□□□□ -0.14
CASC4-204ENST00000557945 ERASQ7Z444 233 aa14.16□□□□□ -0.14
CASC4-204ENST00000557945 A0A096LNJ9 63 aa14.15□□□□□ -0.14
CASC4-204ENST00000557945 SS18Q15532 418 aa14.15□□□□□ -0.14
CASC4-204ENST00000557945 CHCHD10Q8WYQ3 142 aaPredicted RBP14.15□□□□□ -0.14
CASC4-204ENST00000557945 TIMM17AQ99595 171 aa14.15□□□□□ -0.14
CASC4-204ENST00000557945 DNAH10Q8IVF4 4471 aa14.15□□□□□ -0.14
CASC4-204ENST00000557945 IFITM10A6NMD0 228 aa14.14□□□□□ -0.15
CASC4-204ENST00000557945 NPSP0C0P6 89 aa14.14□□□□□ -0.15
CASC4-204ENST00000557945 VCX2Q9H322 139 aa14.14□□□□□ -0.15
CASC4-204ENST00000557945 PAPPA-AS1Q5QFB9 102 aa14.13□□□□□ -0.15
CASC4-204ENST00000557945 TEX43Q6ZNM6 134 aa14.13□□□□□ -0.15
CASC4-204ENST00000557945 GAGE12HA6NDE8 117 aa14.12□□□□□ -0.15
CASC4-204ENST00000557945 XCL1P47992 114 aa14.12□□□□□ -0.15
CASC4-204ENST00000557945 ZC2HC1BQ5TFG8 222 aa14.12□□□□□ -0.15
CASC4-204ENST00000557945 KRTAP26-1Q6PEX3 210 aa14.12□□□□□ -0.15
CASC4-204ENST00000557945 MAPKAPK5-AS1Q8N8E1 139 aa14.12□□□□□ -0.15
CASC4-204ENST00000557945 C2orf88Q9BSF0 95 aa14.12□□□□□ -0.15
CASC4-204ENST00000557945 DNAH17Q9UFH2 4485 aa14.12□□□□□ -0.15
CASC4-204ENST00000557945 CCL25O15444 150 aa14.11□□□□□ -0.15
CASC4-204ENST00000557945 LINC00310P59036 64 aa14.11□□□□□ -0.15
CASC4-204ENST00000557945 FAM19A2Q8N3H0 131 aa14.11□□□□□ -0.15
CASC4-204ENST00000557945 BAALCQ8WXS3 180 aa14.11□□□□□ -0.15
CASC4-204ENST00000557945 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.1□□□□□ -0.15
CASC4-204ENST00000557945 LECT2O14960 151 aa14.1□□□□□ -0.15
CASC4-204ENST00000557945 NUPR1O60356 82 aa14.1□□□□□ -0.15
CASC4-204ENST00000557945 PDZD11Q5EBL8 140 aa14.1□□□□□ -0.15
CASC4-204ENST00000557945 AMELXQ99217 191 aa14.09□□□□□ -0.15
CASC4-204ENST00000557945 A0A087WTM6 91 aa14.09□□□□□ -0.15
CASC4-204ENST00000557945 EREGO14944 169 aa14.09□□□□□ -0.15
CASC4-204ENST00000557945 FRAS1Q86XX4 4008 aa14.08□□□□□ -0.16
CASC4-204ENST00000557945 LRCOL1A6NCL2 159 aa14.08□□□□□ -0.16
CASC4-204ENST00000557945 ATP5LO75964 103 aa14.08□□□□□ -0.16
CASC4-204ENST00000557945 LINC00173Q6ZV60 143 aa14.08□□□□□ -0.16
CASC4-204ENST00000557945 NDUFA6P56556 154 aa14.07□□□□□ -0.16
CASC4-204ENST00000557945 FOXI1Q12951 378 aa14.07□□□□□ -0.16
CASC4-204ENST00000557945 CD164L2Q6UWJ8 174 aa14.07□□□□□ -0.16
CASC4-204ENST00000557945 WFDC2Q14508 124 aa14.06□□□□□ -0.16
CASC4-204ENST00000557945 UBE2D1P51668 147 aa14.05□□□□□ -0.16
CASC4-204ENST00000557945 FAT2Q9NYQ8 4349 aa14.05□□□□□ -0.16
CASC4-204ENST00000557945 USP17L23D6RBM5 183 aa14.04□□□□□ -0.16
CASC4-204ENST00000557945 PMVKQ15126 192 aa14.04□□□□□ -0.16
CASC4-204ENST00000557945 LINC00242Q5T6M2 205 aa14.03□□□□□ -0.16
CASC4-204ENST00000557945 IFI27L1Q96BM0 104 aa14.03□□□□□ -0.16
CASC4-204ENST00000557945 CST9LQ9H4G1 147 aa14.03□□□□□ -0.16
CASC4-204ENST00000557945 LEPROTL1O95214 131 aa14.02□□□□□ -0.17
CASC4-204ENST00000557945 COX7A2LO14548 114 aa14.01□□□□□ -0.17
CASC4-204ENST00000557945 PRSS1P07477 247 aa14.01□□□□□ -0.17
CASC4-204ENST00000557945 FABP4P15090 132 aa14.01□□□□□ -0.17
CASC4-204ENST00000557945 COA6Q5JTJ3 125 aaKnown RBP14.01□□□□□ -0.17
CASC4-204ENST00000557945 C5orf38Q86SI9 138 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms