RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 IGKCP01834 107 aa5.17□□□□□ -1.58
SPG11-204ENST00000557866 RPL36AP83881 106 aaKnown RBP5.17□□□□□ -1.58
SPG11-204ENST00000557866 RPL36ALQ969Q0 106 aaKnown RBP5.17□□□□□ -1.58
SPG11-204ENST00000557866 CST9LQ9H4G1 147 aa5.17□□□□□ -1.58
SPG11-204ENST00000557866 CHTOPQ9Y3Y2 248 aaKnown RBP5.17□□□□□ -1.58
SPG11-204ENST00000557866 PKD1L1Q8TDX9 2849 aa5.17□□□□□ -1.58
SPG11-204ENST00000557866 IGLV4-69A0A075B6H9 119 aa5.16□□□□□ -1.58
SPG11-204ENST00000557866 LINC01549A6NIU2 74 aa5.16□□□□□ -1.58
SPG11-204ENST00000557866 HSBP1L1C9JCN9 74 aa5.16□□□□□ -1.58
SPG11-204ENST00000557866 F8VRH5 84 aa5.16□□□□□ -1.58
SPG11-204ENST00000557866 PRB2P02812 416 aaPredicted RBP5.16□□□□□ -1.58
SPG11-204ENST00000557866 FGF6P10767 208 aa5.16□□□□□ -1.58
SPG11-204ENST00000557866 CRYBA4P53673 196 aa5.16□□□□□ -1.58
SPG11-204ENST00000557866 TCTAP57738 103 aa5.16□□□□□ -1.58
SPG11-204ENST00000557866 COTL1Q14019 142 aa5.16□□□□□ -1.58
SPG11-204ENST00000557866 PMVKQ15126 192 aa5.16□□□□□ -1.58
SPG11-204ENST00000557866 CEMP1Q6PRD7 247 aaPredicted RBP5.16□□□□□ -1.58
SPG11-204ENST00000557866 DAZ4Q86SG3 579 aaKnown RBP5.16□□□□□ -1.58
SPG11-204ENST00000557866 SBSPONQ8IVN8 264 aa5.16□□□□□ -1.58
SPG11-204ENST00000557866 DAZ3Q9NR90 486 aaKnown RBP5.16□□□□□ -1.58
SPG11-204ENST00000557866 UQCR10Q9UDW1 63 aa5.16□□□□□ -1.58
SPG11-204ENST00000557866 ZMAT5Q9UDW3 170 aaKnown RBP5.16□□□□□ -1.58
SPG11-204ENST00000557866 UBE2D4Q9Y2X8 147 aa5.16□□□□□ -1.58
SPG11-204ENST00000557866 PYGO1Q9Y3Y4 419 aa5.16□□□□□ -1.58
SPG11-204ENST00000557866 HUWE1Q7Z6Z7 4374 aaKnown RBP5.15□□□□□ -1.58
SPG11-204ENST00000557866 IGKV2D-26A0A0A0MRZ7 120 aa5.15□□□□□ -1.59
SPG11-204ENST00000557866 COX8AP10176 69 aa5.15□□□□□ -1.59
SPG11-204ENST00000557866 AMELXQ99217 191 aa5.15□□□□□ -1.59
SPG11-204ENST00000557866 PRADC1Q9BSG0 188 aa5.15□□□□□ -1.59
SPG11-204ENST00000557866 C11orf86A6NJI1 115 aa5.14□□□□□ -1.59
SPG11-204ENST00000557866 K7EIL1 84 aa5.14□□□□□ -1.59
SPG11-204ENST00000557866 SPART-AS1P0CW21 52 aa5.14□□□□□ -1.59
SPG11-204ENST00000557866 PLNP26678 52 aa5.14□□□□□ -1.59
SPG11-204ENST00000557866 DAD1P61803 113 aa5.14□□□□□ -1.59
SPG11-204ENST00000557866 CTAG1AP78358 180 aa5.14□□□□□ -1.59
SPG11-204ENST00000557866 DEFA6Q01524 100 aa5.14□□□□□ -1.59
SPG11-204ENST00000557866 KPRPQ5T749 579 aaPredicted RBP5.14□□□□□ -1.59
SPG11-204ENST00000557866 Q6ZUT4 128 aa5.14□□□□□ -1.59
SPG11-204ENST00000557866 PCP2Q8IVA1 136 aa5.14□□□□□ -1.59
SPG11-204ENST00000557866 VSIG2Q96IQ7 327 aa5.14□□□□□ -1.59
SPG11-204ENST00000557866 SPANXA1Q9NS26 97 aa5.14□□□□□ -1.59
SPG11-204ENST00000557866 GYPEP15421 78 aa5.13□□□□□ -1.59
SPG11-204ENST00000557866 HNRNPA3P51991 378 aaKnown RBP5.13□□□□□ -1.59
SPG11-204ENST00000557866 C12orf74Q32Q52 190 aa5.13□□□□□ -1.59
SPG11-204ENST00000557866 KRTAP15-1Q3LI76 137 aa5.13□□□□□ -1.59
SPG11-204ENST00000557866 RNASE13Q5GAN3 156 aaKnown RBP5.13□□□□□ -1.59
SPG11-204ENST00000557866 SLC25A34Q6PIV7 304 aa5.13□□□□□ -1.59
SPG11-204ENST00000557866 C2orf91Q6ZV80 131 aa5.13□□□□□ -1.59
SPG11-204ENST00000557866 BOD1L2Q8IYS8 172 aa5.13□□□□□ -1.59
SPG11-204ENST00000557866 TIMM21Q9BVV7 248 aa5.13□□□□□ -1.59
SPG11-204ENST00000557866 SNHG12Q9BXW3 62 aa5.13□□□□□ -1.59
SPG11-204ENST00000557866 TTTY13Q9BZ97 58 aa5.13□□□□□ -1.59
SPG11-204ENST00000557866 GTSF1LQ9H1H1 148 aa5.13□□□□□ -1.59
SPG11-204ENST00000557866 VCX2Q9H322 139 aa5.13□□□□□ -1.59
SPG11-204ENST00000557866 PRO0255Q9UI72 69 aa5.13□□□□□ -1.59
SPG11-204ENST00000557866 A0A0J9YXV3 536 aa5.12□□□□□ -1.59
SPG11-204ENST00000557866 NPSP0C0P6 89 aa5.12□□□□□ -1.59
SPG11-204ENST00000557866 NMUP48645 174 aa5.12□□□□□ -1.59
SPG11-204ENST00000557866 MRPS36P82909 103 aaKnown RBP5.12□□□□□ -1.59
SPG11-204ENST00000557866 MRPL52Q86TS9 123 aaKnown RBP5.12□□□□□ -1.59
SPG11-204ENST00000557866 NFE4Q86UQ8 179 aa5.12□□□□□ -1.59
SPG11-204ENST00000557866 MAPKAPK5-AS1Q8N8E1 139 aa5.12□□□□□ -1.59
SPG11-204ENST00000557866 TMEM243Q9BU79 118 aa5.12□□□□□ -1.59
SPG11-204ENST00000557866 MRPS16Q9Y3D3 137 aaKnown RBP5.12□□□□□ -1.59
SPG11-204ENST00000557866 TRBV6-8A0A0A6YYG3 113 aa5.11□□□□□ -1.59
SPG11-204ENST00000557866 A0A0J9YY99 117 aa5.11□□□□□ -1.59
SPG11-204ENST00000557866 E9PLD3 99 aa5.11□□□□□ -1.59
SPG11-204ENST00000557866 F5H768 121 aa5.11□□□□□ -1.59
SPG11-204ENST00000557866 DLEU1O43261 78 aa5.11□□□□□ -1.59
SPG11-204ENST00000557866 ATP5G1P05496 136 aa5.11□□□□□ -1.59
SPG11-204ENST00000557866 ZNF22P17026 224 aaPredicted RBP5.11□□□□□ -1.59
SPG11-204ENST00000557866 GAGE6Q13070 117 aa5.11□□□□□ -1.59
SPG11-204ENST00000557866 C21orf62-AS1Q17RA5 79 aa5.11□□□□□ -1.59
SPG11-204ENST00000557866 ATP6V0E2Q8NHE4 81 aa5.11□□□□□ -1.59
SPG11-204ENST00000557866 DNAH9Q9NYC9 4486 aa5.11□□□□□ -1.59
SPG11-204ENST00000557866 TRBV25-1A0A075B6N4 114 aa5.1□□□□□ -1.59
SPG11-204ENST00000557866 TRAV26-1A0A087WT03 109 aa5.1□□□□□ -1.59
SPG11-204ENST00000557866 A0A096LPF7 62 aa5.1□□□□□ -1.59
SPG11-204ENST00000557866 HTN3P15516 51 aa5.1□□□□□ -1.59
SPG11-204ENST00000557866 UBE2D1P51668 147 aa5.1□□□□□ -1.59
SPG11-204ENST00000557866 PAPPA-AS1Q5QFB9 102 aa5.1□□□□□ -1.59
SPG11-204ENST00000557866 LURAP1LQ8IV03 231 aa5.1□□□□□ -1.59
SPG11-204ENST00000557866 DNHD1Q96M86 4753 aa5.1□□□□□ -1.59
SPG11-204ENST00000557866 CHAC1Q9BUX1 264 aa5.1□□□□□ -1.59
SPG11-204ENST00000557866 C11orf68Q9H3H3 251 aaKnown RBP5.1□□□□□ -1.59
SPG11-204ENST00000557866 CDC42SE2Q9NRR3 84 aa5.1□□□□□ -1.59
SPG11-204ENST00000557866 CSDC2Q9Y534 153 aaKnown RBP5.1□□□□□ -1.59
SPG11-204ENST00000557866 NOTCH1P46531 2555 aa5.09□□□□□ -1.59
SPG11-204ENST00000557866 IGLV4-60A0A075B6I1 120 aa5.09□□□□□ -1.59
SPG11-204ENST00000557866 TRAV8-6A0A0B4J262 113 aa5.09□□□□□ -1.59
SPG11-204ENST00000557866 A0A0J9YWU9 116 aa5.09□□□□□ -1.59
SPG11-204ENST00000557866 TEX48A0A1B0GUV7 120 aa5.09□□□□□ -1.59
SPG11-204ENST00000557866 TINCRA0A1B0GVN0 87 aa5.09□□□□□ -1.59
SPG11-204ENST00000557866 TMEM223A0PJW6 202 aa5.09□□□□□ -1.59
SPG11-204ENST00000557866 H7C423 109 aa5.09□□□□□ -1.59
SPG11-204ENST00000557866 M0R143 59 aa5.09□□□□□ -1.59
SPG11-204ENST00000557866 TSPEAR-AS2P59090 65 aa5.09□□□□□ -1.59
SPG11-204ENST00000557866 COX6A2Q02221 97 aa5.09□□□□□ -1.59
SPG11-204ENST00000557866 TMEM97Q5BJF2 176 aa5.09□□□□□ -1.59
SPG11-204ENST00000557866 TMEM170BQ5T4T1 132 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms