RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 BAGE2Q86Y30 109 aa0.54□□□□□ -2.32
GPHN-216ENST00000557678 TEX14Q8IWB6 1497 aa0.54□□□□□ -2.32
GPHN-216ENST00000557678 ZMYM4Q5VZL5 1548 aa0.54□□□□□ -2.32
GPHN-216ENST00000557678 KDM5AP29375 1690 aaKnown RBP0.53□□□□□ -2.32
GPHN-216ENST00000557678 ANKRD26Q9UPS8 1709 aa0.53□□□□□ -2.32
GPHN-216ENST00000557678 KDM3BQ7LBC6 1761 aa0.53□□□□□ -2.32
GPHN-216ENST00000557678 JMJD1CQ15652 2540 aa0.53□□□□□ -2.32
GPHN-216ENST00000557678 CRYM-AS1A6NIL9 109 aa0.53□□□□□ -2.32
GPHN-216ENST00000557678 CHKB-CPT1BH3BT56 60 aa0.53□□□□□ -2.32
GPHN-216ENST00000557678 M0R143 59 aa0.53□□□□□ -2.32
GPHN-216ENST00000557678 NDUFC1O43677 76 aa0.53□□□□□ -2.32
GPHN-216ENST00000557678 SNCAP37840 140 aa0.53□□□□□ -2.32
GPHN-216ENST00000557678 S100A10P60903 97 aa0.53□□□□□ -2.32
GPHN-216ENST00000557678 UBE2D3P61077 147 aa0.53□□□□□ -2.32
GPHN-216ENST00000557678 UBE2D2P62837 147 aa0.53□□□□□ -2.32
GPHN-216ENST00000557678 PRB3Q04118 309 aaPredicted RBP0.53□□□□□ -2.32
GPHN-216ENST00000557678 TSLPQ969D9 159 aa0.53□□□□□ -2.32
GPHN-216ENST00000557678 MANBALQ9NQG1 85 aa0.53□□□□□ -2.32
GPHN-216ENST00000557678 FAIMQ9NVQ4 179 aa0.53□□□□□ -2.32
GPHN-216ENST00000557678 LINC00474Q9P2X8 69 aa0.53□□□□□ -2.32
GPHN-216ENST00000557678 PRO1854Q9UHT4 67 aa0.53□□□□□ -2.32
GPHN-216ENST00000557678 NSD3Q9BZ95 1437 aa0.53□□□□□ -2.32
GPHN-216ENST00000557678 EHBP1L1Q8N3D4 1523 aa0.53□□□□□ -2.33
GPHN-216ENST00000557678 ZNF462Q96JM2 2506 aa0.53□□□□□ -2.33
GPHN-216ENST00000557678 SFT2D2O95562 160 aa0.52□□□□□ -2.33
GPHN-216ENST00000557678 NMBP08949 121 aa0.52□□□□□ -2.33
GPHN-216ENST00000557678 TRAPPC2P0DI81 140 aa0.52□□□□□ -2.33
GPHN-216ENST00000557678 TRAPPC2BP0DI82 140 aa0.52□□□□□ -2.33
GPHN-216ENST00000557678 S100A3P33764 101 aa0.52□□□□□ -2.33
GPHN-216ENST00000557678 Q0VG73 95 aa0.52□□□□□ -2.33
GPHN-216ENST00000557678 UBE2DNLQ8IWF7 75 aa0.52□□□□□ -2.33
GPHN-216ENST00000557678 FAM103A1Q9BTL3 118 aaKnown RBP0.52□□□□□ -2.33
GPHN-216ENST00000557678 NPVFQ9HCQ7 196 aa0.52□□□□□ -2.33
GPHN-216ENST00000557678 CDC42SE2Q9NRR3 84 aa0.52□□□□□ -2.33
GPHN-216ENST00000557678 PLAC8Q9NZF1 115 aa0.52□□□□□ -2.33
GPHN-216ENST00000557678 TROQ12816 1431 aaPredicted RBP0.52□□□□□ -2.33
GPHN-216ENST00000557678 FBN2P35556 2912 aa0.52□□□□□ -2.33
GPHN-216ENST00000557678 SHANK2Q9UPX8 1470 aa0.52□□□□□ -2.33
GPHN-216ENST00000557678 ARHGEF5Q12774 1597 aa0.52□□□□□ -2.33
GPHN-216ENST00000557678 CACNA1CQ13936 2221 aa0.52□□□□□ -2.33
GPHN-216ENST00000557678 IGLC7A0M8Q6 106 aa0.51□□□□□ -2.33
GPHN-216ENST00000557678 G3V318 75 aa0.51□□□□□ -2.33
GPHN-216ENST00000557678 PLXNB2O15031 1838 aa0.51□□□□□ -2.33
GPHN-216ENST00000557678 ABCC5O15440 1437 aa0.51□□□□□ -2.33
GPHN-216ENST00000557678 MGPP08493 103 aa0.51□□□□□ -2.33
GPHN-216ENST00000557678 PKIAP61925 76 aa0.51□□□□□ -2.33
GPHN-216ENST00000557678 PDCD11Q14690 1871 aaKnown RBP0.51□□□□□ -2.33
GPHN-216ENST00000557678 COL5A1-AS1Q5SY13 56 aa0.51□□□□□ -2.33
GPHN-216ENST00000557678 FAM213BQ8TBF2 198 aa0.51□□□□□ -2.33
GPHN-216ENST00000557678 DPY30Q9C005 99 aa0.51□□□□□ -2.33
GPHN-216ENST00000557678 NXT2Q9NPJ8 142 aaKnown RBP0.51□□□□□ -2.33
GPHN-216ENST00000557678 LINC01558Q9Y6Z2 57 aa0.51□□□□□ -2.33
GPHN-216ENST00000557678 MUC5BQ9HC84 5762 aaPredicted RBP0.5□□□□□ -2.33
GPHN-216ENST00000557678 ZNF236Q9UL36 1845 aa0.5□□□□□ -2.33
GPHN-216ENST00000557678 NUP188Q5SRE5 1749 aa0.5□□□□□ -2.33
GPHN-216ENST00000557678 TTC37Q6PGP7 1564 aa0.5□□□□□ -2.33
GPHN-216ENST00000557678 PRDM15P57071 1507 aaPredicted RBP0.5□□□□□ -2.33
GPHN-216ENST00000557678 HMGXB3Q12766 1538 aa0.5□□□□□ -2.33
GPHN-216ENST00000557678 MAGI1Q96QZ7 1491 aaPredicted RBP0.5□□□□□ -2.33
GPHN-216ENST00000557678 TRAV22A0A0B4J277 110 aa0.5□□□□□ -2.33
GPHN-216ENST00000557678 A0A0D9SFI3 127 aa0.5□□□□□ -2.33
GPHN-216ENST00000557678 ATOX1O00244 68 aa0.5□□□□□ -2.33
GPHN-216ENST00000557678 SAA2P0DJI9 122 aaPredicted RBP0.5□□□□□ -2.33
GPHN-216ENST00000557678 SEC11AP67812 179 aa0.5□□□□□ -2.33
GPHN-216ENST00000557678 COX6A2Q02221 97 aa0.5□□□□□ -2.33
GPHN-216ENST00000557678 AHCTF1Q8WYP5 2266 aa0.5□□□□□ -2.33
GPHN-216ENST00000557678 BTAF1O14981 1849 aa0.5□□□□□ -2.33
GPHN-216ENST00000557678 SCN7AQ01118 1682 aa0.49□□□□□ -2.33
GPHN-216ENST00000557678 ABCC10Q5T3U5 1492 aa0.49□□□□□ -2.33
GPHN-216ENST00000557678 MLH3Q9UHC1 1453 aa0.49□□□□□ -2.33
GPHN-216ENST00000557678 hADV29S1A0JD25 119 aa0.49□□□□□ -2.33
GPHN-216ENST00000557678 GNGT2O14610 69 aa0.49□□□□□ -2.33
GPHN-216ENST00000557678 NCMAPQ5T1S8 102 aa0.49□□□□□ -2.33
GPHN-216ENST00000557678 PMCHL2Q9BQD1 86 aa0.49□□□□□ -2.33
GPHN-216ENST00000557678 ARL2-SNX15V9GYD0 113 aa0.49□□□□□ -2.33
GPHN-216ENST00000557678 CLTCQ00610 1675 aaKnown RBP0.49□□□□□ -2.33
GPHN-216ENST00000557678 SMARCA2P51531 1590 aa0.49□□□□□ -2.33
GPHN-216ENST00000557678 CACNA1HO95180 2353 aa0.48□□□□□ -2.33
GPHN-216ENST00000557678 ASXL3Q9C0F0 2248 aa0.48□□□□□ -2.33
GPHN-216ENST00000557678 MPC2O95563 127 aa0.48□□□□□ -2.33
GPHN-216ENST00000557678 HAMPP81172 84 aa0.48□□□□□ -2.33
GPHN-216ENST00000557678 MYO7BQ6PIF6 2116 aa0.48□□□□□ -2.33
GPHN-216ENST00000557678 FAM223AQ8IWN6 122 aa0.48□□□□□ -2.33
GPHN-216ENST00000557678 VAMP8Q9BV40 100 aa0.48□□□□□ -2.33
GPHN-216ENST00000557678 CNFNQ9BYD5 112 aa0.48□□□□□ -2.33
GPHN-216ENST00000557678 FAM208BQ5VWN6 2430 aa0.48□□□□□ -2.33
GPHN-216ENST00000557678 BAZ1AQ9NRL2 1556 aaPredicted RBP0.48□□□□□ -2.33
GPHN-216ENST00000557678 ABCC2Q92887 1545 aa0.48□□□□□ -2.33
GPHN-216ENST00000557678 ARHGEF12Q9NZN5 1544 aa0.48□□□□□ -2.33
GPHN-216ENST00000557678 ANKRD36BQ8N2N9 1353 aa0.47□□□□□ -2.33
GPHN-216ENST00000557678 LRP6O75581 1613 aa0.47□□□□□ -2.33
GPHN-216ENST00000557678 A0A1B0GWA3 101 aa0.47□□□□□ -2.33
GPHN-216ENST00000557678 MT-ATP8P03928 68 aa0.47□□□□□ -2.33
GPHN-216ENST00000557678 IGLC1P0CG04 106 aa0.47□□□□□ -2.33
GPHN-216ENST00000557678 UBA52P62987 128 aaKnown RBP0.47□□□□□ -2.33
GPHN-216ENST00000557678 PMCHL1Q16048 86 aa0.47□□□□□ -2.33
GPHN-216ENST00000557678 Q6JHZ5 121 aa0.47□□□□□ -2.33
GPHN-216ENST00000557678 SSBP3-AS1Q7Z2R9 100 aa0.47□□□□□ -2.33
GPHN-216ENST00000557678 TMEM263Q8WUH6 116 aaKnown RBP0.47□□□□□ -2.33
GPHN-216ENST00000557678 TRGV9Q99603 122 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms