RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 LINC00614P0C842 121 aa9.48□□□□□ -0.89
SUPT16H-208ENST00000557652 REG3AQ06141 175 aa9.48□□□□□ -0.89
SUPT16H-208ENST00000557652 C2orf66Q6UXQ4 117 aa9.48□□□□□ -0.89
SUPT16H-208ENST00000557652 Q8N3U1 123 aa9.48□□□□□ -0.89
SUPT16H-208ENST00000557652 CHCHD1Q96BP2 118 aaKnown RBP9.48□□□□□ -0.89
SUPT16H-208ENST00000557652 CDC42SE2Q9NRR3 84 aa9.48□□□□□ -0.89
SUPT16H-208ENST00000557652 RYR2Q92736 4967 aa9.47□□□□□ -0.89
SUPT16H-208ENST00000557652 LINC00269Q8N2A0 174 aa9.47□□□□□ -0.89
SUPT16H-208ENST00000557652 ZNF664Q8N3J9 261 aa9.47□□□□□ -0.89
SUPT16H-208ENST00000557652 DEFB104AQ8WTQ1 72 aa9.47□□□□□ -0.89
SUPT16H-208ENST00000557652 C1orf43Q9BWL3 253 aa9.47□□□□□ -0.89
SUPT16H-208ENST00000557652 ENHOQ6UWT2 76 aa9.46□□□□□ -0.9
SUPT16H-208ENST00000557652 Q6ZRN7 208 aaPredicted RBP9.46□□□□□ -0.9
SUPT16H-208ENST00000557652 TOMM6Q96B49 74 aa9.46□□□□□ -0.9
SUPT16H-208ENST00000557652 TIMM17AQ99595 171 aa9.46□□□□□ -0.9
SUPT16H-208ENST00000557652 RTL8CO15255 209 aa9.45□□□□□ -0.9
SUPT16H-208ENST00000557652 RPL39P62891 51 aaKnown RBP9.45□□□□□ -0.9
SUPT16H-208ENST00000557652 Q9HAA7 133 aa9.45□□□□□ -0.9
SUPT16H-208ENST00000557652 HYDINQ4G0P3 5121 aa9.45□□□□□ -0.9
SUPT16H-208ENST00000557652 PSCAO43653 123 aa9.44□□□□□ -0.9
SUPT16H-208ENST00000557652 Q6ZN92 141 aa9.44□□□□□ -0.9
SUPT16H-208ENST00000557652 ERASQ7Z444 233 aa9.44□□□□□ -0.9
SUPT16H-208ENST00000557652 BAGE3Q86Y29 109 aa9.44□□□□□ -0.9
SUPT16H-208ENST00000557652 TMEM141Q96I45 108 aa9.44□□□□□ -0.9
SUPT16H-208ENST00000557652 IGKV2D-24A0A075B6R9 120 aa9.43□□□□□ -0.9
SUPT16H-208ENST00000557652 EREGO14944 169 aa9.43□□□□□ -0.9
SUPT16H-208ENST00000557652 HBDP02042 147 aa9.43□□□□□ -0.9
SUPT16H-208ENST00000557652 SS18Q15532 418 aa9.43□□□□□ -0.9
SUPT16H-208ENST00000557652 IGIPA6NJ69 53 aa9.42□□□□□ -0.9
SUPT16H-208ENST00000557652 C1orf196B1AJZ1 125 aa9.42□□□□□ -0.9
SUPT16H-208ENST00000557652 C2orf88Q9BSF0 95 aa9.42□□□□□ -0.9
SUPT16H-208ENST00000557652 PRSS29PA6NIE9 313 aa9.41□□□□□ -0.9
SUPT16H-208ENST00000557652 HSBP1O75506 76 aa9.41□□□□□ -0.9
SUPT16H-208ENST00000557652 TEX43Q6ZNM6 134 aa9.41□□□□□ -0.9
SUPT16H-208ENST00000557652 URB1-AS1Q96HZ7 61 aa9.41□□□□□ -0.9
SUPT16H-208ENST00000557652 SCGB3A1Q96QR1 104 aa9.41□□□□□ -0.9
SUPT16H-208ENST00000557652 IGLV4-3A0A075B6K6 122 aa9.4□□□□□ -0.9
SUPT16H-208ENST00000557652 LINC00959A0A1B0GUT2 108 aa9.4□□□□□ -0.9
SUPT16H-208ENST00000557652 ATP5LO75964 103 aa9.4□□□□□ -0.9
SUPT16H-208ENST00000557652 C14orf177Q52M58 125 aa9.4□□□□□ -0.9
SUPT16H-208ENST00000557652 Q6ZUT4 128 aa9.4□□□□□ -0.9
SUPT16H-208ENST00000557652 AMELXQ99217 191 aa9.4□□□□□ -0.9
SUPT16H-208ENST00000557652 VCX2Q9H322 139 aa9.4□□□□□ -0.9
SUPT16H-208ENST00000557652 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.39□□□□□ -0.91
SUPT16H-208ENST00000557652 HIST1H2BKO60814 126 aa9.39□□□□□ -0.91
SUPT16H-208ENST00000557652 HIST1H2BJP06899 126 aa9.39□□□□□ -0.91
SUPT16H-208ENST00000557652 HIST1H2BOP23527 126 aa9.39□□□□□ -0.91
SUPT16H-208ENST00000557652 HIST1H2BBP33778 126 aa9.39□□□□□ -0.91
SUPT16H-208ENST00000557652 HIST1H2BDP58876 126 aa9.39□□□□□ -0.91
SUPT16H-208ENST00000557652 HIST1H2BCP62807 126 aa9.39□□□□□ -0.91
SUPT16H-208ENST00000557652 SEC11AP67812 179 aa9.39□□□□□ -0.91
SUPT16H-208ENST00000557652 HIST2H2BEQ16778 126 aa9.39□□□□□ -0.91
SUPT16H-208ENST00000557652 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.39□□□□□ -0.91
SUPT16H-208ENST00000557652 CLPSL2Q6UWE3 100 aa9.39□□□□□ -0.91
SUPT16H-208ENST00000557652 HIST1H2BHQ93079 126 aa9.39□□□□□ -0.91
SUPT16H-208ENST00000557652 HIST1H2BNQ99877 126 aa9.39□□□□□ -0.91
SUPT16H-208ENST00000557652 HIST1H2BMQ99879 126 aa9.39□□□□□ -0.91
SUPT16H-208ENST00000557652 PDZD11Q5EBL8 140 aa9.38□□□□□ -0.91
SUPT16H-208ENST00000557652 CD164L2Q6UWJ8 174 aa9.38□□□□□ -0.91
SUPT16H-208ENST00000557652 CHCHD10Q8WYQ3 142 aaPredicted RBP9.38□□□□□ -0.91
SUPT16H-208ENST00000557652 FAM104AQ969W3 186 aa9.38□□□□□ -0.91
SUPT16H-208ENST00000557652 FRAS1Q86XX4 4008 aa9.37□□□□□ -0.91
SUPT16H-208ENST00000557652 A0A096LNJ9 63 aa9.37□□□□□ -0.91
SUPT16H-208ENST00000557652 IFITM10A6NMD0 228 aa9.37□□□□□ -0.91
SUPT16H-208ENST00000557652 COA6Q5JTJ3 125 aaKnown RBP9.37□□□□□ -0.91
SUPT16H-208ENST00000557652 CFAP161Q6P656 301 aa9.37□□□□□ -0.91
SUPT16H-208ENST00000557652 KRTAP26-1Q6PEX3 210 aa9.37□□□□□ -0.91
SUPT16H-208ENST00000557652 FAM19A3Q7Z5A8 133 aa9.37□□□□□ -0.91
SUPT16H-208ENST00000557652 PACRGQ96M98 296 aaPredicted RBP9.37□□□□□ -0.91
SUPT16H-208ENST00000557652 A0A087WTM6 91 aa9.36□□□□□ -0.91
SUPT16H-208ENST00000557652 IGKV3OR2-268A0A0C4DH90 116 aa9.36□□□□□ -0.91
SUPT16H-208ENST00000557652 LRCOL1A6NCL2 159 aa9.36□□□□□ -0.91
SUPT16H-208ENST00000557652 SERF1AO75920 110 aa9.36□□□□□ -0.91
SUPT16H-208ENST00000557652 TNP2Q05952 138 aa9.36□□□□□ -0.91
SUPT16H-208ENST00000557652 RYR3Q15413 4870 aa9.36□□□□□ -0.91
SUPT16H-208ENST00000557652 IGLV10-54A0A075B6I4 117 aa9.35□□□□□ -0.91
SUPT16H-208ENST00000557652 TRAV13-1A0A0B4J241 112 aa9.35□□□□□ -0.91
SUPT16H-208ENST00000557652 CDPF1Q6NVV7 123 aa9.35□□□□□ -0.91
SUPT16H-208ENST00000557652 NTN5Q8WTR8 489 aaPredicted RBP9.35□□□□□ -0.91
SUPT16H-208ENST00000557652 GAGE12HA6NDE8 117 aa9.34□□□□□ -0.91
SUPT16H-208ENST00000557652 UBE2D1P51668 147 aa9.34□□□□□ -0.91
SUPT16H-208ENST00000557652 PMVKQ15126 192 aa9.34□□□□□ -0.91
SUPT16H-208ENST00000557652 LINC00173Q6ZV60 143 aa9.34□□□□□ -0.91
SUPT16H-208ENST00000557652 LINC01561Q8N1V8 128 aa9.34□□□□□ -0.91
SUPT16H-208ENST00000557652 OPRPNQ99935 248 aaPredicted RBP9.34□□□□□ -0.91
SUPT16H-208ENST00000557652 DNAH10Q8IVF4 4471 aa9.33□□□□□ -0.92
SUPT16H-208ENST00000557652 DNAH17Q9UFH2 4485 aa9.33□□□□□ -0.92
SUPT16H-208ENST00000557652 XCL1P47992 114 aa9.33□□□□□ -0.92
SUPT16H-208ENST00000557652 LINC00310P59036 64 aa9.33□□□□□ -0.92
SUPT16H-208ENST00000557652 FOXI1Q12951 378 aa9.33□□□□□ -0.92
SUPT16H-208ENST00000557652 RNASE13Q5GAN3 156 aaKnown RBP9.33□□□□□ -0.92
SUPT16H-208ENST00000557652 MAPKAPK5-AS1Q8N8E1 139 aa9.33□□□□□ -0.92
SUPT16H-208ENST00000557652 PGPEP1Q9NXJ5 209 aa9.33□□□□□ -0.92
SUPT16H-208ENST00000557652 HSPB8Q9UJY1 196 aa9.33□□□□□ -0.92
SUPT16H-208ENST00000557652 IGHV3OR16-9A0A0B4J2B5 98 aa9.32□□□□□ -0.92
SUPT16H-208ENST00000557652 A0A1B0GVY2 172 aa9.32□□□□□ -0.92
SUPT16H-208ENST00000557652 COX7A2LO14548 114 aa9.32□□□□□ -0.92
SUPT16H-208ENST00000557652 LEPROTL1O95214 131 aa9.32□□□□□ -0.92
SUPT16H-208ENST00000557652 APOMO95445 188 aa9.32□□□□□ -0.92
SUPT16H-208ENST00000557652 HERVK_113P63121 156 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms