RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 TIMM17AQ99595 171 aa7.32□□□□□ -1.24
PRKCH-227ENST00000557599 KRTAP17-1Q9BYP8 105 aa7.32□□□□□ -1.24
PRKCH-227ENST00000557599 DNAH11Q96DT5 4516 aa7.32□□□□□ -1.24
PRKCH-227ENST00000557599 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.31□□□□□ -1.24
PRKCH-227ENST00000557599 IGKV2-29A2NJV5 120 aaPredicted RBP7.31□□□□□ -1.24
PRKCH-227ENST00000557599 TMEM262E9PQX1 116 aa7.31□□□□□ -1.24
PRKCH-227ENST00000557599 ZNF25P17030 456 aaPredicted RBP7.31□□□□□ -1.24
PRKCH-227ENST00000557599 LELP1Q5T871 98 aa7.31□□□□□ -1.24
PRKCH-227ENST00000557599 LGALS9CQ6DKI2 356 aa7.31□□□□□ -1.24
PRKCH-227ENST00000557599 OR5A1Q8NGJ0 315 aa7.31□□□□□ -1.24
PRKCH-227ENST00000557599 CHCHD7Q9BUK0 85 aa7.31□□□□□ -1.24
PRKCH-227ENST00000557599 TIMM21Q9BVV7 248 aa7.31□□□□□ -1.24
PRKCH-227ENST00000557599 A0A096LNJ9 63 aa7.3□□□□□ -1.24
PRKCH-227ENST00000557599 H0Y8G0 127 aa7.3□□□□□ -1.24
PRKCH-227ENST00000557599 LY6G6CO95867 125 aa7.3□□□□□ -1.24
PRKCH-227ENST00000557599 CCL18P55774 89 aa7.3□□□□□ -1.24
PRKCH-227ENST00000557599 TCTAP57738 103 aa7.3□□□□□ -1.24
PRKCH-227ENST00000557599 RPL39P62891 51 aaKnown RBP7.3□□□□□ -1.24
PRKCH-227ENST00000557599 PET117Q6UWS5 81 aa7.3□□□□□ -1.24
PRKCH-227ENST00000557599 C2orf88Q9BSF0 95 aa7.3□□□□□ -1.24
PRKCH-227ENST00000557599 PYGO1Q9Y3Y4 419 aa7.3□□□□□ -1.24
PRKCH-227ENST00000557599 A0A087WX48 190 aa7.29□□□□□ -1.24
PRKCH-227ENST00000557599 SCGB1D1O95968 90 aa7.29□□□□□ -1.24
PRKCH-227ENST00000557599 FGF6P10767 208 aa7.29□□□□□ -1.24
PRKCH-227ENST00000557599 GAGE6Q13070 117 aa7.29□□□□□ -1.24
PRKCH-227ENST00000557599 NTM-AS1Q6ZSK4 140 aa7.29□□□□□ -1.24
PRKCH-227ENST00000557599 VCX2Q9H322 139 aa7.29□□□□□ -1.24
PRKCH-227ENST00000557599 IFITM10A6NMD0 228 aa7.28□□□□□ -1.24
PRKCH-227ENST00000557599 SYS1-DBNDD2H3BUS1 97 aa7.28□□□□□ -1.24
PRKCH-227ENST00000557599 C3orf79P0CE67 100 aa7.28□□□□□ -1.24
PRKCH-227ENST00000557599 LYPD5Q6UWN5 251 aa7.28□□□□□ -1.24
PRKCH-227ENST00000557599 TEX43Q6ZNM6 134 aa7.28□□□□□ -1.24
PRKCH-227ENST00000557599 MRPL52Q86TS9 123 aaKnown RBP7.28□□□□□ -1.24
PRKCH-227ENST00000557599 UBE2D4Q9Y2X8 147 aa7.28□□□□□ -1.24
PRKCH-227ENST00000557599 CSDC2Q9Y534 153 aaKnown RBP7.28□□□□□ -1.24
PRKCH-227ENST00000557599 TRAV12-1A0A0B4J245 112 aa7.27□□□□□ -1.25
PRKCH-227ENST00000557599 LOC105371267A0A1B0GV96 52 aa7.27□□□□□ -1.25
PRKCH-227ENST00000557599 IGIPA6NJ69 53 aa7.27□□□□□ -1.25
PRKCH-227ENST00000557599 MRPS36P82909 103 aaKnown RBP7.27□□□□□ -1.25
PRKCH-227ENST00000557599 PMVKQ15126 192 aa7.27□□□□□ -1.25
PRKCH-227ENST00000557599 UBE2DNLQ8IWF7 75 aa7.27□□□□□ -1.25
PRKCH-227ENST00000557599 LINC00173Q6ZV60 143 aa7.26□□□□□ -1.25
PRKCH-227ENST00000557599 SPATA12Q7Z6I5 190 aa7.26□□□□□ -1.25
PRKCH-227ENST00000557599 IGLV4-3A0A075B6K6 122 aa7.25□□□□□ -1.25
PRKCH-227ENST00000557599 A0A1B0GUV1 79 aa7.25□□□□□ -1.25
PRKCH-227ENST00000557599 HSBP1L1C9JCN9 74 aa7.25□□□□□ -1.25
PRKCH-227ENST00000557599 SMIM6P0DI80 62 aa7.25□□□□□ -1.25
PRKCH-227ENST00000557599 SEC11AP67812 179 aa7.25□□□□□ -1.25
PRKCH-227ENST00000557599 JOSD1Q15040 202 aaPredicted RBP7.25□□□□□ -1.25
PRKCH-227ENST00000557599 BAALCQ8WXS3 180 aa7.25□□□□□ -1.25
PRKCH-227ENST00000557599 APLNQ9ULZ1 77 aa7.25□□□□□ -1.25
PRKCH-227ENST00000557599 CHTOPQ9Y3Y2 248 aaKnown RBP7.25□□□□□ -1.25
PRKCH-227ENST00000557599 RYR1P21817 5038 aa7.24□□□□□ -1.25
PRKCH-227ENST00000557599 PLNP26678 52 aa7.24□□□□□ -1.25
PRKCH-227ENST00000557599 RBX1P62877 108 aa7.24□□□□□ -1.25
PRKCH-227ENST00000557599 S100A12P80511 92 aa7.24□□□□□ -1.25
PRKCH-227ENST00000557599 ESRGQ1W209 222 aa7.24□□□□□ -1.25
PRKCH-227ENST00000557599 Q6ZUT4 128 aa7.24□□□□□ -1.25
PRKCH-227ENST00000557599 ZNF664Q8N3J9 261 aa7.24□□□□□ -1.25
PRKCH-227ENST00000557599 MRPS16Q9Y3D3 137 aaKnown RBP7.24□□□□□ -1.25
PRKCH-227ENST00000557599 PRSS29PA6NIE9 313 aa7.23□□□□□ -1.25
PRKCH-227ENST00000557599 F8VRH5 84 aa7.23□□□□□ -1.25
PRKCH-227ENST00000557599 DPM2O94777 84 aa7.23□□□□□ -1.25
PRKCH-227ENST00000557599 CRPP02741 224 aa7.23□□□□□ -1.25
PRKCH-227ENST00000557599 ANGP03950 147 aaKnown RBP7.23□□□□□ -1.25
PRKCH-227ENST00000557599 LINC01545Q5VT33 79 aa7.23□□□□□ -1.25
PRKCH-227ENST00000557599 CST9LQ9H4G1 147 aa7.23□□□□□ -1.25
PRKCH-227ENST00000557599 GEMIN7Q9H840 131 aaKnown RBP7.23□□□□□ -1.25
PRKCH-227ENST00000557599 ABCA13Q86UQ4 5058 aa7.23□□□□□ -1.25
PRKCH-227ENST00000557599 TRAV9-2A0A087WT02 112 aa7.22□□□□□ -1.25
PRKCH-227ENST00000557599 CCL25O15444 150 aa7.22□□□□□ -1.25
PRKCH-227ENST00000557599 IGKCP01834 107 aa7.22□□□□□ -1.25
PRKCH-227ENST00000557599 ODF1Q14990 250 aa7.22□□□□□ -1.25
PRKCH-227ENST00000557599 SS18Q15532 418 aa7.22□□□□□ -1.25
PRKCH-227ENST00000557599 MPV17L2Q567V2 206 aa7.22□□□□□ -1.25
PRKCH-227ENST00000557599 AMELXQ99217 191 aa7.22□□□□□ -1.25
PRKCH-227ENST00000557599 CDC42SE2Q9NRR3 84 aa7.22□□□□□ -1.25
PRKCH-227ENST00000557599 TRAV13-1A0A0B4J241 112 aa7.21□□□□□ -1.26
PRKCH-227ENST00000557599 IGKV3OR2-268A0A0C4DH90 116 aa7.21□□□□□ -1.26
PRKCH-227ENST00000557599 SIVA1O15304 175 aa7.21□□□□□ -1.26
PRKCH-227ENST00000557599 HERVK_113P61574 105 aa7.21□□□□□ -1.26
PRKCH-227ENST00000557599 RNASE13Q5GAN3 156 aaKnown RBP7.21□□□□□ -1.26
PRKCH-227ENST00000557599 C10orf126Q8N4M7 172 aa7.21□□□□□ -1.26
PRKCH-227ENST00000557599 Q8N976 141 aa7.21□□□□□ -1.26
PRKCH-227ENST00000557599 OPRPNQ99935 248 aaPredicted RBP7.21□□□□□ -1.26
PRKCH-227ENST00000557599 MRPL35Q9NZE8 188 aaKnown RBP7.21□□□□□ -1.26
PRKCH-227ENST00000557599 IGLV4-60A0A075B6I1 120 aa7.2□□□□□ -1.26
PRKCH-227ENST00000557599 A0A1B0GVY2 172 aa7.2□□□□□ -1.26
PRKCH-227ENST00000557599 H3BRM9 83 aa7.2□□□□□ -1.26
PRKCH-227ENST00000557599 IGHV3-30P01768 117 aa7.2□□□□□ -1.26
PRKCH-227ENST00000557599 IGHV3-33P01772 117 aa7.2□□□□□ -1.26
PRKCH-227ENST00000557599 IGHV3-30-3P0DP02 117 aa7.2□□□□□ -1.26
PRKCH-227ENST00000557599 IGHV3-30-5P0DP03 117 aa7.2□□□□□ -1.26
PRKCH-227ENST00000557599 PYY3Q5JQD4 70 aa7.2□□□□□ -1.26
PRKCH-227ENST00000557599 LINC01556Q5JQF7 62 aa7.2□□□□□ -1.26
PRKCH-227ENST00000557599 WFDC10BQ8IUB3 73 aa7.2□□□□□ -1.26
PRKCH-227ENST00000557599 PMCHL2Q9BQD1 86 aa7.2□□□□□ -1.26
PRKCH-227ENST00000557599 UPK3BQ9BT76 320 aa7.2□□□□□ -1.26
PRKCH-227ENST00000557599 CHAC1Q9BUX1 264 aa7.2□□□□□ -1.26
PRKCH-227ENST00000557599 VAMP8Q9BV40 100 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms