RNA–Protein interactions for RNA: ENST00000557320.5

PAPOLA-223, Transcript of poly(A) polymerase alpha, humanhuman

TSL 1 (best) BASIC

Gene PAPOLA, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-223ENST00000557320 LY6G5BQ8NDX9 201 aa11.04□□□□□ -0.64
PAPOLA-223ENST00000557320 HRNRQ86YZ3 2850 aaPredicted RBP11.03□□□□□ -0.64
PAPOLA-223ENST00000557320 CLPSL1A2RUU4 121 aa11.03□□□□□ -0.64
PAPOLA-223ENST00000557320 E7EQL1 145 aa11.03□□□□□ -0.64
PAPOLA-223ENST00000557320 TRAV12-2A0A075B6T6 113 aa11.03□□□□□ -0.64
PAPOLA-223ENST00000557320 UNC79Q9P2D8 2635 aa11.03□□□□□ -0.64
PAPOLA-223ENST00000557320 IGLV4-3A0A075B6K6 122 aa11.03□□□□□ -0.64
PAPOLA-223ENST00000557320 IGHV3OR16-10A0A075B7F0 116 aa11.03□□□□□ -0.64
PAPOLA-223ENST00000557320 IGHG2P01859 326 aa11.03□□□□□ -0.64
PAPOLA-223ENST00000557320 LINC01561Q8N1V8 128 aa11.03□□□□□ -0.64
PAPOLA-223ENST00000557320 LINC00846Q9NV44 126 aa11.03□□□□□ -0.64
PAPOLA-223ENST00000557320 IGHV4OR15-8A0A075B7B6 117 aa11.02□□□□□ -0.65
PAPOLA-223ENST00000557320 A0A087WW49 117 aa11.02□□□□□ -0.65
PAPOLA-223ENST00000557320 C11orf71Q6IPW1 123 aa11.02□□□□□ -0.65
PAPOLA-223ENST00000557320 F6UB75 175 aa11.01□□□□□ -0.65
PAPOLA-223ENST00000557320 RNASE3P12724 160 aaKnown RBP11.01□□□□□ -0.65
PAPOLA-223ENST00000557320 C20orf203Q8NBC4 194 aa11.01□□□□□ -0.65
PAPOLA-223ENST00000557320 WFDC9Q8NEX5 89 aa11.01□□□□□ -0.65
PAPOLA-223ENST00000557320 SORL1Q92673 2214 aa11.01□□□□□ -0.65
PAPOLA-223ENST00000557320 TRBV27A0A0K0K1C4 114 aa11.01□□□□□ -0.65
PAPOLA-223ENST00000557320 HILS1P60008 231 aa11.01□□□□□ -0.65
PAPOLA-223ENST00000557320 Q8N2B8 174 aa11.01□□□□□ -0.65
PAPOLA-223ENST00000557320 RNF5Q99942 180 aa11.01□□□□□ -0.65
PAPOLA-223ENST00000557320 HECTD1Q9ULT8 2610 aa11.01□□□□□ -0.65
PAPOLA-223ENST00000557320 Q6JHZ5 121 aa11.01□□□□□ -0.65
PAPOLA-223ENST00000557320 MUC4Q99102 2169 aa11□□□□□ -0.65
PAPOLA-223ENST00000557320 KNCNA6PVL3 124 aa11□□□□□ -0.65
PAPOLA-223ENST00000557320 ZFAND2AQ8N6M9 145 aa11□□□□□ -0.65
PAPOLA-223ENST00000557320 C2CD3Q4AC94 2353 aa11□□□□□ -0.65
PAPOLA-223ENST00000557320 RBM3P98179 157 aaKnown RBP10.99□□□□□ -0.65
PAPOLA-223ENST00000557320 SERP1Q9Y6X1 66 aa10.99□□□□□ -0.65
PAPOLA-223ENST00000557320 VSIG2Q96IQ7 327 aa10.99□□□□□ -0.65
PAPOLA-223ENST00000557320 CYSRT1A8MQ03 144 aa10.98□□□□□ -0.65
PAPOLA-223ENST00000557320 DPM3Q9P2X0 92 aa10.98□□□□□ -0.65
PAPOLA-223ENST00000557320 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.98□□□□□ -0.652e-6■■■■■ 45.6
PAPOLA-223ENST00000557320 LINC00315P59091 139 aa10.97□□□□□ -0.65
PAPOLA-223ENST00000557320 LINC00308Q8TCZ7 52 aa10.97□□□□□ -0.65
PAPOLA-223ENST00000557320 FAM218AQ96MZ4 157 aa10.97□□□□□ -0.65
PAPOLA-223ENST00000557320 CCL19Q99731 98 aa10.97□□□□□ -0.65
PAPOLA-223ENST00000557320 CELSR2Q9HCU4 2923 aa10.97□□□□□ -0.65
PAPOLA-223ENST00000557320 DCHS2Q6V1P9 2916 aa10.97□□□□□ -0.65
PAPOLA-223ENST00000557320 PDZD2O15018 2839 aa10.97□□□□□ -0.65
PAPOLA-223ENST00000557320 TRBV12-3P01733 135 aa10.97□□□□□ -0.65
PAPOLA-223ENST00000557320 APCP25054 2843 aa10.97□□□□□ -0.65
PAPOLA-223ENST00000557320 SOCS3O14543 225 aa10.96□□□□□ -0.65
PAPOLA-223ENST00000557320 XCL1P47992 114 aa10.96□□□□□ -0.65
PAPOLA-223ENST00000557320 Q9H8V8 135 aa10.96□□□□□ -0.65
PAPOLA-223ENST00000557320 XCL2Q9UBD3 114 aa10.96□□□□□ -0.65
PAPOLA-223ENST00000557320 LENEPQ9Y5L5 61 aa10.96□□□□□ -0.65
PAPOLA-223ENST00000557320 NDUFC2-KCTD14E9PQ53 114 aa10.96□□□□□ -0.66
PAPOLA-223ENST00000557320 LYNX1G3V0Z9 82 aa10.96□□□□□ -0.66
PAPOLA-223ENST00000557320 LYNX1P0DP58 116 aa10.96□□□□□ -0.66
PAPOLA-223ENST00000557320 MRPL53Q96EL3 112 aaKnown RBP10.96□□□□□ -0.66
PAPOLA-223ENST00000557320 C20orf173Q96LM9 149 aa10.96□□□□□ -0.66
PAPOLA-223ENST00000557320 SMIM26A0A096LP01 95 aa10.96□□□□□ -0.66
PAPOLA-223ENST00000557320 DEFB113Q30KQ7 82 aa10.96□□□□□ -0.66
PAPOLA-223ENST00000557320 KIF25-AS1Q9Y6Z4 181 aa10.96□□□□□ -0.66
PAPOLA-223ENST00000557320 CRYBG3Q68DQ2 2970 aa10.95□□□□□ -0.66
PAPOLA-223ENST00000557320 NOTCH3Q9UM47 2321 aa10.95□□□□□ -0.66
PAPOLA-223ENST00000557320 FAM222AQ5U5X8 452 aa10.95□□□□□ -0.66
PAPOLA-223ENST00000557320 UBE2D4Q9Y2X8 147 aa10.94□□□□□ -0.66
PAPOLA-223ENST00000557320 IGHV3-73A0A0B4J1V6 119 aa10.94□□□□□ -0.66
PAPOLA-223ENST00000557320 LY6LH3BQJ8 138 aa10.94□□□□□ -0.66
PAPOLA-223ENST00000557320 DGAT2L7PQ6IED9 249 aa10.94□□□□□ -0.66
PAPOLA-223ENST00000557320 CSMD1Q96PZ7 3565 aa10.93□□□□□ -0.66
PAPOLA-223ENST00000557320 NCR3O14931 201 aa10.93□□□□□ -0.66
PAPOLA-223ENST00000557320 MED14OSP0DP75 135 aa10.93□□□□□ -0.66
PAPOLA-223ENST00000557320 KRTAP1-3Q8IUG1 177 aa10.93□□□□□ -0.66
PAPOLA-223ENST00000557320 COPS9Q8WXC6 57 aa10.93□□□□□ -0.66
PAPOLA-223ENST00000557320 SNURFQ9Y675 71 aa10.93□□□□□ -0.66
PAPOLA-223ENST00000557320 IGKV3-20P01619 116 aa10.92□□□□□ -0.66
PAPOLA-223ENST00000557320 MRPS36P82909 103 aaKnown RBP10.92□□□□□ -0.66
PAPOLA-223ENST00000557320 RPL28P46779 137 aaKnown RBP10.92□□□□□ -0.66
PAPOLA-223ENST00000557320 ENHOQ6UWT2 76 aa10.92□□□□□ -0.66
PAPOLA-223ENST00000557320 FAM19A1Q7Z5A9 133 aa10.92□□□□□ -0.66
PAPOLA-223ENST00000557320 KLK9Q9UKQ9 250 aa10.92□□□□□ -0.66
PAPOLA-223ENST00000557320 M0QY20 66 aa10.91□□□□□ -0.66
PAPOLA-223ENST00000557320 C9orf129Q5T035 196 aaKnown RBP10.91□□□□□ -0.66
PAPOLA-223ENST00000557320 CDKN2A-AS1Q9UH64 79 aa10.91□□□□□ -0.66
PAPOLA-223ENST00000557320 MPLKIPQ8TAP9 179 aa10.91□□□□□ -0.66
PAPOLA-223ENST00000557320 TRBV6-5A0A0K0K1A5 114 aa10.9□□□□□ -0.66
PAPOLA-223ENST00000557320 CRPP02741 224 aa10.9□□□□□ -0.66
PAPOLA-223ENST00000557320 HTN1P15515 57 aa10.9□□□□□ -0.66
PAPOLA-223ENST00000557320 LINC00474Q9P2X8 69 aa10.9□□□□□ -0.66
PAPOLA-223ENST00000557320 C22orf24Q9Y442 160 aa10.9□□□□□ -0.67
PAPOLA-223ENST00000557320 BEAN1Q3B7T3 259 aa10.89□□□□□ -0.67
PAPOLA-223ENST00000557320 CENPEQ02224 2701 aa10.89□□□□□ -0.67
PAPOLA-223ENST00000557320 TIMM17BO60830 172 aa10.89□□□□□ -0.67
PAPOLA-223ENST00000557320 PSMB8P28062 276 aa10.89□□□□□ -0.67
PAPOLA-223ENST00000557320 PIK3CD-AS1Q5SR53 167 aa10.89□□□□□ -0.67
PAPOLA-223ENST00000557320 HIST2H2BDQ6DRA6 164 aa10.89□□□□□ -0.67
PAPOLA-223ENST00000557320 RNASE1P07998 156 aaKnown RBP10.89□□□□□ -0.67
PAPOLA-223ENST00000557320 NPBQ8NG41 125 aa10.89□□□□□ -0.67
PAPOLA-223ENST00000557320 KAAG1Q9UBP8 84 aa10.88□□□□□ -0.67
PAPOLA-223ENST00000557320 ANKRD17O75179 2603 aaKnown RBP10.88□□□□□ -0.67
PAPOLA-223ENST00000557320 AKAP9Q99996 3911 aa10.88□□□□□ -0.67
PAPOLA-223ENST00000557320 ITPR2Q14571 2701 aa10.88□□□□□ -0.67
PAPOLA-223ENST00000557320 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.88□□□□□ -0.67
PAPOLA-223ENST00000557320 IGKV2-29A2NJV5 120 aaPredicted RBP10.88□□□□□ -0.67
PAPOLA-223ENST00000557320 G3V318 75 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms