RNA–Protein interactions for RNA: ENST00000557294.5

PRKCH-223, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-223	ENST00000557294	TSPAN13	O95857	204 aa		10.91	□□□□□ -0.66
PRKCH-223	ENST00000557294	IFNA1	P01562	189 aa		10.91	□□□□□ -0.66
PRKCH-223	ENST00000557294	RNF151	Q2KHN1	245 aa		10.91	□□□□□ -0.66
PRKCH-223	ENST00000557294	OPRPN	Q99935	248 aa	Predicted RBP	10.91	□□□□□ -0.66
PRKCH-223	ENST00000557294	SDHAF1	A6NFY7	115 aa		10.9	□□□□□ -0.66
PRKCH-223	ENST00000557294	COX7A2L	O14548	114 aa		10.9	□□□□□ -0.66
PRKCH-223	ENST00000557294	BCL2L11	O43521	198 aa		10.9	□□□□□ -0.66
PRKCH-223	ENST00000557294	ESD	P10768	282 aa		10.9	□□□□□ -0.66
PRKCH-223	ENST00000557294	TWIST1	Q15672	202 aa		10.9	□□□□□ -0.66
PRKCH-223	ENST00000557294	FXYD6-FXYD2	A0A087WZ82	144 aa		10.89	□□□□□ -0.67
PRKCH-223	ENST00000557294		I3L3M4	83 aa		10.89	□□□□□ -0.67
PRKCH-223	ENST00000557294	LCE2D	Q5TA82	110 aa	Predicted RBP	10.89	□□□□□ -0.67
PRKCH-223	ENST00000557294	CYTL1	Q9NRR1	136 aa		10.89	□□□□□ -0.67
PRKCH-223	ENST00000557294	C1orf196	B1AJZ1	125 aa		10.88	□□□□□ -0.67
PRKCH-223	ENST00000557294	PMCH	P20382	165 aa		10.88	□□□□□ -0.67
PRKCH-223	ENST00000557294	TEX261	Q6UWH6	196 aa		10.88	□□□□□ -0.67
PRKCH-223	ENST00000557294	MRPL52	Q86TS9	123 aa	Known RBP	10.88	□□□□□ -0.67
PRKCH-223	ENST00000557294	CNFN	Q9BYD5	112 aa		10.88	□□□□□ -0.67
PRKCH-223	ENST00000557294	CRCT1	Q9UGL9	99 aa		10.88	□□□□□ -0.67
PRKCH-223	ENST00000557294	FAM168B	A1KXE4	195 aa		10.87	□□□□□ -0.67
PRKCH-223	ENST00000557294	KCNRG	Q8N5I3	272 aa		10.87	□□□□□ -0.67
PRKCH-223	ENST00000557294		A0A1B0GV50	99 aa		10.86	□□□□□ -0.67
PRKCH-223	ENST00000557294	CTRL	P40313	264 aa		10.86	□□□□□ -0.67
PRKCH-223	ENST00000557294	CENPW	Q5EE01	88 aa		10.86	□□□□□ -0.67
PRKCH-223	ENST00000557294	FAM210A	Q96ND0	272 aa		10.86	□□□□□ -0.67
PRKCH-223	ENST00000557294		G3V3Q6	166 aa		10.85	□□□□□ -0.67
PRKCH-223	ENST00000557294	C11orf52	Q96A22	123 aa		10.85	□□□□□ -0.67
PRKCH-223	ENST00000557294	SMIM12	Q96EX1	92 aa		10.85	□□□□□ -0.67
PRKCH-223	ENST00000557294	MRAP2	Q96G30	205 aa		10.85	□□□□□ -0.67
PRKCH-223	ENST00000557294	IMMP2L	Q96T52	175 aa		10.85	□□□□□ -0.67
PRKCH-223	ENST00000557294	TRBV6-5	A0A0K0K1A5	114 aa		10.83	□□□□□ -0.68
PRKCH-223	ENST00000557294	TSHB	P01222	138 aa		10.83	□□□□□ -0.68
PRKCH-223	ENST00000557294	RGS21	Q2M5E4	152 aa		10.83	□□□□□ -0.68
PRKCH-223	ENST00000557294	FAM213B	Q8TBF2	198 aa		10.83	□□□□□ -0.68
PRKCH-223	ENST00000557294	RPP21	Q9H633	154 aa	Known RBP	10.83	□□□□□ -0.68
PRKCH-223	ENST00000557294	MRPL35	Q9NZE8	188 aa	Known RBP	10.83	□□□□□ -0.68
PRKCH-223	ENST00000557294	RAB19	A4D1S5	217 aa		10.82	□□□□□ -0.68
PRKCH-223	ENST00000557294	FOXA3	P55318	350 aa	Predicted RBP	10.82	□□□□□ -0.68
PRKCH-223	ENST00000557294	C5orf38	Q86SI9	138 aa		10.82	□□□□□ -0.68
PRKCH-223	ENST00000557294	UMAD1	C9J7I0	102 aa		10.81	□□□□□ -0.68
PRKCH-223	ENST00000557294	TLX1NB	P0CAT3	122 aa		10.81	□□□□□ -0.68
PRKCH-223	ENST00000557294	GNG4	P50150	75 aa		10.81	□□□□□ -0.68
PRKCH-223	ENST00000557294	CCL20	P78556	96 aa		10.81	□□□□□ -0.68
PRKCH-223	ENST00000557294	SPAG11B	Q08648	103 aa		10.81	□□□□□ -0.68
PRKCH-223	ENST00000557294	SMIM15	Q7Z3B0	74 aa		10.81	□□□□□ -0.68
PRKCH-223	ENST00000557294	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	10.81	□□□□□ -0.68
PRKCH-223	ENST00000557294	KRTAP7-1	Q8IUC3	87 aa		10.81	□□□□□ -0.68
PRKCH-223	ENST00000557294	BIN3	Q9NQY0	253 aa		10.81	□□□□□ -0.68
PRKCH-223	ENST00000557294		F8WDY8	70 aa		10.8	□□□□□ -0.68
PRKCH-223	ENST00000557294	ARPC5	O15511	151 aa		10.8	□□□□□ -0.68
PRKCH-223	ENST00000557294	H2AFB1	P0C5Y9	115 aa		10.8	□□□□□ -0.68
PRKCH-223	ENST00000557294	UBE2B	P63146	152 aa		10.8	□□□□□ -0.68
PRKCH-223	ENST00000557294	NUDT10	Q8NFP7	164 aa		10.8	□□□□□ -0.68
PRKCH-223	ENST00000557294	NUDT11	Q96G61	164 aa		10.8	□□□□□ -0.68
PRKCH-223	ENST00000557294	TMEM242	Q9NWH2	141 aa		10.8	□□□□□ -0.68
PRKCH-223	ENST00000557294	ZNF861P	O60384	105 aa		10.79	□□□□□ -0.68
PRKCH-223	ENST00000557294	TMEM241	Q24JQ0	296 aa		10.79	□□□□□ -0.68
PRKCH-223	ENST00000557294	OR10D4P	Q8NGN7	298 aa		10.79	□□□□□ -0.68
PRKCH-223	ENST00000557294	ST20	Q9HBF5	79 aa		10.79	□□□□□ -0.68
PRKCH-223	ENST00000557294	CSDC2	Q9Y534	153 aa	Known RBP	10.79	□□□□□ -0.68
PRKCH-223	ENST00000557294	CDIP1	Q9H305	208 aa		10.78	□□□□□ -0.68
PRKCH-223	ENST00000557294	TRAV13-1	A0A0B4J241	112 aa		10.77	□□□□□ -0.69
PRKCH-223	ENST00000557294	C7orf77	A4D0Y5	90 aa		10.77	□□□□□ -0.69
PRKCH-223	ENST00000557294	POLR2K	P53803	58 aa	Known RBP	10.77	□□□□□ -0.69
PRKCH-223	ENST00000557294	RNASE7	Q9H1E1	156 aa	Known RBP	10.77	□□□□□ -0.69
PRKCH-223	ENST00000557294	MANBAL	Q9NQG1	85 aa		10.77	□□□□□ -0.69
PRKCH-223	ENST00000557294		M0QXV9	152 aa		10.76	□□□□□ -0.69
PRKCH-223	ENST00000557294	GAGE2E	Q4V326	116 aa		10.76	□□□□□ -0.69
PRKCH-223	ENST00000557294	GAGE2D	Q9UEU5	116 aa		10.76	□□□□□ -0.69
PRKCH-223	ENST00000557294	TRBV20OR9-2	A0A075B6H5	130 aa		10.75	□□□□□ -0.69
PRKCH-223	ENST00000557294	TRBV27	A0A0K0K1C4	114 aa		10.75	□□□□□ -0.69
PRKCH-223	ENST00000557294	NDUFA1	O15239	70 aa		10.75	□□□□□ -0.69
PRKCH-223	ENST00000557294	C10orf25	Q5T742	122 aa		10.75	□□□□□ -0.69
PRKCH-223	ENST00000557294	GNG13	Q9P2W3	67 aa		10.75	□□□□□ -0.69
PRKCH-223	ENST00000557294		A0A087X002	238 aa		10.74	□□□□□ -0.69
PRKCH-223	ENST00000557294	TPRXL	Q17RH7	258 aa		10.74	□□□□□ -0.69
PRKCH-223	ENST00000557294	RNASE13	Q5GAN3	156 aa	Known RBP	10.74	□□□□□ -0.69
PRKCH-223	ENST00000557294	TYMSOS	Q8TAI1	123 aa		10.74	□□□□□ -0.69
PRKCH-223	ENST00000557294	SMDT1	Q9H4I9	107 aa		10.74	□□□□□ -0.69
PRKCH-223	ENST00000557294	UBE2D4	Q9Y2X8	147 aa		10.74	□□□□□ -0.69
PRKCH-223	ENST00000557294	SMLR1	H3BR10	107 aa		10.73	□□□□□ -0.69
PRKCH-223	ENST00000557294	SMAGP	Q0VAQ4	97 aa		10.73	□□□□□ -0.69
PRKCH-223	ENST00000557294	UNQ6190/PRO20217	Q6UXQ8	127 aa		10.73	□□□□□ -0.69
PRKCH-223	ENST00000557294	ORAOV1	Q8WV07	137 aa		10.73	□□□□□ -0.69
PRKCH-223	ENST00000557294	C6orf48	Q9UBA6	75 aa		10.73	□□□□□ -0.69
PRKCH-223	ENST00000557294	CRYGA	P11844	174 aa		10.72	□□□□□ -0.69
PRKCH-223	ENST00000557294	ZNF345	Q14585	488 aa		10.72	□□□□□ -0.69
PRKCH-223	ENST00000557294	HMSD	A8MTL9	139 aa		10.71	□□□□□ -0.69
PRKCH-223	ENST00000557294	RETNLB	Q9BQ08	111 aa		10.71	□□□□□ -0.69
PRKCH-223	ENST00000557294	MED9	Q9NWA0	146 aa		10.71	□□□□□ -0.69
PRKCH-223	ENST00000557294	PDE6D	O43924	150 aa		10.7	□□□□□ -0.7
PRKCH-223	ENST00000557294	IGHV3OR16-9	A0A0B4J2B5	98 aa		10.69	□□□□□ -0.7
PRKCH-223	ENST00000557294	KANTR	A0A1W2PQU2	76 aa		10.69	□□□□□ -0.7
PRKCH-223	ENST00000557294	VCY	O14598	125 aa		10.69	□□□□□ -0.7
PRKCH-223	ENST00000557294	NUPR1	O60356	82 aa		10.68	□□□□□ -0.7
PRKCH-223	ENST00000557294	FCER1G	P30273	86 aa		10.68	□□□□□ -0.7
PRKCH-223	ENST00000557294	LINC01547	P58512	204 aa	Predicted RBP	10.68	□□□□□ -0.7
PRKCH-223	ENST00000557294	IGLV7-46	A0A075B6I9	117 aa		10.67	□□□□□ -0.7
PRKCH-223	ENST00000557294	C9orf129	Q5T035	196 aa	Known RBP	10.67	□□□□□ -0.7
PRKCH-223	ENST00000557294	TIMM21	Q9BVV7	248 aa		10.67	□□□□□ -0.7

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