RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 SCO1O75880 301 aa13.86□□□□□ -0.19
SEC23A-213ENST00000557280 RAB5AP20339 215 aa13.86□□□□□ -0.19
SEC23A-213ENST00000557280 KRTAP10-2P60368 255 aa13.86□□□□□ -0.19
SEC23A-213ENST00000557280 C1orf43Q9BWL3 253 aa13.86□□□□□ -0.19
SEC23A-213ENST00000557280 BIRC6Q9NR09 4857 aa13.86□□□□□ -0.19
SEC23A-213ENST00000557280 LECT2O14960 151 aa13.85□□□□□ -0.19
SEC23A-213ENST00000557280 BAALCQ8WXS3 180 aa13.85□□□□□ -0.19
SEC23A-213ENST00000557280 RNASE13Q5GAN3 156 aaKnown RBP13.84□□□□□ -0.19
SEC23A-213ENST00000557280 Q6ZUT4 128 aa13.84□□□□□ -0.19
SEC23A-213ENST00000557280 SPATA12Q7Z6I5 190 aa13.84□□□□□ -0.19
SEC23A-213ENST00000557280 FAM104AQ969W3 186 aa13.84□□□□□ -0.19
SEC23A-213ENST00000557280 TMEM101Q96IK0 257 aa13.84□□□□□ -0.19
SEC23A-213ENST00000557280 NXT2Q9NPJ8 142 aaKnown RBP13.84□□□□□ -0.19
SEC23A-213ENST00000557280 CDC42SE2Q9NRR3 84 aa13.84□□□□□ -0.19
SEC23A-213ENST00000557280 DYNC1H1Q14204 4646 aaKnown RBP13.83□□□□□ -0.2
SEC23A-213ENST00000557280 ZNF664Q8N3J9 261 aa13.82□□□□□ -0.2
SEC23A-213ENST00000557280 TMEM18Q96B42 140 aa13.82□□□□□ -0.2
SEC23A-213ENST00000557280 OPRPNQ99935 248 aaPredicted RBP13.82□□□□□ -0.2
SEC23A-213ENST00000557280 COX11Q9Y6N1 276 aa13.82□□□□□ -0.2
SEC23A-213ENST00000557280 TIMM21Q9BVV7 248 aa13.81□□□□□ -0.2
SEC23A-213ENST00000557280 CSDC2Q9Y534 153 aaKnown RBP13.81□□□□□ -0.2
SEC23A-213ENST00000557280 DNAH5Q8TE73 4624 aa13.8□□□□□ -0.2
SEC23A-213ENST00000557280 DGAT2L7PQ6IED9 249 aa13.8□□□□□ -0.2
SEC23A-213ENST00000557280 TRAV8-4A0A0B4J246 113 aa13.79□□□□□ -0.2
SEC23A-213ENST00000557280 Q8N814 137 aa13.79□□□□□ -0.2
SEC23A-213ENST00000557280 PRSS3P2Q8NHM4 247 aa13.79□□□□□ -0.2
SEC23A-213ENST00000557280 C18orf32Q8TCD1 76 aa13.79□□□□□ -0.2
SEC23A-213ENST00000557280 SPANXA1Q9NS26 97 aa13.79□□□□□ -0.2
SEC23A-213ENST00000557280 LINC01546A6NGU7 62 aa13.78□□□□□ -0.2
SEC23A-213ENST00000557280 COLCA2A8K830 154 aa13.78□□□□□ -0.2
SEC23A-213ENST00000557280 ORMDL2Q53FV1 153 aa13.78□□□□□ -0.2
SEC23A-213ENST00000557280 C2orf66Q6UXQ4 117 aa13.78□□□□□ -0.2
SEC23A-213ENST00000557280 URB1-AS1Q96HZ7 61 aa13.78□□□□□ -0.2
SEC23A-213ENST00000557280 LINC00959A0A1B0GUT2 108 aa13.77□□□□□ -0.21
SEC23A-213ENST00000557280 EREGO14944 169 aa13.77□□□□□ -0.21
SEC23A-213ENST00000557280 CHCHD10Q8WYQ3 142 aaPredicted RBP13.77□□□□□ -0.21
SEC23A-213ENST00000557280 GAGE12HA6NDE8 117 aa13.76□□□□□ -0.21
SEC23A-213ENST00000557280 K7EMI3 77 aa13.76□□□□□ -0.21
SEC23A-213ENST00000557280 SMAGPQ0VAQ4 97 aa13.76□□□□□ -0.21
SEC23A-213ENST00000557280 CYSLTR1Q9Y271 337 aa13.76□□□□□ -0.21
SEC23A-213ENST00000557280 USP17L23D6RBM5 183 aa13.75□□□□□ -0.21
SEC23A-213ENST00000557280 IGLV4-3A0A075B6K6 122 aa13.74□□□□□ -0.21
SEC23A-213ENST00000557280 CCL25O15444 150 aa13.74□□□□□ -0.21
SEC23A-213ENST00000557280 TRGC2P03986 189 aa13.74□□□□□ -0.21
SEC23A-213ENST00000557280 XCL1P47992 114 aa13.74□□□□□ -0.21
SEC23A-213ENST00000557280 MRPS36P82909 103 aaKnown RBP13.74□□□□□ -0.21
SEC23A-213ENST00000557280 FA2HQ7L5A8 372 aa13.74□□□□□ -0.21
SEC23A-213ENST00000557280 C16orf90A8MZG2 172 aa13.73□□□□□ -0.21
SEC23A-213ENST00000557280 FOXI1Q12951 378 aa13.73□□□□□ -0.21
SEC23A-213ENST00000557280 PYGO1Q9Y3Y4 419 aa13.73□□□□□ -0.21
SEC23A-213ENST00000557280 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.72□□□□□ -0.21
SEC23A-213ENST00000557280 TRAV13-1A0A0B4J241 112 aa13.72□□□□□ -0.21
SEC23A-213ENST00000557280 ZC2HC1BQ5TFG8 222 aa13.72□□□□□ -0.21
SEC23A-213ENST00000557280 TOMM6Q96B49 74 aa13.72□□□□□ -0.21
SEC23A-213ENST00000557280 LRP1BQ9NZR2 4599 aa13.72□□□□□ -0.21
SEC23A-213ENST00000557280 IGIPA6NJ69 53 aa13.71□□□□□ -0.21
SEC23A-213ENST00000557280 ATP6V1G1O75348 118 aa13.71□□□□□ -0.21
SEC23A-213ENST00000557280 SS18Q15532 418 aa13.7□□□□□ -0.22
SEC23A-213ENST00000557280 LINC00173Q6ZV60 143 aa13.7□□□□□ -0.22
SEC23A-213ENST00000557280 A0A096LNJ9 63 aa13.69□□□□□ -0.22
SEC23A-213ENST00000557280 IFITM10A6NMD0 228 aa13.69□□□□□ -0.22
SEC23A-213ENST00000557280 TMEM141Q96I45 108 aa13.69□□□□□ -0.22
SEC23A-213ENST00000557280 AP5S1Q9NUS5 200 aa13.69□□□□□ -0.22
SEC23A-213ENST00000557280 PGPEP1Q9NXJ5 209 aa13.69□□□□□ -0.22
SEC23A-213ENST00000557280 IGLV5-52A0A0A0MRZ9 124 aa13.68□□□□□ -0.22
SEC23A-213ENST00000557280 PRSS1P07477 247 aa13.68□□□□□ -0.22
SEC23A-213ENST00000557280 LINC00614P0C842 121 aa13.68□□□□□ -0.22
SEC23A-213ENST00000557280 PMCHL1Q16048 86 aa13.68□□□□□ -0.22
SEC23A-213ENST00000557280 CDPF1Q6NVV7 123 aa13.68□□□□□ -0.22
SEC23A-213ENST00000557280 C15orf56Q8N910 161 aa13.68□□□□□ -0.22
SEC23A-213ENST00000557280 CD164L2Q6UWJ8 174 aa13.67□□□□□ -0.22
SEC23A-213ENST00000557280 NTN5Q8WTR8 489 aaPredicted RBP13.67□□□□□ -0.22
SEC23A-213ENST00000557280 C1orf196B1AJZ1 125 aa13.66□□□□□ -0.22
SEC23A-213ENST00000557280 TIMM17AQ99595 171 aa13.66□□□□□ -0.22
SEC23A-213ENST00000557280 TEX43Q6ZNM6 134 aa13.65□□□□□ -0.22
SEC23A-213ENST00000557280 SCGB3A1Q96QR1 104 aa13.65□□□□□ -0.22
SEC23A-213ENST00000557280 AMELXQ99217 191 aa13.65□□□□□ -0.22
SEC23A-213ENST00000557280 G0S2P27469 103 aa13.64□□□□□ -0.23
SEC23A-213ENST00000557280 KRTAP10-1P60331 282 aa13.64□□□□□ -0.23
SEC23A-213ENST00000557280 LINC01620Q4KN68 170 aa13.64□□□□□ -0.23
SEC23A-213ENST00000557280 C14orf177Q52M58 125 aa13.64□□□□□ -0.23
SEC23A-213ENST00000557280 ERASQ7Z444 233 aa13.64□□□□□ -0.23
SEC23A-213ENST00000557280 NPSP0C0P6 89 aa13.63□□□□□ -0.23
SEC23A-213ENST00000557280 S100A1P23297 94 aa13.63□□□□□ -0.23
SEC23A-213ENST00000557280 HIGD2BQ4VC39 106 aa13.63□□□□□ -0.23
SEC23A-213ENST00000557280 Q6ZN92 141 aa13.63□□□□□ -0.23
SEC23A-213ENST00000557280 hDV102S1A0JD36 115 aa13.62□□□□□ -0.23
SEC23A-213ENST00000557280 UBE2D1P51668 147 aa13.62□□□□□ -0.23
SEC23A-213ENST00000557280 RAB5BP61020 215 aa13.62□□□□□ -0.23
SEC23A-213ENST00000557280 C5orf38Q86SI9 138 aa13.62□□□□□ -0.23
SEC23A-213ENST00000557280 KIAA1109Q2LD37 5005 aa13.61□□□□□ -0.23
SEC23A-213ENST00000557280 GCSHP23434 173 aa13.61□□□□□ -0.23
SEC23A-213ENST00000557280 LINC00310P59036 64 aa13.61□□□□□ -0.23
SEC23A-213ENST00000557280 LINC00242Q5T6M2 205 aa13.61□□□□□ -0.23
SEC23A-213ENST00000557280 VCX2Q9H322 139 aa13.61□□□□□ -0.23
SEC23A-213ENST00000557280 HBDP02042 147 aa13.6□□□□□ -0.23
SEC23A-213ENST00000557280 SLPIP03973 132 aa13.6□□□□□ -0.23
SEC23A-213ENST00000557280 COX6A2Q02221 97 aa13.6□□□□□ -0.23
SEC23A-213ENST00000557280 BAGE3Q86Y29 109 aa13.6□□□□□ -0.23
SEC23A-213ENST00000557280 C2orf88Q9BSF0 95 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms