RNA–Protein interactions for RNA: ENST00000557060.1

SYNE2-225, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 3,203 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-225ENST00000557060 CMC4P56277 68 aaPredicted RBP4.22□□□□□ -1.73
SYNE2-225ENST00000557060 FAM222AQ5U5X8 452 aa4.22□□□□□ -1.73
SYNE2-225ENST00000557060 CLPSL2Q6UWE3 100 aa4.22□□□□□ -1.73
SYNE2-225ENST00000557060 ZNF625Q96I27 306 aaPredicted RBP4.22□□□□□ -1.73
SYNE2-225ENST00000557060 TIMM17AQ99595 171 aa4.22□□□□□ -1.73
SYNE2-225ENST00000557060 CITED1Q99966 193 aa4.22□□□□□ -1.73
SYNE2-225ENST00000557060 FAM110AQ9BQ89 295 aa4.22□□□□□ -1.73
SYNE2-225ENST00000557060 CHCHD7Q9BUK0 85 aa4.22□□□□□ -1.73
SYNE2-225ENST00000557060 UBE2L6O14933 153 aa4.22□□□□□ -1.73
SYNE2-225ENST00000557060 DLEU1O43261 78 aa4.22□□□□□ -1.73
SYNE2-225ENST00000557060 HERVK_113P61574 105 aa4.22□□□□□ -1.73
SYNE2-225ENST00000557060 HSD52Q0P140 79 aa4.22□□□□□ -1.73
SYNE2-225ENST00000557060 GAGE6Q13070 117 aa4.22□□□□□ -1.73
SYNE2-225ENST00000557060 CHCHD5Q9BSY4 110 aa4.22□□□□□ -1.73
SYNE2-225ENST00000557060 GEMIN7Q9H840 131 aaKnown RBP4.22□□□□□ -1.73
SYNE2-225ENST00000557060 TMEM262E9PQX1 116 aa4.21□□□□□ -1.73
SYNE2-225ENST00000557060 FOSL1P15407 271 aa4.21□□□□□ -1.73
SYNE2-225ENST00000557060 LGALS3P17931 250 aaKnown RBP4.21□□□□□ -1.73
SYNE2-225ENST00000557060 NTM-AS1Q6ZSK4 140 aa4.21□□□□□ -1.73
SYNE2-225ENST00000557060 RETNQ9HD89 108 aa4.21□□□□□ -1.73
SYNE2-225ENST00000557060 TRAV4A0A0B4J268 109 aa4.21□□□□□ -1.74
SYNE2-225ENST00000557060 E9PLD3 99 aa4.21□□□□□ -1.74
SYNE2-225ENST00000557060 APOMO95445 188 aa4.21□□□□□ -1.74
SYNE2-225ENST00000557060 PRSS2P07478 247 aa4.21□□□□□ -1.74
SYNE2-225ENST00000557060 IGHV4-30-4P0DP06 118 aa4.21□□□□□ -1.74
SYNE2-225ENST00000557060 UBE2D4Q9Y2X8 147 aa4.21□□□□□ -1.74
SYNE2-225ENST00000557060 A6NDN8 102 aa4.21□□□□□ -1.74
SYNE2-225ENST00000557060 H7C2G1 150 aa4.21□□□□□ -1.74
SYNE2-225ENST00000557060 CCL25O15444 150 aa4.21□□□□□ -1.74
SYNE2-225ENST00000557060 RPL32P62910 135 aaKnown RBP4.21□□□□□ -1.74
SYNE2-225ENST00000557060 J3QQQ9 107 aa4.2□□□□□ -1.74
SYNE2-225ENST00000557060 GYPEP15421 78 aa4.2□□□□□ -1.74
SYNE2-225ENST00000557060 ZNF22P17026 224 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-225ENST00000557060 DAZ2Q13117 558 aaKnown RBP4.2□□□□□ -1.74
SYNE2-225ENST00000557060 LURAP1LQ8IV03 231 aa4.2□□□□□ -1.74
SYNE2-225ENST00000557060 MTURNQ8N3F0 131 aa4.2□□□□□ -1.74
SYNE2-225ENST00000557060 DAND5Q8N907 189 aa4.2□□□□□ -1.74
SYNE2-225ENST00000557060 CDKN2A-AS1Q9UH64 79 aa4.2□□□□□ -1.74
SYNE2-225ENST00000557060 MRPL52Q86TS9 123 aaKnown RBP4.2□□□□□ -1.74
SYNE2-225ENST00000557060 FAM104AQ969W3 186 aa4.2□□□□□ -1.74
SYNE2-225ENST00000557060 TIMM21Q9BVV7 248 aa4.2□□□□□ -1.74
SYNE2-225ENST00000557060 IGHV4-28A0A0C4DH34 117 aa4.19□□□□□ -1.74
SYNE2-225ENST00000557060 INSL3P51460 131 aa4.19□□□□□ -1.74
SYNE2-225ENST00000557060 COX6A2Q02221 97 aa4.19□□□□□ -1.74
SYNE2-225ENST00000557060 CEND1Q8N111 149 aa4.19□□□□□ -1.74
SYNE2-225ENST00000557060 IL17DQ8TAD2 202 aa4.19□□□□□ -1.74
SYNE2-225ENST00000557060 CELA1Q9UNI1 258 aa4.19□□□□□ -1.74
SYNE2-225ENST00000557060 X6R8D5 127 aa4.19□□□□□ -1.74
SYNE2-225ENST00000557060 F5H768 121 aa4.19□□□□□ -1.74
SYNE2-225ENST00000557060 IGHV3-30-3P0DP02 117 aa4.19□□□□□ -1.74
SYNE2-225ENST00000557060 SEC11AP67812 179 aa4.19□□□□□ -1.74
SYNE2-225ENST00000557060 FHL2Q14192 279 aa4.19□□□□□ -1.74
SYNE2-225ENST00000557060 PAPPA-AS1Q5QFB9 102 aa4.19□□□□□ -1.74
SYNE2-225ENST00000557060 OR5A1Q8NGJ0 315 aa4.19□□□□□ -1.74
SYNE2-225ENST00000557060 C11orf68Q9H3H3 251 aaKnown RBP4.19□□□□□ -1.74
SYNE2-225ENST00000557060 SMIM13P0DJ93 91 aa4.19□□□□□ -1.74
SYNE2-225ENST00000557060 UBE2D3P61077 147 aa4.19□□□□□ -1.74
SYNE2-225ENST00000557060 UBE2D2P62837 147 aa4.19□□□□□ -1.74
SYNE2-225ENST00000557060 MRAPQ8TCY5 172 aa4.19□□□□□ -1.74
SYNE2-225ENST00000557060 TOMM7Q9P0U1 55 aa4.19□□□□□ -1.74
SYNE2-225ENST00000557060 DAD1P61803 113 aa4.18□□□□□ -1.74
SYNE2-225ENST00000557060 PRIMA1Q86XR5 153 aa4.18□□□□□ -1.74
SYNE2-225ENST00000557060 Q8N3U1 123 aa4.18□□□□□ -1.74
SYNE2-225ENST00000557060 DNAJC30Q96LL9 226 aa4.18□□□□□ -1.74
SYNE2-225ENST00000557060 TMEM243Q9BU79 118 aa4.18□□□□□ -1.74
SYNE2-225ENST00000557060 STAB2Q8WWQ8 2551 aa4.18□□□□□ -1.74
SYNE2-225ENST00000557060 IGLV4-60A0A075B6I1 120 aa4.18□□□□□ -1.74
SYNE2-225ENST00000557060 TRAV26-1A0A087WT03 109 aa4.18□□□□□ -1.74
SYNE2-225ENST00000557060 TMEM223A0PJW6 202 aa4.18□□□□□ -1.74
SYNE2-225ENST00000557060 GAGE10A6NGK3 116 aa4.18□□□□□ -1.74
SYNE2-225ENST00000557060 G3V4G9 280 aa4.18□□□□□ -1.74
SYNE2-225ENST00000557060 SIVA1O15304 175 aa4.18□□□□□ -1.74
SYNE2-225ENST00000557060 PAX4O43316 350 aa4.18□□□□□ -1.74
SYNE2-225ENST00000557060 APOC4P55056 127 aa4.18□□□□□ -1.74
SYNE2-225ENST00000557060 DAZ4Q86SG3 579 aaKnown RBP4.18□□□□□ -1.74
SYNE2-225ENST00000557060 DAZ3Q9NR90 486 aaKnown RBP4.18□□□□□ -1.74
SYNE2-225ENST00000557060 KRTAP10-11P60412 298 aa4.17□□□□□ -1.74
SYNE2-225ENST00000557060 UBE2V1Q13404 147 aa4.17□□□□□ -1.74
SYNE2-225ENST00000557060 PIK3CD-AS1Q5SR53 167 aa4.17□□□□□ -1.74
SYNE2-225ENST00000557060 SPANXA1Q9NS26 97 aa4.17□□□□□ -1.74
SYNE2-225ENST00000557060 IGLV10-54A0A075B6I4 117 aa4.17□□□□□ -1.74
SYNE2-225ENST00000557060 LOC107984156A0A0G2JMH3 177 aa4.17□□□□□ -1.74
SYNE2-225ENST00000557060 TRBV10-1A0A0K0K1A3 114 aa4.17□□□□□ -1.74
SYNE2-225ENST00000557060 ARL17AQ8IVW1 177 aa4.17□□□□□ -1.74
SYNE2-225ENST00000557060 TMEM101Q96IK0 257 aa4.17□□□□□ -1.74
SYNE2-225ENST00000557060 TRBV6-4A0A1B0GX49 114 aa4.17□□□□□ -1.74
SYNE2-225ENST00000557060 LINC01549A6NIU2 74 aa4.17□□□□□ -1.74
SYNE2-225ENST00000557060 C12orf74Q32Q52 190 aa4.17□□□□□ -1.74
SYNE2-225ENST00000557060 ATP6V0E2Q8NHE4 81 aa4.17□□□□□ -1.74
SYNE2-225ENST00000557060 AMELXQ99217 191 aa4.17□□□□□ -1.74
SYNE2-225ENST00000557060 OVOL2Q9BRP0 275 aa4.17□□□□□ -1.74
SYNE2-225ENST00000557060 NDUFA12Q9UI09 145 aa4.17□□□□□ -1.74
SYNE2-225ENST00000557060 PYGO1Q9Y3Y4 419 aa4.17□□□□□ -1.74
SYNE2-225ENST00000557060 C9orf118A6NHY6 69 aa4.16□□□□□ -1.74
SYNE2-225ENST00000557060 MRPS36P82909 103 aaKnown RBP4.16□□□□□ -1.74
SYNE2-225ENST00000557060 LINC00242Q5T6M2 205 aa4.16□□□□□ -1.74
SYNE2-225ENST00000557060 C5orf38Q86SI9 138 aa4.16□□□□□ -1.74
SYNE2-225ENST00000557060 NFE4Q86UQ8 179 aa4.16□□□□□ -1.74
SYNE2-225ENST00000557060 C10orf126Q8N4M7 172 aa4.16□□□□□ -1.74
SYNE2-225ENST00000557060 VSIG2Q96IQ7 327 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms