RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 RHOHQ15669 191 aa8.65□□□□□ -1.02
PSEN1-219ENST00000556951 TTC32Q5I0X7 151 aa8.65□□□□□ -1.02
PSEN1-219ENST00000556951 NEGR1Q7Z3B1 354 aa8.65□□□□□ -1.02
PSEN1-219ENST00000556951 RPL36ALQ969Q0 106 aaKnown RBP8.65□□□□□ -1.02
PSEN1-219ENST00000556951 UPK3BQ9BT76 320 aa8.65□□□□□ -1.02
PSEN1-219ENST00000556951 HHLA3Q9XRX5 114 aa8.65□□□□□ -1.02
PSEN1-219ENST00000556951 Q9UF83 564 aa8.64□□□□□ -1.03
PSEN1-219ENST00000556951 A0A096LNJ9 63 aa8.63□□□□□ -1.03
PSEN1-219ENST00000556951 LINC01549A6NIU2 74 aa8.63□□□□□ -1.03
PSEN1-219ENST00000556951 TSHBP01222 138 aa8.63□□□□□ -1.03
PSEN1-219ENST00000556951 DAZ4Q86SG3 579 aaKnown RBP8.63□□□□□ -1.03
PSEN1-219ENST00000556951 DAZ3Q9NR90 486 aaKnown RBP8.63□□□□□ -1.03
PSEN1-219ENST00000556951 PRO0255Q9UI72 69 aa8.63□□□□□ -1.03
PSEN1-219ENST00000556951 FAT3Q8TDW7 4589 aa8.63□□□□□ -1.03
PSEN1-219ENST00000556951 MUC2Q02817 5179 aa8.62□□□□□ -1.03
PSEN1-219ENST00000556951 GAGE12JA6NER3 117 aa8.62□□□□□ -1.03
PSEN1-219ENST00000556951 CRYBA4P53673 196 aa8.62□□□□□ -1.03
PSEN1-219ENST00000556951 KRTDAPP60985 99 aa8.62□□□□□ -1.03
PSEN1-219ENST00000556951 UBE2D3P61077 147 aa8.62□□□□□ -1.03
PSEN1-219ENST00000556951 UBE2D2P62837 147 aa8.62□□□□□ -1.03
PSEN1-219ENST00000556951 GAGE1Q13065 139 aa8.62□□□□□ -1.03
PSEN1-219ENST00000556951 GAGE4Q13068 117 aa8.62□□□□□ -1.03
PSEN1-219ENST00000556951 GAGE5Q13069 117 aa8.62□□□□□ -1.03
PSEN1-219ENST00000556951 GAGE13Q4V321 117 aa8.62□□□□□ -1.03
PSEN1-219ENST00000556951 C3orf79P0CE67 100 aa8.61□□□□□ -1.03
PSEN1-219ENST00000556951 JOSD1Q15040 202 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-219ENST00000556951 TOMM6Q96B49 74 aa8.61□□□□□ -1.03
PSEN1-219ENST00000556951 MAP1LC3CQ9BXW4 147 aa8.61□□□□□ -1.03
PSEN1-219ENST00000556951 MRPS16Q9Y3D3 137 aaKnown RBP8.61□□□□□ -1.03
PSEN1-219ENST00000556951 PAX4O43316 350 aa8.6□□□□□ -1.03
PSEN1-219ENST00000556951 ATP5LO75964 103 aa8.6□□□□□ -1.03
PSEN1-219ENST00000556951 SMIM6P0DI80 62 aa8.6□□□□□ -1.03
PSEN1-219ENST00000556951 COTL1Q14019 142 aa8.6□□□□□ -1.03
PSEN1-219ENST00000556951 CDPF1Q6NVV7 123 aa8.6□□□□□ -1.03
PSEN1-219ENST00000556951 C2orf66Q6UXQ4 117 aa8.6□□□□□ -1.03
PSEN1-219ENST00000556951 LINC00173Q6ZV60 143 aa8.6□□□□□ -1.03
PSEN1-219ENST00000556951 CYSLTR1Q9Y271 337 aa8.6□□□□□ -1.03
PSEN1-219ENST00000556951 TRAV26-1A0A087WT03 109 aa8.59□□□□□ -1.03
PSEN1-219ENST00000556951 LOC100131303A0A0U1RQF7 123 aa8.59□□□□□ -1.03
PSEN1-219ENST00000556951 SCGB1D1O95968 90 aa8.59□□□□□ -1.03
PSEN1-219ENST00000556951 LINC00694P0DN24 101 aa8.59□□□□□ -1.03
PSEN1-219ENST00000556951 GYPEP15421 78 aa8.59□□□□□ -1.03
PSEN1-219ENST00000556951 PET117Q6UWS5 81 aa8.59□□□□□ -1.03
PSEN1-219ENST00000556951 DEFB104AQ8WTQ1 72 aa8.59□□□□□ -1.03
PSEN1-219ENST00000556951 IFI27L1Q96BM0 104 aa8.59□□□□□ -1.03
PSEN1-219ENST00000556951 SCGB3A1Q96QR1 104 aa8.59□□□□□ -1.03
PSEN1-219ENST00000556951 IGHV3-38A0A0C4DH36 116 aa8.58□□□□□ -1.04
PSEN1-219ENST00000556951 A0A0J9YY99 117 aa8.58□□□□□ -1.04
PSEN1-219ENST00000556951 SYS1-DBNDD2H3BUS1 97 aa8.58□□□□□ -1.04
PSEN1-219ENST00000556951 TMEM97Q5BJF2 176 aa8.58□□□□□ -1.04
PSEN1-219ENST00000556951 PYY3Q5JQD4 70 aa8.58□□□□□ -1.04
PSEN1-219ENST00000556951 C20orf203Q8NBC4 194 aa8.58□□□□□ -1.04
PSEN1-219ENST00000556951 GTSF1LQ9H1H1 148 aa8.58□□□□□ -1.04
PSEN1-219ENST00000556951 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.57□□□□□ -1.04
PSEN1-219ENST00000556951 DNAH10OSP0CZ25 163 aa8.57□□□□□ -1.04
PSEN1-219ENST00000556951 HAMPP81172 84 aa8.57□□□□□ -1.04
PSEN1-219ENST00000556951 ERASQ7Z444 233 aa8.57□□□□□ -1.04
PSEN1-219ENST00000556951 LINC00518Q8N0U6 118 aa8.57□□□□□ -1.04
PSEN1-219ENST00000556951 TMEM141Q96I45 108 aa8.57□□□□□ -1.04
PSEN1-219ENST00000556951 VSIG2Q96IQ7 327 aa8.57□□□□□ -1.04
PSEN1-219ENST00000556951 CHCHD7Q9BUK0 85 aa8.57□□□□□ -1.04
PSEN1-219ENST00000556951 A0A087WTM6 91 aa8.56□□□□□ -1.04
PSEN1-219ENST00000556951 C20orf202A1L168 122 aa8.56□□□□□ -1.04
PSEN1-219ENST00000556951 H3BNG1 76 aa8.56□□□□□ -1.04
PSEN1-219ENST00000556951 SH2D6Q7Z4S9 175 aa8.56□□□□□ -1.04
PSEN1-219ENST00000556951 ATP6V0E2Q8NHE4 81 aa8.56□□□□□ -1.04
PSEN1-219ENST00000556951 IGIPA6NJ69 53 aa8.55□□□□□ -1.04
PSEN1-219ENST00000556951 PRSS1P07477 247 aa8.55□□□□□ -1.04
PSEN1-219ENST00000556951 RPL39P62891 51 aaKnown RBP8.55□□□□□ -1.04
PSEN1-219ENST00000556951 Q6ZN92 141 aa8.55□□□□□ -1.04
PSEN1-219ENST00000556951 Q8N976 141 aa8.55□□□□□ -1.04
PSEN1-219ENST00000556951 TIMM17AQ99595 171 aa8.55□□□□□ -1.04
PSEN1-219ENST00000556951 PYGO1Q9Y3Y4 419 aa8.55□□□□□ -1.04
PSEN1-219ENST00000556951 A0A096LPF7 62 aa8.54□□□□□ -1.04
PSEN1-219ENST00000556951 EREGO14944 169 aa8.54□□□□□ -1.04
PSEN1-219ENST00000556951 NPSP0C0P6 89 aa8.54□□□□□ -1.04
PSEN1-219ENST00000556951 SMAGPQ0VAQ4 97 aa8.54□□□□□ -1.04
PSEN1-219ENST00000556951 MRPL23Q16540 153 aaKnown RBP8.54□□□□□ -1.04
PSEN1-219ENST00000556951 NTM-AS1Q6ZSK4 140 aa8.54□□□□□ -1.04
PSEN1-219ENST00000556951 C12orf57Q99622 126 aa8.54□□□□□ -1.04
PSEN1-219ENST00000556951 H0Y8G0 127 aa8.53□□□□□ -1.04
PSEN1-219ENST00000556951 H7C423 109 aa8.53□□□□□ -1.04
PSEN1-219ENST00000556951 SIVA1O15304 175 aa8.53□□□□□ -1.04
PSEN1-219ENST00000556951 GCSHP23434 173 aa8.53□□□□□ -1.04
PSEN1-219ENST00000556951 LINC01545Q5VT33 79 aa8.53□□□□□ -1.04
PSEN1-219ENST00000556951 TMEM243Q9BU79 118 aa8.53□□□□□ -1.04
PSEN1-219ENST00000556951 TIMM21Q9BVV7 248 aa8.53□□□□□ -1.04
PSEN1-219ENST00000556951 SPANXA1Q9NS26 97 aa8.53□□□□□ -1.04
PSEN1-219ENST00000556951 ICOSQ9Y6W8 199 aa8.53□□□□□ -1.04
PSEN1-219ENST00000556951 TRBV25-1A0A075B6N4 114 aa8.52□□□□□ -1.05
PSEN1-219ENST00000556951 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.52□□□□□ -1.05
PSEN1-219ENST00000556951 TRBV6-8A0A0A6YYG3 113 aa8.52□□□□□ -1.05
PSEN1-219ENST00000556951 TRAV12-1A0A0B4J245 112 aa8.52□□□□□ -1.05
PSEN1-219ENST00000556951 IGKV2-29A2NJV5 120 aaPredicted RBP8.52□□□□□ -1.05
PSEN1-219ENST00000556951 PAPPA-AS1Q5QFB9 102 aa8.52□□□□□ -1.05
PSEN1-219ENST00000556951 A0A087WX48 190 aa8.51□□□□□ -1.05
PSEN1-219ENST00000556951 BAALCQ8WXS3 180 aa8.51□□□□□ -1.05
PSEN1-219ENST00000556951 FAM30AQ9NZY2 134 aa8.51□□□□□ -1.05
PSEN1-219ENST00000556951 UBE2D4Q9Y2X8 147 aa8.51□□□□□ -1.05
PSEN1-219ENST00000556951 UBE2L6O14933 153 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms