RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 TRAV25A0A0B4J276 109 aa11.08□□□□□ -0.64
ARHGEF40-207ENST00000556399 PIK3CD-AS1Q5SR53 167 aa11.08□□□□□ -0.64
ARHGEF40-207ENST00000556399 IGLV10-54A0A075B6I4 117 aa11.08□□□□□ -0.64
ARHGEF40-207ENST00000556399 H7C423 109 aa11.08□□□□□ -0.64
ARHGEF40-207ENST00000556399 CEP295Q9C0D2 2601 aa11.08□□□□□ -0.64
ARHGEF40-207ENST00000556399 MRPS36P82909 103 aaKnown RBP11.08□□□□□ -0.64
ARHGEF40-207ENST00000556399 UBE2D4Q9Y2X8 147 aa11.08□□□□□ -0.64
ARHGEF40-207ENST00000556399 LAMA2P24043 3122 aaKnown RBP11.07□□□□□ -0.64
ARHGEF40-207ENST00000556399 TIMM17BO60830 172 aa11.07□□□□□ -0.64
ARHGEF40-207ENST00000556399 PRM2P04554 102 aa11.07□□□□□ -0.64
ARHGEF40-207ENST00000556399 ATP5G1P05496 136 aa11.07□□□□□ -0.64
ARHGEF40-207ENST00000556399 RANBP2P49792 3224 aaKnown RBP11.07□□□□□ -0.64
ARHGEF40-207ENST00000556399 CCDC179H3BU77 68 aa11.06□□□□□ -0.64
ARHGEF40-207ENST00000556399 J3KT08 172 aa11.06□□□□□ -0.64
ARHGEF40-207ENST00000556399 NDUFC2O95298 119 aa11.05□□□□□ -0.64
ARHGEF40-207ENST00000556399 POM121L12Q8N7R1 296 aa11.05□□□□□ -0.64
ARHGEF40-207ENST00000556399 DEFB113Q30KQ7 82 aa11.04□□□□□ -0.64
ARHGEF40-207ENST00000556399 JMJD7-PLA2G4BH0Y9G9 81 aa11.04□□□□□ -0.64
ARHGEF40-207ENST00000556399 DEFB114Q30KQ6 69 aa11.04□□□□□ -0.64
ARHGEF40-207ENST00000556399 MYO9AB2RTY4 2548 aa11.04□□□□□ -0.64
ARHGEF40-207ENST00000556399 ZNF580Q9UK33 172 aa11.04□□□□□ -0.64
ARHGEF40-207ENST00000556399 RMI2Q96E14 147 aa11.03□□□□□ -0.64
ARHGEF40-207ENST00000556399 F8WEM9 126 aa11.03□□□□□ -0.64
ARHGEF40-207ENST00000556399 SDIM1Q6ZPB5 146 aa11.03□□□□□ -0.64
ARHGEF40-207ENST00000556399 UQCRQO14949 82 aa11.02□□□□□ -0.64
ARHGEF40-207ENST00000556399 CDK2AP2O75956 126 aa11.02□□□□□ -0.65
ARHGEF40-207ENST00000556399 CDIP1Q9H305 208 aa11.02□□□□□ -0.65
ARHGEF40-207ENST00000556399 Q6YL49 198 aa11.02□□□□□ -0.65
ARHGEF40-207ENST00000556399 Q6ZSV7 163 aa11.02□□□□□ -0.65
ARHGEF40-207ENST00000556399 A0A1W2PPR1 153 aa11.01□□□□□ -0.65
ARHGEF40-207ENST00000556399 NCR3O14931 201 aa11.01□□□□□ -0.65
ARHGEF40-207ENST00000556399 LAMA3Q16787 3333 aa11.01□□□□□ -0.65
ARHGEF40-207ENST00000556399 RBM3P98179 157 aaKnown RBP11.01□□□□□ -0.65
ARHGEF40-207ENST00000556399 ESM1Q9NQ30 184 aa11□□□□□ -0.65
ARHGEF40-207ENST00000556399 NCOR2Q9Y618 2525 aa11□□□□□ -0.65
ARHGEF40-207ENST00000556399 ADAMTSL4-AS1Q5T5F5 129 aa10.99□□□□□ -0.65
ARHGEF40-207ENST00000556399 Q6Q795 121 aa10.99□□□□□ -0.65
ARHGEF40-207ENST00000556399 C3orf22Q8N5N4 141 aa10.99□□□□□ -0.65
ARHGEF40-207ENST00000556399 PRO0461Q9UI25 63 aa10.99□□□□□ -0.65
ARHGEF40-207ENST00000556399 KIF25-AS1Q9Y6Z4 181 aa10.99□□□□□ -0.65
ARHGEF40-207ENST00000556399 TMEM256-PLSCR3K7ERE1 68 aa10.99□□□□□ -0.65
ARHGEF40-207ENST00000556399 SMCPP49901 116 aaPredicted RBP10.98□□□□□ -0.65
ARHGEF40-207ENST00000556399 NAV2Q8IVL1 2488 aa10.98□□□□□ -0.65
ARHGEF40-207ENST00000556399 SLPIP03973 132 aa10.98□□□□□ -0.65
ARHGEF40-207ENST00000556399 SONP18583 2426 aaKnown RBP10.98□□□□□ -0.65
ARHGEF40-207ENST00000556399 IMUPQ9GZP8 106 aa10.98□□□□□ -0.65
ARHGEF40-207ENST00000556399 NKAPP1Q8N9T2 125 aa10.98□□□□□ -0.65
ARHGEF40-207ENST00000556399 TRANK1O15050 2925 aa10.97□□□□□ -0.65
ARHGEF40-207ENST00000556399 UNC80Q8N2C7 3258 aa10.97□□□□□ -0.65
ARHGEF40-207ENST00000556399 HIVEP2P31629 2446 aa10.97□□□□□ -0.65
ARHGEF40-207ENST00000556399 C18orf65Q6ZTR6 163 aa10.97□□□□□ -0.65
ARHGEF40-207ENST00000556399 hADV29S1A0JD25 119 aa10.96□□□□□ -0.65
ARHGEF40-207ENST00000556399 IBA57-AS1B1ANH7 110 aa10.96□□□□□ -0.65
ARHGEF40-207ENST00000556399 AVPP01185 164 aa10.96□□□□□ -0.65
ARHGEF40-207ENST00000556399 CXCL5P42830 114 aa10.96□□□□□ -0.65
ARHGEF40-207ENST00000556399 AMELXQ99217 191 aa10.96□□□□□ -0.65
ARHGEF40-207ENST00000556399 ZNF702PQ9H963 129 aa10.96□□□□□ -0.65
ARHGEF40-207ENST00000556399 ANKRD11Q6UB99 2663 aaPredicted RBP10.96□□□□□ -0.65
ARHGEF40-207ENST00000556399 PRB1P04280 392 aa10.96□□□□□ -0.65
ARHGEF40-207ENST00000556399 FAM240AA0A1B0GVK7 77 aa10.96□□□□□ -0.66
ARHGEF40-207ENST00000556399 CHCHD7Q9BUK0 85 aa10.95□□□□□ -0.66
ARHGEF40-207ENST00000556399 PIEZO1Q92508 2521 aa10.95□□□□□ -0.66
ARHGEF40-207ENST00000556399 LINC00242Q5T6M2 205 aa10.95□□□□□ -0.66
ARHGEF40-207ENST00000556399 FAM222AQ5U5X8 452 aa10.95□□□□□ -0.66
ARHGEF40-207ENST00000556399 BRI3O95415 125 aa10.94□□□□□ -0.66
ARHGEF40-207ENST00000556399 IGHV4-31P0DP07 118 aa10.94□□□□□ -0.66
ARHGEF40-207ENST00000556399 TRAV23DV6A0A075B6W5 121 aa10.94□□□□□ -0.66
ARHGEF40-207ENST00000556399 LINC00315P59091 139 aa10.94□□□□□ -0.66
ARHGEF40-207ENST00000556399 NDUFA7O95182 113 aa10.93□□□□□ -0.66
ARHGEF40-207ENST00000556399 SPAG11BQ08648 103 aa10.93□□□□□ -0.66
ARHGEF40-207ENST00000556399 MYO18BQ8IUG5 2567 aa10.93□□□□□ -0.66
ARHGEF40-207ENST00000556399 PRO0255Q9UI72 69 aa10.93□□□□□ -0.66
ARHGEF40-207ENST00000556399 TRBV6-8A0A0A6YYG3 113 aa10.93□□□□□ -0.66
ARHGEF40-207ENST00000556399 DNAJC9-AS1A6NH13 148 aa10.92□□□□□ -0.66
ARHGEF40-207ENST00000556399 PRORYQ9H606 182 aa10.92□□□□□ -0.66
ARHGEF40-207ENST00000556399 DEFB4AO15263 64 aa10.92□□□□□ -0.66
ARHGEF40-207ENST00000556399 C9orf66Q5T8R8 295 aa10.92□□□□□ -0.66
ARHGEF40-207ENST00000556399 TRBV6-4A0A1B0GX49 114 aa10.91□□□□□ -0.66
ARHGEF40-207ENST00000556399 COX6A2Q02221 97 aa10.91□□□□□ -0.66
ARHGEF40-207ENST00000556399 C5orf47Q569G3 176 aa10.91□□□□□ -0.66
ARHGEF40-207ENST00000556399 CAMK2N2Q96S95 79 aa10.91□□□□□ -0.66
ARHGEF40-207ENST00000556399 M0QXV9 152 aa10.91□□□□□ -0.66
ARHGEF40-207ENST00000556399 SMIM11BQ8TCY0 68 aa10.91□□□□□ -0.66
ARHGEF40-207ENST00000556399 CDC42SE2Q9NRR3 84 aa10.91□□□□□ -0.66
ARHGEF40-207ENST00000556399 SMIM1B2RUZ4 78 aa10.9□□□□□ -0.66
ARHGEF40-207ENST00000556399 LINC00269Q8N2A0 174 aa10.9□□□□□ -0.66
ARHGEF40-207ENST00000556399 CCDC168Q8NDH2 2452 aa10.9□□□□□ -0.66
ARHGEF40-207ENST00000556399 LOC100131303A0A0U1RQF7 123 aa10.9□□□□□ -0.66
ARHGEF40-207ENST00000556399 DEFB105AQ8NG35 78 aa10.9□□□□□ -0.66
ARHGEF40-207ENST00000556399 PKIGQ9Y2B9 76 aa10.9□□□□□ -0.66
ARHGEF40-207ENST00000556399 PRRC2AP48634 2157 aaKnown RBP10.9□□□□□ -0.66
ARHGEF40-207ENST00000556399 FAM19A4Q96LR4 140 aa10.89□□□□□ -0.67
ARHGEF40-207ENST00000556399 UPK3BQ9BT76 320 aa10.89□□□□□ -0.67
ARHGEF40-207ENST00000556399 DEFB135Q30KP9 77 aa10.89□□□□□ -0.67
ARHGEF40-207ENST00000556399 Q6ZSN1 163 aa10.89□□□□□ -0.67
ARHGEF40-207ENST00000556399 KLK12Q9UKR0 248 aa10.88□□□□□ -0.67
ARHGEF40-207ENST00000556399 RPL18AQ02543 176 aaKnown RBP10.88□□□□□ -0.67
ARHGEF40-207ENST00000556399 DIRC1Q969H9 104 aa10.88□□□□□ -0.67
ARHGEF40-207ENST00000556399 HIVEP3Q5T1R4 2406 aa10.88□□□□□ -0.67
ARHGEF40-207ENST00000556399 SPART-AS1P0CW21 52 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms