RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 WFDC2Q14508 124 aa6.39□□□□□ -1.39
SRP54-210ENST00000556380 KRTAP26-1Q6PEX3 210 aa6.39□□□□□ -1.39
SRP54-210ENST00000556380 SVBPQ8N300 66 aa6.39□□□□□ -1.39
SRP54-210ENST00000556380 C20orf78Q9BR46 151 aa6.39□□□□□ -1.39
SRP54-210ENST00000556380 COX11Q9Y6N1 276 aa6.39□□□□□ -1.39
SRP54-210ENST00000556380 C7orf77A4D0Y5 90 aa6.38□□□□□ -1.39
SRP54-210ENST00000556380 SNAPINO95295 136 aa6.38□□□□□ -1.39
SRP54-210ENST00000556380 TNFRSF6BO95407 300 aa6.38□□□□□ -1.39
SRP54-210ENST00000556380 ANGP03950 147 aaKnown RBP6.38□□□□□ -1.39
SRP54-210ENST00000556380 CKS2P33552 79 aa6.38□□□□□ -1.39
SRP54-210ENST00000556380 Q0VG73 95 aa6.38□□□□□ -1.39
SRP54-210ENST00000556380 COX19Q49B96 90 aa6.38□□□□□ -1.39
SRP54-210ENST00000556380 LINC00269Q8N2A0 174 aa6.38□□□□□ -1.39
SRP54-210ENST00000556380 CLRN3Q8NCR9 226 aa6.38□□□□□ -1.39
SRP54-210ENST00000556380 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.37□□□□□ -1.39
SRP54-210ENST00000556380 IGKV2-29A2NJV5 120 aaPredicted RBP6.37□□□□□ -1.39
SRP54-210ENST00000556380 D6R8Y8 96 aa6.37□□□□□ -1.39
SRP54-210ENST00000556380 PSCAO43653 123 aa6.37□□□□□ -1.39
SRP54-210ENST00000556380 NPYP01303 97 aa6.37□□□□□ -1.39
SRP54-210ENST00000556380 APCSP02743 223 aa6.37□□□□□ -1.39
SRP54-210ENST00000556380 MIAQ16674 131 aa6.37□□□□□ -1.39
SRP54-210ENST00000556380 TMEM136Q6ZRR5 245 aa6.37□□□□□ -1.39
SRP54-210ENST00000556380 RMI2Q96E14 147 aa6.37□□□□□ -1.39
SRP54-210ENST00000556380 LAMTOR2Q9Y2Q5 125 aa6.37□□□□□ -1.39
SRP54-210ENST00000556380 IGKV2D-24A0A075B6R9 120 aa6.36□□□□□ -1.39
SRP54-210ENST00000556380 PRSS47A8MTI9 375 aa6.36□□□□□ -1.39
SRP54-210ENST00000556380 C16orf90A8MZG2 172 aa6.36□□□□□ -1.39
SRP54-210ENST00000556380 UBE2L6O14933 153 aa6.36□□□□□ -1.39
SRP54-210ENST00000556380 FGF6P10767 208 aa6.36□□□□□ -1.39
SRP54-210ENST00000556380 FUSP35637 526 aaKnown RBP eCLIP6.36□□□□□ -1.39
SRP54-210ENST00000556380 SMAGPQ0VAQ4 97 aa6.36□□□□□ -1.39
SRP54-210ENST00000556380 MRPL52Q86TS9 123 aaKnown RBP6.36□□□□□ -1.39
SRP54-210ENST00000556380 ORMDL3Q8N138 153 aa6.36□□□□□ -1.39
SRP54-210ENST00000556380 Q8N814 137 aa6.36□□□□□ -1.39
SRP54-210ENST00000556380 BAALCQ8WXS3 180 aa6.36□□□□□ -1.39
SRP54-210ENST00000556380 KIR2DL4Q99706 377 aa6.36□□□□□ -1.39
SRP54-210ENST00000556380 APOC3P02656 99 aa6.35□□□□□ -1.39
SRP54-210ENST00000556380 CRPP02741 224 aa6.35□□□□□ -1.39
SRP54-210ENST00000556380 ZNF25P17030 456 aaPredicted RBP6.35□□□□□ -1.39
SRP54-210ENST00000556380 REG3AQ06141 175 aa6.35□□□□□ -1.39
SRP54-210ENST00000556380 CLPSL2Q6UWE3 100 aa6.35□□□□□ -1.39
SRP54-210ENST00000556380 PRELID3AQ96N28 172 aa6.35□□□□□ -1.39
SRP54-210ENST00000556380 C1orf43Q9BWL3 253 aa6.35□□□□□ -1.39
SRP54-210ENST00000556380 RPS10P5Q9NQ39 176 aa6.35□□□□□ -1.39
SRP54-210ENST00000556380 TRAV8-4A0A0B4J246 113 aa6.34□□□□□ -1.39
SRP54-210ENST00000556380 HLA-DQA1P01909 254 aa6.34□□□□□ -1.39
SRP54-210ENST00000556380 MT-ND6P03923 174 aa6.34□□□□□ -1.39
SRP54-210ENST00000556380 SMIM2Q9BVW6 85 aa6.34□□□□□ -1.39
SRP54-210ENST00000556380 GNB1LQ9BYB4 327 aa6.34□□□□□ -1.39
SRP54-210ENST00000556380 K7EMI3 77 aa6.33□□□□□ -1.4
SRP54-210ENST00000556380 LECT2O14960 151 aa6.33□□□□□ -1.4
SRP54-210ENST00000556380 FCER1GP30273 86 aa6.33□□□□□ -1.4
SRP54-210ENST00000556380 AMMECR1LQ6DCA0 310 aa6.33□□□□□ -1.4
SRP54-210ENST00000556380 RNASEKQ6P5S7 137 aaKnown RBP6.33□□□□□ -1.4
SRP54-210ENST00000556380 NTN5Q8WTR8 489 aaPredicted RBP6.33□□□□□ -1.4
SRP54-210ENST00000556380 TMEM18Q96B42 140 aa6.33□□□□□ -1.4
SRP54-210ENST00000556380 CDC42SE2Q9NRR3 84 aa6.33□□□□□ -1.4
SRP54-210ENST00000556380 CSDC2Q9Y534 153 aaKnown RBP6.33□□□□□ -1.4
SRP54-210ENST00000556380 IGLV10-54A0A075B6I4 117 aa6.32□□□□□ -1.4
SRP54-210ENST00000556380 KRTAP10-1P60331 282 aa6.32□□□□□ -1.4
SRP54-210ENST00000556380 FAM104AQ969W3 186 aa6.32□□□□□ -1.4
SRP54-210ENST00000556380 TIMM21Q9BVV7 248 aa6.32□□□□□ -1.4
SRP54-210ENST00000556380 UBE2D4Q9Y2X8 147 aa6.32□□□□□ -1.4
SRP54-210ENST00000556380 FAT1Q14517 4588 aa6.32□□□□□ -1.4
SRP54-210ENST00000556380 SLC7A5P1Q8MH63 180 aa6.31□□□□□ -1.4
SRP54-210ENST00000556380 ZNF664Q8N3J9 261 aa6.31□□□□□ -1.4
SRP54-210ENST00000556380 Q8N8P6 123 aa6.31□□□□□ -1.4
SRP54-210ENST00000556380 OR5A1Q8NGJ0 315 aa6.31□□□□□ -1.4
SRP54-210ENST00000556380 TMEM101Q96IK0 257 aa6.31□□□□□ -1.4
SRP54-210ENST00000556380 YPEL4Q96NS1 127 aa6.31□□□□□ -1.4
SRP54-210ENST00000556380 IGLV5-52A0A0A0MRZ9 124 aa6.3□□□□□ -1.4
SRP54-210ENST00000556380 LOC389332A0A1B0GUA5 103 aa6.3□□□□□ -1.4
SRP54-210ENST00000556380 USP17L23D6RBM5 183 aa6.3□□□□□ -1.4
SRP54-210ENST00000556380 CDK2AP2O75956 126 aa6.3□□□□□ -1.4
SRP54-210ENST00000556380 GCSHP23434 173 aa6.3□□□□□ -1.4
SRP54-210ENST00000556380 G0S2P27469 103 aa6.3□□□□□ -1.4
SRP54-210ENST00000556380 RPL39P62891 51 aaKnown RBP6.3□□□□□ -1.4
SRP54-210ENST00000556380 KIAA1644Q3SXP7 199 aa6.3□□□□□ -1.4
SRP54-210ENST00000556380 KRTAP17-1Q9BYP8 105 aa6.3□□□□□ -1.4
SRP54-210ENST00000556380 MAP1LC3AQ9H492 121 aa6.3□□□□□ -1.4
SRP54-210ENST00000556380 VPS13BQ7Z7G8 4022 aa6.29□□□□□ -1.4
SRP54-210ENST00000556380 TGIF2-C20orf24A0A0A6YYL0 155 aa6.29□□□□□ -1.4
SRP54-210ENST00000556380 LINC00959A0A1B0GUT2 108 aa6.29□□□□□ -1.4
SRP54-210ENST00000556380 GAGE12HA6NDE8 117 aa6.29□□□□□ -1.4
SRP54-210ENST00000556380 CCL25O15444 150 aa6.29□□□□□ -1.4
SRP54-210ENST00000556380 PRSS1P07477 247 aa6.29□□□□□ -1.4
SRP54-210ENST00000556380 RAB5AP20339 215 aa6.29□□□□□ -1.4
SRP54-210ENST00000556380 CHCHD10Q8WYQ3 142 aaPredicted RBP6.29□□□□□ -1.4
SRP54-210ENST00000556380 ALKBH7Q9BT30 221 aaPredicted RBP6.29□□□□□ -1.4
SRP54-210ENST00000556380 NXT2Q9NPJ8 142 aaKnown RBP6.29□□□□□ -1.4
SRP54-210ENST00000556380 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.28□□□□□ -1.4
SRP54-210ENST00000556380 IGKV3OR2-268A0A0C4DH90 116 aa6.28□□□□□ -1.4
SRP54-210ENST00000556380 IFI27P40305 119 aaPredicted RBP6.28□□□□□ -1.4
SRP54-210ENST00000556380 MRPS36P82909 103 aaKnown RBP6.28□□□□□ -1.4
SRP54-210ENST00000556380 FOXI1Q12951 378 aa6.28□□□□□ -1.4
SRP54-210ENST00000556380 C14orf177Q52M58 125 aa6.28□□□□□ -1.4
SRP54-210ENST00000556380 ORMDL2Q53FV1 153 aa6.28□□□□□ -1.4
SRP54-210ENST00000556380 DGAT2L7PQ6IED9 249 aa6.28□□□□□ -1.4
SRP54-210ENST00000556380 SMCO4Q9NRQ5 59 aa6.28□□□□□ -1.4
SRP54-210ENST00000556380 PYGO1Q9Y3Y4 419 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms