RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 Q8N8P6 123 aa13.41□□□□□ -0.26
RCCD1-205ENST00000556333 BAALCQ8WXS3 180 aa13.41□□□□□ -0.26
RCCD1-205ENST00000556333 MRPL52Q86TS9 123 aaKnown RBP13.4□□□□□ -0.26
RCCD1-205ENST00000556333 MAPKAPK5-AS1Q8N8E1 139 aa13.4□□□□□ -0.26
RCCD1-205ENST00000556333 SMCO4Q9NRQ5 59 aa13.4□□□□□ -0.26
RCCD1-205ENST00000556333 TRAV8-4A0A0B4J246 113 aa13.39□□□□□ -0.27
RCCD1-205ENST00000556333 RPL39P62891 51 aaKnown RBP13.39□□□□□ -0.27
RCCD1-205ENST00000556333 CBLN2Q8IUK8 224 aa13.39□□□□□ -0.27
RCCD1-205ENST00000556333 NXT2Q9NPJ8 142 aaKnown RBP13.39□□□□□ -0.27
RCCD1-205ENST00000556333 UBE2D4Q9Y2X8 147 aa13.39□□□□□ -0.27
RCCD1-205ENST00000556333 FAT2Q9NYQ8 4349 aa13.39□□□□□ -0.27
RCCD1-205ENST00000556333 IFI27P40305 119 aaPredicted RBP13.38□□□□□ -0.27
RCCD1-205ENST00000556333 KRTAP10-2P60368 255 aa13.38□□□□□ -0.27
RCCD1-205ENST00000556333 ZNF664Q8N3J9 261 aa13.38□□□□□ -0.27
RCCD1-205ENST00000556333 ALKBH7Q9BT30 221 aaPredicted RBP13.38□□□□□ -0.27
RCCD1-205ENST00000556333 C16orf90A8MZG2 172 aa13.37□□□□□ -0.27
RCCD1-205ENST00000556333 FUSP35637 526 aaKnown RBP eCLIP13.37□□□□□ -0.27
RCCD1-205ENST00000556333 PRSS3P2Q8NHM4 247 aa13.37□□□□□ -0.27
RCCD1-205ENST00000556333 CDC42SE2Q9NRR3 84 aa13.37□□□□□ -0.27
RCCD1-205ENST00000556333 WFDC2Q14508 124 aa13.36□□□□□ -0.27
RCCD1-205ENST00000556333 Q8N814 137 aa13.36□□□□□ -0.27
RCCD1-205ENST00000556333 ORMDL2Q53FV1 153 aa13.35□□□□□ -0.27
RCCD1-205ENST00000556333 RNASE13Q5GAN3 156 aaKnown RBP13.35□□□□□ -0.27
RCCD1-205ENST00000556333 TIMM21Q9BVV7 248 aa13.35□□□□□ -0.27
RCCD1-205ENST00000556333 PGPEP1Q9NXJ5 209 aa13.35□□□□□ -0.27
RCCD1-205ENST00000556333 CSDC2Q9Y534 153 aaKnown RBP13.35□□□□□ -0.27
RCCD1-205ENST00000556333 PKD1P98161 4303 aa13.34□□□□□ -0.27
RCCD1-205ENST00000556333 YPEL4Q96NS1 127 aa13.34□□□□□ -0.27
RCCD1-205ENST00000556333 K7EMI3 77 aa13.33□□□□□ -0.28
RCCD1-205ENST00000556333 SS18Q15532 418 aa13.33□□□□□ -0.28
RCCD1-205ENST00000556333 Q6ZUT4 128 aa13.33□□□□□ -0.28
RCCD1-205ENST00000556333 SPANXA1Q9NS26 97 aa13.33□□□□□ -0.28
RCCD1-205ENST00000556333 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.32□□□□□ -0.28
RCCD1-205ENST00000556333 LINC00959A0A1B0GUT2 108 aa13.32□□□□□ -0.28
RCCD1-205ENST00000556333 GAGE12HA6NDE8 117 aa13.32□□□□□ -0.28
RCCD1-205ENST00000556333 CDPF1Q6NVV7 123 aa13.32□□□□□ -0.28
RCCD1-205ENST00000556333 KRTAP26-1Q6PEX3 210 aa13.32□□□□□ -0.28
RCCD1-205ENST00000556333 CHCHD10Q8WYQ3 142 aaPredicted RBP13.32□□□□□ -0.28
RCCD1-205ENST00000556333 CYSLTR1Q9Y271 337 aa13.32□□□□□ -0.28
RCCD1-205ENST00000556333 IGLV5-52A0A0A0MRZ9 124 aa13.31□□□□□ -0.28
RCCD1-205ENST00000556333 USP17L23D6RBM5 183 aa13.31□□□□□ -0.28
RCCD1-205ENST00000556333 C2orf66Q6UXQ4 117 aa13.31□□□□□ -0.28
RCCD1-205ENST00000556333 CCL25O15444 150 aa13.3□□□□□ -0.28
RCCD1-205ENST00000556333 C14orf177Q52M58 125 aa13.3□□□□□ -0.28
RCCD1-205ENST00000556333 FA2HQ7L5A8 372 aa13.3□□□□□ -0.28
RCCD1-205ENST00000556333 OPRPNQ99935 248 aaPredicted RBP13.3□□□□□ -0.28
RCCD1-205ENST00000556333 G0S2P27469 103 aa13.29□□□□□ -0.28
RCCD1-205ENST00000556333 XCL1P47992 114 aa13.29□□□□□ -0.28
RCCD1-205ENST00000556333 NTN5Q8WTR8 489 aaPredicted RBP13.29□□□□□ -0.28
RCCD1-205ENST00000556333 TRAV13-1A0A0B4J241 112 aa13.28□□□□□ -0.28
RCCD1-205ENST00000556333 MRPS36P82909 103 aaKnown RBP13.27□□□□□ -0.29
RCCD1-205ENST00000556333 C18orf32Q8TCD1 76 aa13.27□□□□□ -0.29
RCCD1-205ENST00000556333 PYGO1Q9Y3Y4 419 aa13.27□□□□□ -0.29
RCCD1-205ENST00000556333 C1orf196B1AJZ1 125 aa13.26□□□□□ -0.29
RCCD1-205ENST00000556333 TMEM141Q96I45 108 aa13.25□□□□□ -0.29
RCCD1-205ENST00000556333 IGLV4-3A0A075B6K6 122 aa13.24□□□□□ -0.29
RCCD1-205ENST00000556333 IFITM10A6NMD0 228 aa13.24□□□□□ -0.29
RCCD1-205ENST00000556333 GCSHP23434 173 aa13.24□□□□□ -0.29
RCCD1-205ENST00000556333 FOXI1Q12951 378 aa13.24□□□□□ -0.29
RCCD1-205ENST00000556333 Q6ZN92 141 aa13.24□□□□□ -0.29
RCCD1-205ENST00000556333 ABCA13Q86UQ4 5058 aa13.24□□□□□ -0.29
RCCD1-205ENST00000556333 SCO1O75880 301 aa13.23□□□□□ -0.29
RCCD1-205ENST00000556333 CFAP161Q6P656 301 aa13.23□□□□□ -0.29
RCCD1-205ENST00000556333 CD164L2Q6UWJ8 174 aa13.23□□□□□ -0.29
RCCD1-205ENST00000556333 TEX43Q6ZNM6 134 aa13.23□□□□□ -0.29
RCCD1-205ENST00000556333 FAM104AQ969W3 186 aa13.23□□□□□ -0.29
RCCD1-205ENST00000556333 TOMM6Q96B49 74 aa13.23□□□□□ -0.29
RCCD1-205ENST00000556333 AP5S1Q9NUS5 200 aa13.23□□□□□ -0.29
RCCD1-205ENST00000556333 hDV102S1A0JD36 115 aa13.22□□□□□ -0.29
RCCD1-205ENST00000556333 LINC01546A6NGU7 62 aa13.22□□□□□ -0.29
RCCD1-205ENST00000556333 PRSS1P07477 247 aa13.22□□□□□ -0.29
RCCD1-205ENST00000556333 DNAH11Q96DT5 4516 aa13.21□□□□□ -0.29
RCCD1-205ENST00000556333 TRGC2P03986 189 aa13.21□□□□□ -0.29
RCCD1-205ENST00000556333 LINC00614P0C842 121 aa13.21□□□□□ -0.29
RCCD1-205ENST00000556333 RAB5BP61020 215 aa13.21□□□□□ -0.29
RCCD1-205ENST00000556333 SCGB3A1Q96QR1 104 aa13.21□□□□□ -0.29
RCCD1-205ENST00000556333 VCX2Q9H322 139 aa13.21□□□□□ -0.29
RCCD1-205ENST00000556333 PKHD1P08F94 4074 aa13.21□□□□□ -0.29
RCCD1-205ENST00000556333 COLCA2A8K830 154 aa13.2□□□□□ -0.3
RCCD1-205ENST00000556333 C2orf88Q9BSF0 95 aa13.2□□□□□ -0.3
RCCD1-205ENST00000556333 LINC01549A6NIU2 74 aa13.19□□□□□ -0.3
RCCD1-205ENST00000556333 IGIPA6NJ69 53 aa13.19□□□□□ -0.3
RCCD1-205ENST00000556333 MALP21145 153 aa13.19□□□□□ -0.3
RCCD1-205ENST00000556333 HIGD2BQ4VC39 106 aa13.19□□□□□ -0.3
RCCD1-205ENST00000556333 PAPPA-AS1Q5QFB9 102 aa13.19□□□□□ -0.3
RCCD1-205ENST00000556333 TIMM17AQ99595 171 aa13.19□□□□□ -0.3
RCCD1-205ENST00000556333 NPSP0C0P6 89 aa13.18□□□□□ -0.3
RCCD1-205ENST00000556333 KRTAP10-1P60331 282 aa13.18□□□□□ -0.3
RCCD1-205ENST00000556333 ZC2HC1BQ5TFG8 222 aa13.18□□□□□ -0.3
RCCD1-205ENST00000556333 ERASQ7Z444 233 aa13.18□□□□□ -0.3
RCCD1-205ENST00000556333 C15orf56Q8N910 161 aa13.18□□□□□ -0.3
RCCD1-205ENST00000556333 URB1-AS1Q96HZ7 61 aa13.18□□□□□ -0.3
RCCD1-205ENST00000556333 COX7A2LO14548 114 aa13.17□□□□□ -0.3
RCCD1-205ENST00000556333 LINC01620Q4KN68 170 aa13.17□□□□□ -0.3
RCCD1-205ENST00000556333 IGHV1-58A0A0C4DH39 117 aa13.16□□□□□ -0.3
RCCD1-205ENST00000556333 PMCHL1Q16048 86 aa13.16□□□□□ -0.3
RCCD1-205ENST00000556333 C5orf38Q86SI9 138 aa13.16□□□□□ -0.3
RCCD1-205ENST00000556333 AMELXQ99217 191 aa13.15□□□□□ -0.3
RCCD1-205ENST00000556333 LINC00173Q6ZV60 143 aa13.14□□□□□ -0.31
RCCD1-205ENST00000556333 BAGE3Q86Y29 109 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms