RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 UFSP1Q6NVU6 142 aa3.14□□□□□ -1.91
ATXN3-238ENST00000556288 RASL11AQ6T310 242 aa3.14□□□□□ -1.91
ATXN3-238ENST00000556288 FAM231DQ6ZW35 169 aa3.14□□□□□ -1.91
ATXN3-238ENST00000556288 DAZ4Q86SG3 579 aaKnown RBP3.14□□□□□ -1.91
ATXN3-238ENST00000556288 TSKUQ8WUA8 353 aa3.14□□□□□ -1.91
ATXN3-238ENST00000556288 GTSF1Q8WW33 167 aa3.14□□□□□ -1.91
ATXN3-238ENST00000556288 ISOC2Q96AB3 205 aa3.14□□□□□ -1.91
ATXN3-238ENST00000556288 IMMP2LQ96T52 175 aa3.14□□□□□ -1.91
ATXN3-238ENST00000556288 UPK3BQ9BT76 320 aa3.14□□□□□ -1.91
ATXN3-238ENST00000556288 NIT2Q9NQR4 276 aa3.14□□□□□ -1.91
ATXN3-238ENST00000556288 DAZ3Q9NR90 486 aaKnown RBP3.14□□□□□ -1.91
ATXN3-238ENST00000556288 KLK12Q9UKR0 248 aa3.14□□□□□ -1.91
ATXN3-238ENST00000556288 IGKV2D-24A0A075B6R9 120 aa3.13□□□□□ -1.91
ATXN3-238ENST00000556288 TRAV9-1A0A075B6T8 112 aa3.13□□□□□ -1.91
ATXN3-238ENST00000556288 IGKV3OR2-268A0A0C4DH90 116 aa3.13□□□□□ -1.91
ATXN3-238ENST00000556288 TRBV10-1A0A0K0K1A3 114 aa3.13□□□□□ -1.91
ATXN3-238ENST00000556288 M0QY20 66 aa3.13□□□□□ -1.91
ATXN3-238ENST00000556288 ANGP03950 147 aaKnown RBP3.13□□□□□ -1.91
ATXN3-238ENST00000556288 FUSP35637 526 aaKnown RBP eCLIP3.13□□□□□ -1.91
ATXN3-238ENST00000556288 UBE2D3P61077 147 aa3.13□□□□□ -1.91
ATXN3-238ENST00000556288 UBE2D2P62837 147 aa3.13□□□□□ -1.91
ATXN3-238ENST00000556288 MRPL54Q6P161 138 aaKnown RBP3.13□□□□□ -1.91
ATXN3-238ENST00000556288 SPATA12Q7Z6I5 190 aa3.13□□□□□ -1.91
ATXN3-238ENST00000556288 C10orf126Q8N4M7 172 aa3.13□□□□□ -1.91
ATXN3-238ENST00000556288 GATD1Q8NB37 220 aa3.13□□□□□ -1.91
ATXN3-238ENST00000556288 NUP35Q8NFH5 326 aa3.13□□□□□ -1.91
ATXN3-238ENST00000556288 UBE2WQ96B02 151 aa3.13□□□□□ -1.91
ATXN3-238ENST00000556288 RPL39LQ96EH5 51 aaKnown RBP3.13□□□□□ -1.91
ATXN3-238ENST00000556288 DNAJC30Q96LL9 226 aa3.13□□□□□ -1.91
ATXN3-238ENST00000556288 NAT8BQ9UHF3 227 aa3.13□□□□□ -1.91
ATXN3-238ENST00000556288 KIF25-AS1Q9Y6Z4 181 aa3.13□□□□□ -1.91
ATXN3-238ENST00000556288 V9GYV3 84 aa3.13□□□□□ -1.91
ATXN3-238ENST00000556288 TRBV25-1A0A075B6N4 114 aa3.12□□□□□ -1.91
ATXN3-238ENST00000556288 TRBV6-8A0A0A6YYG3 113 aa3.12□□□□□ -1.91
ATXN3-238ENST00000556288 IGHV1-24A0A0C4DH33 117 aa3.12□□□□□ -1.91
ATXN3-238ENST00000556288 TSTD3H0UI37 97 aa3.12□□□□□ -1.91
ATXN3-238ENST00000556288 SMKR1H3BMG3 65 aa3.12□□□□□ -1.91
ATXN3-238ENST00000556288 LECT2O14960 151 aa3.12□□□□□ -1.91
ATXN3-238ENST00000556288 CRPP02741 224 aa3.12□□□□□ -1.91
ATXN3-238ENST00000556288 DNAH10OSP0CZ25 163 aa3.12□□□□□ -1.91
ATXN3-238ENST00000556288 CKS2P33552 79 aa3.12□□□□□ -1.91
ATXN3-238ENST00000556288 CTRLP40313 264 aa3.12□□□□□ -1.91
ATXN3-238ENST00000556288 PKIAP61925 76 aa3.12□□□□□ -1.91
ATXN3-238ENST00000556288 COTL1Q14019 142 aa3.12□□□□□ -1.91
ATXN3-238ENST00000556288 TMEM97Q5BJF2 176 aa3.12□□□□□ -1.91
ATXN3-238ENST00000556288 AMMECR1LQ6DCA0 310 aa3.12□□□□□ -1.91
ATXN3-238ENST00000556288 RNASEKQ6P5S7 137 aaKnown RBP3.12□□□□□ -1.91
ATXN3-238ENST00000556288 CLPSL2Q6UWE3 100 aa3.12□□□□□ -1.91
ATXN3-238ENST00000556288 MRPL52Q86TS9 123 aaKnown RBP3.12□□□□□ -1.91
ATXN3-238ENST00000556288 AMN1Q8IY45 258 aa3.12□□□□□ -1.91
ATXN3-238ENST00000556288 LYSTQ99698 3801 aa3.12□□□□□ -1.91
ATXN3-238ENST00000556288 GFRA4Q9GZZ7 299 aa3.12□□□□□ -1.91
ATXN3-238ENST00000556288 ST20Q9HBF5 79 aa3.12□□□□□ -1.91
ATXN3-238ENST00000556288 TRAV8-3A0A0A6YYJ7 113 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 SMIM27A0A1W2PRY6 76 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 C16orf90A8MZG2 172 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 LINC00587B1AMM8 73 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 IBA57-AS1B1ANH7 110 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 PHOX2AO14813 284 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 HIST1H2BKO60814 126 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 NCR2O95944 276 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 HIST1H2BJP06899 126 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 RAB4AP20338 218 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 HIST1H2BOP23527 126 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 FCER1GP30273 86 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 HIST1H2BBP33778 126 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 NDUFA6P56556 154 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 HIST1H2BDP58876 126 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 HIST1H2BCP62807 126 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 JOSD1Q15040 202 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-238ENST00000556288 HIST2H2BEQ16778 126 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 COX19Q49B96 90 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 LINC01556Q5JQF7 62 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-238ENST00000556288 NOTCH2NLQ7Z3S9 236 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 NIT1Q86X76 327 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 HIST3H2BBQ8N257 126 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 LINC00469Q8N7U9 141 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 MAPKAPK5-AS1Q8N8E1 139 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 Q8N976 141 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 BAALCQ8WXS3 180 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 HIST1H2BHQ93079 126 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 RMI2Q96E14 147 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 PACRGQ96M98 296 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-238ENST00000556288 HIST1H2BNQ99877 126 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 HIST1H2BMQ99879 126 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 TMEM243Q9BU79 118 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 TMEM191AQ9H0A3 160 aa3.11□□□□□ -1.91
ATXN3-238ENST00000556288 IGLV10-54A0A075B6I4 117 aa3.1□□□□□ -1.91
ATXN3-238ENST00000556288 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-238ENST00000556288 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-238ENST00000556288 LOC389332A0A1B0GUA5 103 aa3.1□□□□□ -1.91
ATXN3-238ENST00000556288 IGKV2-29A2NJV5 120 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-238ENST00000556288 FAM231BA6NCW3 169 aa3.1□□□□□ -1.91
ATXN3-238ENST00000556288 SDHAF1A6NFY7 115 aa3.1□□□□□ -1.91
ATXN3-238ENST00000556288 I3L3M4 83 aa3.1□□□□□ -1.91
ATXN3-238ENST00000556288 K7EP13 123 aa3.1□□□□□ -1.91
ATXN3-238ENST00000556288 HLA-DQA1P01909 254 aa3.1□□□□□ -1.91
ATXN3-238ENST00000556288 APCSP02743 223 aa3.1□□□□□ -1.91
ATXN3-238ENST00000556288 TRGC2P03986 189 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms