RNA–Protein interactions for RNA: ENST00000556119.5

ABCD4-224, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-224ENST00000556119 GAGE2EQ4V326 116 aa7.54□□□□□ -1.2
ABCD4-224ENST00000556119 LINC00337Q8N6G1 96 aa7.54□□□□□ -1.2
ABCD4-224ENST00000556119 GATD1Q8NB37 220 aa7.54□□□□□ -1.2
ABCD4-224ENST00000556119 OR2D3Q8NGH3 330 aa7.54□□□□□ -1.2
ABCD4-224ENST00000556119 GAGE2DQ9UEU5 116 aa7.54□□□□□ -1.2
ABCD4-224ENST00000556119 CTXND1A0A1B0GTU2 59 aa7.53□□□□□ -1.2
ABCD4-224ENST00000556119 FAM240BA0A1B0GVZ2 78 aa7.53□□□□□ -1.2
ABCD4-224ENST00000556119 INMT-MINDY4F8WBC2 141 aa7.53□□□□□ -1.2
ABCD4-224ENST00000556119 SPAG11BQ08648 103 aa7.53□□□□□ -1.2
ABCD4-224ENST00000556119 C10orf25Q5T742 122 aa7.53□□□□□ -1.2
ABCD4-224ENST00000556119 C5orf38Q86SI9 138 aa7.53□□□□□ -1.2
ABCD4-224ENST00000556119 RPL39LQ96EH5 51 aaKnown RBP7.53□□□□□ -1.2
ABCD4-224ENST00000556119 C1orf196B1AJZ1 125 aa7.52□□□□□ -1.21
ABCD4-224ENST00000556119 FHITP49789 147 aa7.52□□□□□ -1.21
ABCD4-224ENST00000556119 SEC61BP60468 96 aaKnown RBP7.52□□□□□ -1.21
ABCD4-224ENST00000556119 KRTAP13-3Q3SY46 172 aa7.52□□□□□ -1.21
ABCD4-224ENST00000556119 MZT2BQ6NZ67 158 aa7.52□□□□□ -1.21
ABCD4-224ENST00000556119 BAGE2Q86Y30 109 aa7.52□□□□□ -1.21
ABCD4-224ENST00000556119 TCEAL7Q9BRU2 100 aa7.52□□□□□ -1.21
ABCD4-224ENST00000556119 TRGC1P0CF51 173 aa7.51□□□□□ -1.21
ABCD4-224ENST00000556119 LINC00242Q5T6M2 205 aa7.51□□□□□ -1.21
ABCD4-224ENST00000556119 CST9LP1Q5W188 147 aa7.51□□□□□ -1.21
ABCD4-224ENST00000556119 STOML3Q8TAV4 291 aa7.51□□□□□ -1.21
ABCD4-224ENST00000556119 CTDSP1Q9GZU7 261 aa7.51□□□□□ -1.21
ABCD4-224ENST00000556119 SMDT1Q9H4I9 107 aa7.51□□□□□ -1.21
ABCD4-224ENST00000556119 SDHAF1A6NFY7 115 aa7.5□□□□□ -1.21
ABCD4-224ENST00000556119 DEFA1P59665 94 aa7.5□□□□□ -1.21
ABCD4-224ENST00000556119 C6orf48Q9UBA6 75 aa7.5□□□□□ -1.21
ABCD4-224ENST00000556119 NUPR1O60356 82 aa7.49□□□□□ -1.21
ABCD4-224ENST00000556119 S100A9P06702 114 aaKnown RBP7.49□□□□□ -1.21
ABCD4-224ENST00000556119 CTAG1AP78358 180 aa7.49□□□□□ -1.21
ABCD4-224ENST00000556119 UNQ6190/PRO20217Q6UXQ8 127 aa7.49□□□□□ -1.21
ABCD4-224ENST00000556119 MRPL52Q86TS9 123 aaKnown RBP7.49□□□□□ -1.21
ABCD4-224ENST00000556119 TMEM241Q24JQ0 296 aa7.48□□□□□ -1.21
ABCD4-224ENST00000556119 C9orf129Q5T035 196 aaKnown RBP7.48□□□□□ -1.21
ABCD4-224ENST00000556119 LYZL1Q6UWQ5 148 aa7.48□□□□□ -1.21
ABCD4-224ENST00000556119 OR10D4PQ8NGN7 298 aa7.48□□□□□ -1.21
ABCD4-224ENST00000556119 CCDC32Q9BV29 185 aa7.48□□□□□ -1.21
ABCD4-224ENST00000556119 ALG5Q9Y673 324 aa7.48□□□□□ -1.21
ABCD4-224ENST00000556119 F2Z2F3 143 aa7.47□□□□□ -1.21
ABCD4-224ENST00000556119 F8WDY8 70 aa7.47□□□□□ -1.21
ABCD4-224ENST00000556119 I3L3M4 83 aa7.47□□□□□ -1.21
ABCD4-224ENST00000556119 NDUFA1O15239 70 aa7.47□□□□□ -1.21
ABCD4-224ENST00000556119 RPL28P46779 137 aaKnown RBP7.47□□□□□ -1.21
ABCD4-224ENST00000556119 USH2AO75445 5202 aa7.46□□□□□ -1.21
ABCD4-224ENST00000556119 SCO2A0A1W2PP80 73 aa7.46□□□□□ -1.22
ABCD4-224ENST00000556119 PMCHP20382 165 aa7.46□□□□□ -1.22
ABCD4-224ENST00000556119 FP248Q71RG6 208 aaPredicted RBP7.46□□□□□ -1.22
ABCD4-224ENST00000556119 ORAOV1Q8WV07 137 aa7.46□□□□□ -1.22
ABCD4-224ENST00000556119 MRAP2Q96G30 205 aa7.46□□□□□ -1.22
ABCD4-224ENST00000556119 TRAV13-1A0A0B4J241 112 aa7.45□□□□□ -1.22
ABCD4-224ENST00000556119 MAP1LC3B2A6NCE7 125 aa7.45□□□□□ -1.22
ABCD4-224ENST00000556119 PAGE4O60829 102 aa7.45□□□□□ -1.22
ABCD4-224ENST00000556119 RPS20P60866 119 aaKnown RBP7.45□□□□□ -1.22
ABCD4-224ENST00000556119 FAM229BQ4G0N7 80 aa7.45□□□□□ -1.22
ABCD4-224ENST00000556119 RNASE13Q5GAN3 156 aaKnown RBP7.45□□□□□ -1.22
ABCD4-224ENST00000556119 MAP1LC3BQ9GZQ8 125 aa7.45□□□□□ -1.22
ABCD4-224ENST00000556119 FLGP20930 4061 aaPredicted RBP7.45□□□□□ -1.22
ABCD4-224ENST00000556119 CTRLP40313 264 aa7.44□□□□□ -1.22
ABCD4-224ENST00000556119 TMEM242Q9NWH2 141 aa7.44□□□□□ -1.22
ABCD4-224ENST00000556119 C22orf24Q9Y442 160 aa7.44□□□□□ -1.22
ABCD4-224ENST00000556119 TWIST1Q15672 202 aa7.43□□□□□ -1.22
ABCD4-224ENST00000556119 TMUB2Q71RG4 321 aa7.43□□□□□ -1.22
ABCD4-224ENST00000556119 RNASE7Q9H1E1 156 aaKnown RBP7.43□□□□□ -1.22
ABCD4-224ENST00000556119 FCGBPQ9Y6R7 5405 aaPredicted RBP7.42□□□□□ -1.22
ABCD4-224ENST00000556119 IGKV2D-26A0A0A0MRZ7 120 aa7.42□□□□□ -1.22
ABCD4-224ENST00000556119 BCE1O60756 84 aa7.42□□□□□ -1.22
ABCD4-224ENST00000556119 FOXA3P55318 350 aaPredicted RBP7.42□□□□□ -1.22
ABCD4-224ENST00000556119 RPL7L1Q6DKI1 246 aaKnown RBP7.42□□□□□ -1.22
ABCD4-224ENST00000556119 C9orf62Q8N4C0 152 aa7.42□□□□□ -1.22
ABCD4-224ENST00000556119 TRBV6-5A0A0K0K1A5 114 aa7.41□□□□□ -1.22
ABCD4-224ENST00000556119 NDUFC2-KCTD14E9PQ53 114 aa7.41□□□□□ -1.22
ABCD4-224ENST00000556119 SSNA1O43805 119 aa7.41□□□□□ -1.22
ABCD4-224ENST00000556119 CYTL1Q9NRR1 136 aa7.41□□□□□ -1.22
ABCD4-224ENST00000556119 IFNA1P01562 189 aa7.4□□□□□ -1.22
ABCD4-224ENST00000556119 RPL35P42766 123 aaKnown RBP7.4□□□□□ -1.22
ABCD4-224ENST00000556119 AKR1C8PQ5T2L2 129 aa7.4□□□□□ -1.22
ABCD4-224ENST00000556119 TEX261Q6UWH6 196 aa7.4□□□□□ -1.22
ABCD4-224ENST00000556119 CNFNQ9BYD5 112 aa7.4□□□□□ -1.22
ABCD4-224ENST00000556119 CSDC2Q9Y534 153 aaKnown RBP7.4□□□□□ -1.22
ABCD4-224ENST00000556119 IGHV3OR16-9A0A0B4J2B5 98 aa7.39□□□□□ -1.23
ABCD4-224ENST00000556119 C7orf77A4D0Y5 90 aa7.39□□□□□ -1.23
ABCD4-224ENST00000556119 KIAA0087Q14695 138 aa7.39□□□□□ -1.23
ABCD4-224ENST00000556119 LBHQ53QV2 105 aaPredicted RBP7.39□□□□□ -1.23
ABCD4-224ENST00000556119 ENKURQ8TC29 256 aa7.39□□□□□ -1.23
ABCD4-224ENST00000556119 UBE2D4Q9Y2X8 147 aa7.39□□□□□ -1.23
ABCD4-224ENST00000556119 XKRY2A2RUG3 117 aa7.38□□□□□ -1.23
ABCD4-224ENST00000556119 KRTAP13-1Q8IUC0 172 aa7.38□□□□□ -1.23
ABCD4-224ENST00000556119 FAM210AQ96ND0 272 aa7.38□□□□□ -1.23
ABCD4-224ENST00000556119 TRBV30A0A0K0K1B3 111 aa7.37□□□□□ -1.23
ABCD4-224ENST00000556119 POLR2KP53803 58 aaKnown RBP7.37□□□□□ -1.23
ABCD4-224ENST00000556119 Q6ZUT4 128 aa7.37□□□□□ -1.23
ABCD4-224ENST00000556119 ST20Q9HBF5 79 aa7.37□□□□□ -1.23
ABCD4-224ENST00000556119 C2orf82Q6UX34 121 aa7.36□□□□□ -1.23
ABCD4-224ENST00000556119 C3orf22Q8N5N4 141 aa7.36□□□□□ -1.23
ABCD4-224ENST00000556119 TRBV27A0A0K0K1C4 114 aa7.35□□□□□ -1.23
ABCD4-224ENST00000556119 M0R2T5 61 aa7.35□□□□□ -1.23
ABCD4-224ENST00000556119 PFDN1O60925 122 aa7.35□□□□□ -1.23
ABCD4-224ENST00000556119 CENPWQ5EE01 88 aa7.35□□□□□ -1.23
ABCD4-224ENST00000556119 XP32Q5T750 250 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms