RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067		H7C423	109 aa		3.91	□□□□□ -1.78
ATL1-208	ENST00000556067	NPS	P0C0P6	89 aa		3.91	□□□□□ -1.78
ATL1-208	ENST00000556067	PKIA	P61925	76 aa		3.91	□□□□□ -1.78
ATL1-208	ENST00000556067	MRPL23	Q16540	153 aa	Known RBP	3.91	□□□□□ -1.78
ATL1-208	ENST00000556067	LGALS9C	Q6DKI2	356 aa		3.91	□□□□□ -1.78
ATL1-208	ENST00000556067	LINC00173	Q6ZV60	143 aa		3.91	□□□□□ -1.78
ATL1-208	ENST00000556067	ATP6V0E2	Q8NHE4	81 aa		3.91	□□□□□ -1.78
ATL1-208	ENST00000556067	DEFB104A	Q8WTQ1	72 aa		3.91	□□□□□ -1.78
ATL1-208	ENST00000556067	TIMM17A	Q99595	171 aa		3.91	□□□□□ -1.78
ATL1-208	ENST00000556067	TM2D3	Q9BRN9	247 aa		3.91	□□□□□ -1.78
ATL1-208	ENST00000556067	TMEM243	Q9BU79	118 aa		3.91	□□□□□ -1.78
ATL1-208	ENST00000556067	GTSF1L	Q9H1H1	148 aa		3.91	□□□□□ -1.78
ATL1-208	ENST00000556067	VCX2	Q9H322	139 aa		3.91	□□□□□ -1.78
ATL1-208	ENST00000556067	SPANXA1	Q9NS26	97 aa		3.91	□□□□□ -1.78
ATL1-208	ENST00000556067	CELA1	Q9UNI1	258 aa		3.91	□□□□□ -1.78
ATL1-208	ENST00000556067	ICOS	Q9Y6W8	199 aa		3.91	□□□□□ -1.78
ATL1-208	ENST00000556067	TRAV26-1	A0A087WT03	109 aa		3.9	□□□□□ -1.79
ATL1-208	ENST00000556067	TRAV12-1	A0A0B4J245	112 aa		3.9	□□□□□ -1.79
ATL1-208	ENST00000556067	DPM2	O94777	84 aa		3.9	□□□□□ -1.79
ATL1-208	ENST00000556067	NHLRC4	P0CG21	123 aa	Predicted RBP	3.9	□□□□□ -1.79
ATL1-208	ENST00000556067	PLN	P26678	52 aa		3.9	□□□□□ -1.79
ATL1-208	ENST00000556067	PMVK	Q15126	192 aa		3.9	□□□□□ -1.79
ATL1-208	ENST00000556067	C12orf74	Q32Q52	190 aa		3.9	□□□□□ -1.79
ATL1-208	ENST00000556067	LINC01545	Q5VT33	79 aa		3.9	□□□□□ -1.79
ATL1-208	ENST00000556067	OR5A1	Q8NGJ0	315 aa		3.9	□□□□□ -1.79
ATL1-208	ENST00000556067	B9D2	Q9BPU9	175 aa		3.9	□□□□□ -1.79
ATL1-208	ENST00000556067	C2orf88	Q9BSF0	95 aa		3.9	□□□□□ -1.79
ATL1-208	ENST00000556067	CHCHD5	Q9BSY4	110 aa		3.9	□□□□□ -1.79
ATL1-208	ENST00000556067	CHTOP	Q9Y3Y2	248 aa	Known RBP	3.9	□□□□□ -1.79
ATL1-208	ENST00000556067	PYGO1	Q9Y3Y4	419 aa		3.9	□□□□□ -1.79
ATL1-208	ENST00000556067	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	3.89	□□□□□ -1.79
ATL1-208	ENST00000556067	TRAV9-2	A0A087WT02	112 aa		3.89	□□□□□ -1.79
ATL1-208	ENST00000556067		A0A087WX48	190 aa		3.89	□□□□□ -1.79
ATL1-208	ENST00000556067	DEFB131B	A0A096LNP1	70 aa		3.89	□□□□□ -1.79
ATL1-208	ENST00000556067	TRBV6-8	A0A0A6YYG3	113 aa		3.89	□□□□□ -1.79
ATL1-208	ENST00000556067	TRAV10	A0A0B4J240	114 aa		3.89	□□□□□ -1.79
ATL1-208	ENST00000556067	LOC100131303	A0A0U1RQF7	123 aa		3.89	□□□□□ -1.79
ATL1-208	ENST00000556067	IGKV2-29	A2NJV5	120 aa	Predicted RBP	3.89	□□□□□ -1.79
ATL1-208	ENST00000556067	TMEM262	E9PQX1	116 aa		3.89	□□□□□ -1.79
ATL1-208	ENST00000556067		H3BNG1	76 aa		3.89	□□□□□ -1.79
ATL1-208	ENST00000556067	IGKC	P01834	107 aa		3.89	□□□□□ -1.79
ATL1-208	ENST00000556067	RPL39	P62891	51 aa	Known RBP	3.89	□□□□□ -1.79
ATL1-208	ENST00000556067	TEX43	Q6ZNM6	134 aa		3.89	□□□□□ -1.79
ATL1-208	ENST00000556067	BAALC	Q8WXS3	180 aa		3.89	□□□□□ -1.79
ATL1-208	ENST00000556067	TIMM21	Q9BVV7	248 aa		3.89	□□□□□ -1.79
ATL1-208	ENST00000556067	TRAV8-6	A0A0B4J262	113 aa		3.88	□□□□□ -1.79
ATL1-208	ENST00000556067	IGIP	A6NJ69	53 aa		3.88	□□□□□ -1.79
ATL1-208	ENST00000556067	PCP4L1	A6NKN8	68 aa		3.88	□□□□□ -1.79
ATL1-208	ENST00000556067		F8VRH5	84 aa		3.88	□□□□□ -1.79
ATL1-208	ENST00000556067	FGF6	P10767	208 aa		3.88	□□□□□ -1.79
ATL1-208	ENST00000556067	ZNF25	P17030	456 aa	Predicted RBP	3.88	□□□□□ -1.79
ATL1-208	ENST00000556067	NANOS2	P60321	138 aa	Known RBP	3.88	□□□□□ -1.79
ATL1-208	ENST00000556067	HERVK_113	P61574	105 aa		3.88	□□□□□ -1.79
ATL1-208	ENST00000556067	SEC11A	P67812	179 aa		3.88	□□□□□ -1.79
ATL1-208	ENST00000556067	SPATA45	Q537H7	98 aa		3.88	□□□□□ -1.79
ATL1-208	ENST00000556067		Q6ZTC4	211 aa		3.88	□□□□□ -1.79
ATL1-208	ENST00000556067	ATOH7	Q8N100	152 aa		3.88	□□□□□ -1.79
ATL1-208	ENST00000556067	PMCHL2	Q9BQD1	86 aa		3.88	□□□□□ -1.79
ATL1-208	ENST00000556067	CHCHD7	Q9BUK0	85 aa		3.88	□□□□□ -1.79
ATL1-208	ENST00000556067	CST9L	Q9H4G1	147 aa		3.88	□□□□□ -1.79
ATL1-208	ENST00000556067		Q9UF83	564 aa		3.88	□□□□□ -1.79
ATL1-208	ENST00000556067	PAM16	Q9Y3D7	125 aa		3.88	□□□□□ -1.79
ATL1-208	ENST00000556067	IGLV4-3	A0A075B6K6	122 aa		3.87	□□□□□ -1.79
ATL1-208	ENST00000556067		A0A096LPF7	62 aa		3.87	□□□□□ -1.79
ATL1-208	ENST00000556067	MRPS36	P82909	103 aa	Known RBP	3.87	□□□□□ -1.79
ATL1-208	ENST00000556067	GAGE6	Q13070	117 aa		3.87	□□□□□ -1.79
ATL1-208	ENST00000556067	MRPL52	Q86TS9	123 aa	Known RBP	3.87	□□□□□ -1.79
ATL1-208	ENST00000556067	ZNF664	Q8N3J9	261 aa		3.87	□□□□□ -1.79
ATL1-208	ENST00000556067		Q8N976	141 aa		3.87	□□□□□ -1.79
ATL1-208	ENST00000556067	VSIG2	Q96IQ7	327 aa		3.87	□□□□□ -1.79
ATL1-208	ENST00000556067	GEMIN7	Q9H840	131 aa	Known RBP	3.87	□□□□□ -1.79
ATL1-208	ENST00000556067	MRPL35	Q9NZE8	188 aa	Known RBP	3.87	□□□□□ -1.79
ATL1-208	ENST00000556067	UBE2D4	Q9Y2X8	147 aa		3.87	□□□□□ -1.79
ATL1-208	ENST00000556067	CSDC2	Q9Y534	153 aa	Known RBP	3.87	□□□□□ -1.79
ATL1-208	ENST00000556067		H3BRM9	83 aa		3.86	□□□□□ -1.79
ATL1-208	ENST00000556067	LINC00694	P0DN24	101 aa		3.86	□□□□□ -1.79
ATL1-208	ENST00000556067	DEFA6	Q01524	100 aa		3.86	□□□□□ -1.79
ATL1-208	ENST00000556067	TMEM170B	Q5T4T1	132 aa		3.86	□□□□□ -1.79
ATL1-208	ENST00000556067	LELP1	Q5T871	98 aa		3.86	□□□□□ -1.79
ATL1-208	ENST00000556067	CEMP1	Q6PRD7	247 aa	Predicted RBP	3.86	□□□□□ -1.79
ATL1-208	ENST00000556067	NTM-AS1	Q6ZSK4	140 aa		3.86	□□□□□ -1.79
ATL1-208	ENST00000556067	C15orf53	Q8NAA6	179 aa		3.86	□□□□□ -1.79
ATL1-208	ENST00000556067	PRO1933	Q9H354	126 aa		3.86	□□□□□ -1.79
ATL1-208	ENST00000556067	ANK2	Q01484	3957 aa		3.86	□□□□□ -1.79
ATL1-208	ENST00000556067	TRRAP	Q9Y4A5	3859 aa		3.85	□□□□□ -1.79
ATL1-208	ENST00000556067	hDV102S1	A0JD36	115 aa		3.85	□□□□□ -1.79
ATL1-208	ENST00000556067	NMU	P48645	174 aa		3.85	□□□□□ -1.79
ATL1-208	ENST00000556067	TIRAP	P58753	221 aa		3.85	□□□□□ -1.79
ATL1-208	ENST00000556067	HERVK_113	P63121	156 aa		3.85	□□□□□ -1.79
ATL1-208	ENST00000556067	SS18	Q15532	418 aa		3.85	□□□□□ -1.79
ATL1-208	ENST00000556067	ZC2HC1B	Q5TFG8	222 aa		3.85	□□□□□ -1.79
ATL1-208	ENST00000556067	SLC25A34	Q6PIV7	304 aa		3.85	□□□□□ -1.79
ATL1-208	ENST00000556067	LYPD5	Q6UWN5	251 aa		3.85	□□□□□ -1.79
ATL1-208	ENST00000556067		Q6ZUT4	128 aa		3.85	□□□□□ -1.79
ATL1-208	ENST00000556067	OPRPN	Q99935	248 aa	Predicted RBP	3.85	□□□□□ -1.79
ATL1-208	ENST00000556067	CHAC1	Q9BUX1	264 aa		3.85	□□□□□ -1.79
ATL1-208	ENST00000556067	CDC42SE2	Q9NRR3	84 aa		3.85	□□□□□ -1.79
ATL1-208	ENST00000556067	UQCR10	Q9UDW1	63 aa		3.85	□□□□□ -1.79
ATL1-208	ENST00000556067	MGAM2	Q2M2H8	2515 aa		3.85	□□□□□ -1.79
ATL1-208	ENST00000556067	PKD1L1	Q8TDX9	2849 aa		3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms