RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.06■□□□□ 0
CDKN3-208ENST00000555837 USP17L23D6RBM5 183 aa15.06■□□□□ 0
CDKN3-208ENST00000555837 SS18Q15532 418 aa15.06■□□□□ 0
CDKN3-208ENST00000555837 TIMM21Q9BVV7 248 aa15.06■□□□□ 0
CDKN3-208ENST00000555837 NPYP01303 97 aa15.05■□□□□ -0
CDKN3-208ENST00000555837 WFDC2Q14508 124 aa15.05■□□□□ -0
CDKN3-208ENST00000555837 ZNF664Q8N3J9 261 aa15.05■□□□□ -0
CDKN3-208ENST00000555837 IGKV3OR2-268A0A0C4DH90 116 aa15.04■□□□□ -0
CDKN3-208ENST00000555837 PRSS47A8MTI9 375 aa15.04■□□□□ -0
CDKN3-208ENST00000555837 K7EMI3 77 aa15.04■□□□□ -0
CDKN3-208ENST00000555837 G0S2P27469 103 aa15.04■□□□□ -0
CDKN3-208ENST00000555837 RPS10P5Q9NQ39 176 aa15.04■□□□□ -0
CDKN3-208ENST00000555837 CDC42SE2Q9NRR3 84 aa15.04■□□□□ -0
CDKN3-208ENST00000555837 AP5S1Q9NUS5 200 aa15.04■□□□□ -0
CDKN3-208ENST00000555837 SNAPINO95295 136 aa15.03■□□□□ -0
CDKN3-208ENST00000555837 SVBPQ8N300 66 aa15.03■□□□□ -0
CDKN3-208ENST00000555837 SPANXA1Q9NS26 97 aa15.02■□□□□ -0
CDKN3-208ENST00000555837 DYNC1H1Q14204 4646 aaKnown RBP15.02□□□□□ -0.01
CDKN3-208ENST00000555837 MT-ND6P03923 174 aa15.01□□□□□ -0.01
CDKN3-208ENST00000555837 FUSP35637 526 aaKnown RBP eCLIP15.01□□□□□ -0.01
CDKN3-208ENST00000555837 KRTAP10-1P60331 282 aa15.01□□□□□ -0.01
CDKN3-208ENST00000555837 KRTAP26-1Q6PEX3 210 aa15.01□□□□□ -0.01
CDKN3-208ENST00000555837 CHCHD10Q8WYQ3 142 aaPredicted RBP15.01□□□□□ -0.01
CDKN3-208ENST00000555837 GNB1LQ9BYB4 327 aa15.01□□□□□ -0.01
CDKN3-208ENST00000555837 UBE2D4Q9Y2X8 147 aa15.01□□□□□ -0.01
CDKN3-208ENST00000555837 TRAV16A0A0A6YYK6 109 aaPredicted RBP15□□□□□ -0.01
CDKN3-208ENST00000555837 GAGE12HA6NDE8 117 aa15□□□□□ -0.01
CDKN3-208ENST00000555837 C1orf196B1AJZ1 125 aa15□□□□□ -0.01
CDKN3-208ENST00000555837 NXT2Q9NPJ8 142 aaKnown RBP15□□□□□ -0.01
CDKN3-208ENST00000555837 LINC00959A0A1B0GUT2 108 aa14.98□□□□□ -0.01
CDKN3-208ENST00000555837 APOC3P02656 99 aa14.98□□□□□ -0.01
CDKN3-208ENST00000555837 ORMDL2Q53FV1 153 aa14.98□□□□□ -0.01
CDKN3-208ENST00000555837 hDV102S1A0JD36 115 aa14.97□□□□□ -0.01
CDKN3-208ENST00000555837 IFI27P40305 119 aaPredicted RBP14.97□□□□□ -0.01
CDKN3-208ENST00000555837 Q8N8P6 123 aa14.97□□□□□ -0.01
CDKN3-208ENST00000555837 LOC389332A0A1B0GUA5 103 aa14.95□□□□□ -0.02
CDKN3-208ENST00000555837 PRSS1P07477 247 aa14.95□□□□□ -0.02
CDKN3-208ENST00000555837 MRPS36P82909 103 aaKnown RBP14.95□□□□□ -0.02
CDKN3-208ENST00000555837 CD164L2Q6UWJ8 174 aa14.95□□□□□ -0.02
CDKN3-208ENST00000555837 XCL1P47992 114 aa14.94□□□□□ -0.02
CDKN3-208ENST00000555837 LINC01549A6NIU2 74 aa14.93□□□□□ -0.02
CDKN3-208ENST00000555837 CNBPP62633 177 aaKnown RBP14.93□□□□□ -0.02
CDKN3-208ENST00000555837 CYSLTR1Q9Y271 337 aa14.93□□□□□ -0.02
CDKN3-208ENST00000555837 PKIGQ9Y2B9 76 aa14.93□□□□□ -0.02
CDKN3-208ENST00000555837 PYGO1Q9Y3Y4 419 aa14.93□□□□□ -0.02
CDKN3-208ENST00000555837 NPSP0C0P6 89 aa14.92□□□□□ -0.02
CDKN3-208ENST00000555837 Q8N1X5 172 aa14.92□□□□□ -0.02
CDKN3-208ENST00000555837 KIAA1109Q2LD37 5005 aa14.92□□□□□ -0.02
CDKN3-208ENST00000555837 IGHV1-58A0A0C4DH39 117 aa14.91□□□□□ -0.02
CDKN3-208ENST00000555837 PAPPA-AS1Q5QFB9 102 aa14.91□□□□□ -0.02
CDKN3-208ENST00000555837 C9orf163Q8N9P6 203 aa14.91□□□□□ -0.02
CDKN3-208ENST00000555837 MALP21145 153 aa14.9□□□□□ -0.02
CDKN3-208ENST00000555837 RPL39P62891 51 aaKnown RBP14.9□□□□□ -0.02
CDKN3-208ENST00000555837 FOXI1Q12951 378 aa14.9□□□□□ -0.02
CDKN3-208ENST00000555837 Q6ZN92 141 aa14.9□□□□□ -0.02
CDKN3-208ENST00000555837 PRSS3P2Q8NHM4 247 aa14.9□□□□□ -0.02
CDKN3-208ENST00000555837 LRP1BQ9NZR2 4599 aa14.9□□□□□ -0.02
CDKN3-208ENST00000555837 TRAV13-1A0A0B4J241 112 aa14.89□□□□□ -0.03
CDKN3-208ENST00000555837 APOMO95445 188 aa14.89□□□□□ -0.03
CDKN3-208ENST00000555837 XGP55808 180 aa14.89□□□□□ -0.03
CDKN3-208ENST00000555837 COX7A2LO14548 114 aa14.88□□□□□ -0.03
CDKN3-208ENST00000555837 FABP9Q0Z7S8 132 aa14.88□□□□□ -0.03
CDKN3-208ENST00000555837 Q6ZSA8 131 aa14.88□□□□□ -0.03
CDKN3-208ENST00000555837 Q6ZUT4 128 aa14.88□□□□□ -0.03
CDKN3-208ENST00000555837 IGHV3-64A0A075B6Q5 118 aa14.87□□□□□ -0.03
CDKN3-208ENST00000555837 GVQW2A0A096LPI5 108 aaPredicted RBP14.87□□□□□ -0.03
CDKN3-208ENST00000555837 TMEM141Q96I45 108 aa14.87□□□□□ -0.03
CDKN3-208ENST00000555837 C2orf88Q9BSF0 95 aa14.87□□□□□ -0.03
CDKN3-208ENST00000555837 MRPL18Q9H0U6 180 aaKnown RBP14.87□□□□□ -0.03
CDKN3-208ENST00000555837 FAM229AH3BQW9 127 aa14.86□□□□□ -0.03
CDKN3-208ENST00000555837 ZNF561-AS1K7EIQ3 104 aa14.86□□□□□ -0.03
CDKN3-208ENST00000555837 KIAA1644Q3SXP7 199 aa14.86□□□□□ -0.03
CDKN3-208ENST00000555837 C2orf66Q6UXQ4 117 aa14.86□□□□□ -0.03
CDKN3-208ENST00000555837 HERC2O95714 4834 aa14.85□□□□□ -0.03
CDKN3-208ENST00000555837 IFITM10A6NMD0 228 aa14.85□□□□□ -0.03
CDKN3-208ENST00000555837 TEX43Q6ZNM6 134 aa14.85□□□□□ -0.03
CDKN3-208ENST00000555837 C15orf56Q8N910 161 aa14.85□□□□□ -0.03
CDKN3-208ENST00000555837 DNAH5Q8TE73 4624 aa14.84□□□□□ -0.03
CDKN3-208ENST00000555837 EPM2AB3EWF7 344 aa14.84□□□□□ -0.03
CDKN3-208ENST00000555837 ALKBH7Q9BT30 221 aaPredicted RBP14.84□□□□□ -0.03
CDKN3-208ENST00000555837 SMCO4Q9NRQ5 59 aa14.84□□□□□ -0.03
CDKN3-208ENST00000555837 RNASE13Q5GAN3 156 aaKnown RBP14.83□□□□□ -0.04
CDKN3-208ENST00000555837 TRAPPC1Q9Y5R8 145 aa14.83□□□□□ -0.04
CDKN3-208ENST00000555837 TGIF2-C20orf24A0A0A6YYL0 155 aa14.82□□□□□ -0.04
CDKN3-208ENST00000555837 CHAC1Q9BUX1 264 aa14.82□□□□□ -0.04
CDKN3-208ENST00000555837 VCX2Q9H322 139 aa14.82□□□□□ -0.04
CDKN3-208ENST00000555837 LINC01620Q4KN68 170 aa14.81□□□□□ -0.04
CDKN3-208ENST00000555837 HIGD2BQ4VC39 106 aa14.81□□□□□ -0.04
CDKN3-208ENST00000555837 FA2HQ7L5A8 372 aa14.81□□□□□ -0.04
CDKN3-208ENST00000555837 IGLV4-3A0A075B6K6 122 aa14.8□□□□□ -0.04
CDKN3-208ENST00000555837 SEC11AP67812 179 aa14.8□□□□□ -0.04
CDKN3-208ENST00000555837 FAM30AQ9NZY2 134 aa14.8□□□□□ -0.04
CDKN3-208ENST00000555837 TIMM17AQ99595 171 aa14.79□□□□□ -0.04
CDKN3-208ENST00000555837 RYR1P21817 5038 aa14.79□□□□□ -0.04
CDKN3-208ENST00000555837 F8WDY8 70 aa14.78□□□□□ -0.04
CDKN3-208ENST00000555837 TOMM6Q96B49 74 aa14.78□□□□□ -0.04
CDKN3-208ENST00000555837 RAB5BP61020 215 aa14.77□□□□□ -0.05
CDKN3-208ENST00000555837 SDIM1Q6ZPB5 146 aa14.77□□□□□ -0.05
CDKN3-208ENST00000555837 OR10D4PQ8NGN7 298 aa14.77□□□□□ -0.05
CDKN3-208ENST00000555837 OPRPNQ99935 248 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms