RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, human

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-222	ENST00000555617	CCL25	O15444	150 aa		5.72	□□□□□ -1.49
ABCD4-222	ENST00000555617	OR7C2	O60412	319 aa		5.72	□□□□□ -1.49
ABCD4-222	ENST00000555617	BCE1	O60756	84 aa		5.72	□□□□□ -1.49
ABCD4-222	ENST00000555617	GCG	P01275	180 aa		5.72	□□□□□ -1.49
ABCD4-222	ENST00000555617	S100A4	P26447	101 aa	Known RBP	5.72	□□□□□ -1.49
ABCD4-222	ENST00000555617	GAGE2E	Q4V326	116 aa		5.72	□□□□□ -1.49
ABCD4-222	ENST00000555617	GAGE2D	Q9UEU5	116 aa		5.72	□□□□□ -1.49
ABCD4-222	ENST00000555617	CTXND1	A0A1B0GTU2	59 aa		5.71	□□□□□ -1.5
ABCD4-222	ENST00000555617	CXorf1	O96002	111 aa		5.71	□□□□□ -1.5
ABCD4-222	ENST00000555617	UBE2L3	P68036	154 aa	Known RBP	5.71	□□□□□ -1.5
ABCD4-222	ENST00000555617	ZNF726P1	Q15940	193 aa		5.71	□□□□□ -1.5
ABCD4-222	ENST00000555617	GOLT1A	Q6ZVE7	132 aa		5.71	□□□□□ -1.5
ABCD4-222	ENST00000555617	FAM210A	Q96ND0	272 aa		5.71	□□□□□ -1.5
ABCD4-222	ENST00000555617		M0R381	172 aa		5.7	□□□□□ -1.5
ABCD4-222	ENST00000555617	HMGB3	O15347	200 aa	Known RBP	5.7	□□□□□ -1.5
ABCD4-222	ENST00000555617	ARMS2	P0C7Q2	107 aa		5.7	□□□□□ -1.5
ABCD4-222	ENST00000555617	ARL14EPL	P0DKL9	152 aa		5.7	□□□□□ -1.5
ABCD4-222	ENST00000555617	GCHFR	P30047	84 aa		5.7	□□□□□ -1.5
ABCD4-222	ENST00000555617	RAB4B	P61018	213 aa		5.7	□□□□□ -1.5
ABCD4-222	ENST00000555617	ZNF56	Q15929	161 aa		5.7	□□□□□ -1.5
ABCD4-222	ENST00000555617		Q8NBF4	154 aa		5.7	□□□□□ -1.5
ABCD4-222	ENST00000555617	MBD3L1	Q8WWY6	194 aa		5.7	□□□□□ -1.5
ABCD4-222	ENST00000555617	KRTAP4-9	Q9BYQ8	210 aa		5.7	□□□□□ -1.5
ABCD4-222	ENST00000555617	TMEM167B	Q9NRX6	74 aa		5.7	□□□□□ -1.5
ABCD4-222	ENST00000555617	FHIT	P49789	147 aa		5.69	□□□□□ -1.5
ABCD4-222	ENST00000555617	NKX2-5	P52952	324 aa	Predicted RBP	5.69	□□□□□ -1.5
ABCD4-222	ENST00000555617	C9orf129	Q5T035	196 aa	Known RBP	5.69	□□□□□ -1.5
ABCD4-222	ENST00000555617	C10orf25	Q5T742	122 aa		5.69	□□□□□ -1.5
ABCD4-222	ENST00000555617	OTOR	Q9NRC9	128 aa		5.69	□□□□□ -1.5
ABCD4-222	ENST00000555617	NDUFA12	Q9UI09	145 aa		5.69	□□□□□ -1.5
ABCD4-222	ENST00000555617		A0A1W2PRE2	83 aa		5.68	□□□□□ -1.5
ABCD4-222	ENST00000555617	MAP1LC3B2	A6NCE7	125 aa		5.68	□□□□□ -1.5
ABCD4-222	ENST00000555617	ESD	P10768	282 aa		5.68	□□□□□ -1.5
ABCD4-222	ENST00000555617	GNG5	P63218	68 aa		5.68	□□□□□ -1.5
ABCD4-222	ENST00000555617	FAM74A1	Q5RGS3	127 aa		5.68	□□□□□ -1.5
ABCD4-222	ENST00000555617	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	5.68	□□□□□ -1.5
ABCD4-222	ENST00000555617	OR2D3	Q8NGH3	330 aa		5.68	□□□□□ -1.5
ABCD4-222	ENST00000555617	FAM213B	Q8TBF2	198 aa		5.68	□□□□□ -1.5
ABCD4-222	ENST00000555617	MAP1LC3B	Q9GZQ8	125 aa		5.68	□□□□□ -1.5
ABCD4-222	ENST00000555617	H2AFB1	P0C5Y9	115 aa		5.67	□□□□□ -1.5
ABCD4-222	ENST00000555617	LCE1A	Q5T7P2	110 aa		5.67	□□□□□ -1.5
ABCD4-222	ENST00000555617	SFT2D1	Q8WV19	159 aa		5.67	□□□□□ -1.5
ABCD4-222	ENST00000555617	NKX6-2	Q9C056	277 aa	Predicted RBP	5.67	□□□□□ -1.5
ABCD4-222	ENST00000555617	ARL2-SNX15	V9GYD0	113 aa		5.67	□□□□□ -1.5
ABCD4-222	ENST00000555617	SERTM2	A0A1B0GWG4	89 aa		5.66	□□□□□ -1.5
ABCD4-222	ENST00000555617	GRIFIN	A4D1Z8	144 aa		5.66	□□□□□ -1.5
ABCD4-222	ENST00000555617	SPRR2D	P22532	72 aa		5.66	□□□□□ -1.5
ABCD4-222	ENST00000555617	C4orf48	Q5BLP8	95 aa		5.66	□□□□□ -1.5
ABCD4-222	ENST00000555617	C5orf17	Q8NAS9	161 aa		5.66	□□□□□ -1.5
ABCD4-222	ENST00000555617	CMTM2	Q8TAZ6	248 aa		5.66	□□□□□ -1.5
ABCD4-222	ENST00000555617	C2orf48	Q96LS8	159 aa		5.66	□□□□□ -1.5
ABCD4-222	ENST00000555617	TCEAL7	Q9BRU2	100 aa		5.66	□□□□□ -1.5
ABCD4-222	ENST00000555617	SMDT1	Q9H4I9	107 aa		5.66	□□□□□ -1.5
ABCD4-222	ENST00000555617	LINC00959	A0A1B0GUT2	108 aa		5.65	□□□□□ -1.5
ABCD4-222	ENST00000555617	FAM74A7	A6NL05	159 aa		5.65	□□□□□ -1.5
ABCD4-222	ENST00000555617	TEX46	H3BTG2	121 aa		5.65	□□□□□ -1.5
ABCD4-222	ENST00000555617		M0R036	132 aa		5.65	□□□□□ -1.5
ABCD4-222	ENST00000555617	SUMO1	P63165	101 aa	Known RBP	5.65	□□□□□ -1.5
ABCD4-222	ENST00000555617	EPDR1	Q9UM22	224 aa		5.65	□□□□□ -1.5
ABCD4-222	ENST00000555617	TCRA	P04437	139 aa		5.64	□□□□□ -1.51
ABCD4-222	ENST00000555617	TLX1NB	P0CAT3	122 aa		5.64	□□□□□ -1.51
ABCD4-222	ENST00000555617	KRTAP5-10	Q6L8G5	202 aa		5.64	□□□□□ -1.51
ABCD4-222	ENST00000555617	ALKAL2	Q6UX46	152 aa		5.64	□□□□□ -1.51
ABCD4-222	ENST00000555617	HIST1H2BA	Q96A08	127 aa		5.64	□□□□□ -1.51
ABCD4-222	ENST00000555617	PGLYRP4	Q96LB8	373 aa		5.64	□□□□□ -1.51
ABCD4-222	ENST00000555617	SPRR2F	Q96RM1	72 aa		5.64	□□□□□ -1.51
ABCD4-222	ENST00000555617		K7EQM0	130 aa		5.63	□□□□□ -1.51
ABCD4-222	ENST00000555617	PAGE4	O60829	102 aa		5.63	□□□□□ -1.51
ABCD4-222	ENST00000555617	SPINK1	P00995	79 aa		5.63	□□□□□ -1.51
ABCD4-222	ENST00000555617	UBE2G2	P60604	165 aa		5.63	□□□□□ -1.51
ABCD4-222	ENST00000555617	BLOC1S1	P78537	153 aa		5.63	□□□□□ -1.51
ABCD4-222	ENST00000555617	CCL20	P78556	96 aa		5.63	□□□□□ -1.51
ABCD4-222	ENST00000555617	LCE3B	Q5TA77	95 aa		5.63	□□□□□ -1.51
ABCD4-222	ENST00000555617	TEX261	Q6UWH6	196 aa		5.63	□□□□□ -1.51
ABCD4-222	ENST00000555617	MANBAL	Q9NQG1	85 aa		5.63	□□□□□ -1.51
ABCD4-222	ENST00000555617	C6orf48	Q9UBA6	75 aa		5.63	□□□□□ -1.51
ABCD4-222	ENST00000555617	C22orf24	Q9Y442	160 aa		5.63	□□□□□ -1.51
ABCD4-222	ENST00000555617	HMCN1	Q96RW7	5635 aa		5.63	□□□□□ -1.51
ABCD4-222	ENST00000555617		A0A1B0GV50	99 aa		5.62	□□□□□ -1.51
ABCD4-222	ENST00000555617	PEX7	O00628	323 aa		5.62	□□□□□ -1.51
ABCD4-222	ENST00000555617	UBE2L6	O14933	153 aa		5.62	□□□□□ -1.51
ABCD4-222	ENST00000555617	TAGLN2	P37802	199 aa	Known RBP	5.62	□□□□□ -1.51
ABCD4-222	ENST00000555617	CST9LP1	Q5W188	147 aa		5.62	□□□□□ -1.51
ABCD4-222	ENST00000555617	MRPL35	Q9NZE8	188 aa	Known RBP	5.62	□□□□□ -1.51
ABCD4-222	ENST00000555617		A6NN06	94 aa		5.61	□□□□□ -1.51
ABCD4-222	ENST00000555617	IFNA1	P01562	189 aa		5.61	□□□□□ -1.51
ABCD4-222	ENST00000555617	CTRL	P40313	264 aa		5.61	□□□□□ -1.51
ABCD4-222	ENST00000555617	DNLZ	Q5SXM8	178 aa		5.61	□□□□□ -1.51
ABCD4-222	ENST00000555617	CD164L2	Q6UWJ8	174 aa		5.61	□□□□□ -1.51
ABCD4-222	ENST00000555617	GNG13	Q9P2W3	67 aa		5.61	□□□□□ -1.51
ABCD4-222	ENST00000555617	S100A9	P06702	114 aa	Known RBP	5.6	□□□□□ -1.51
ABCD4-222	ENST00000555617	RPL37	P61927	97 aa	Known RBP	5.6	□□□□□ -1.51
ABCD4-222	ENST00000555617	FLI1	Q01543	452 aa	Predicted RBP	5.6	□□□□□ -1.51
ABCD4-222	ENST00000555617	SAPCD1	Q5SSQ6	148 aa		5.6	□□□□□ -1.51
ABCD4-222	ENST00000555617	COX8C	Q7Z4L0	72 aa		5.6	□□□□□ -1.51
ABCD4-222	ENST00000555617	PRNT	Q86SH4	94 aa		5.6	□□□□□ -1.51
ABCD4-222	ENST00000555617	FAM19A2	Q8N3H0	131 aa		5.6	□□□□□ -1.51
ABCD4-222	ENST00000555617	C11orf52	Q96A22	123 aa		5.6	□□□□□ -1.51
ABCD4-222	ENST00000555617	FMC1	Q96HJ9	113 aa		5.6	□□□□□ -1.51
ABCD4-222	ENST00000555617	NDFIP1	Q9BT67	221 aa		5.6	□□□□□ -1.51

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